Click here to switch to the map view.

The map label for this gene is cas2

Identifier: 170078385

GI number: 170078385

Start: 1864128

End: 1864421

Strand: Direct

Name: cas2

Synonym: SYNPCC7002_A1778

Alternate gene names: NA

Gene position: 1864128-1864421 (Clockwise)

Preceding gene: 170078384

Following gene: 170078386

Centisome position: 61.97

GC content: 43.2

Gene sequence:

>294_bases
ATGGCAGAACTCAAACATTGGTATTTAGTTTGTTATGACATCCGCTCCCAAAAGCGTTGGCGTAAAGCTTATAAGCTCCT
CGAAGGCTATGGGGAACGCATCCAATATTCGATTTTCCGCTGTTGGTTGACTCAGCGATCGCGAGAAAAGTTACGCTGGC
AATTAGAGGAGGTGCTCACCAAGGAGGATGATCTTTTACTTATTCGCTTGTCACAACAATGTGTACAGGATTTACCCAAA
TATAACCGTCCGAATACTTGGCTCTTTGATGAACAGACATTTAAGGTACTCTGA

Upstream 100 bases:

>100_bases
CCCTCAGTTATGCCCGCCTCATTGAGCTAGAGGTGCGGCTCCTCGAAAAAGAATGGTCTGGGGAAGCGGGTCTATTCGGT
CAACTGATTGTGAGGTGATC

Downstream 100 bases:

>100_bases
AATGTTGCAAGCAATGGGGACTGTTTGGGGCGATCGCCTTTTTAAAATCGCTCAAAGAATTGGCTACTGGGCTTTTGCAA
TTTATCAGCAGCGGCTTAGA

Product: CRISPR-associated protein

Products: NA

Alternate protein names: CRISPR-Associated Cas2 Family Protein

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MAELKHWYLVCYDIRSQKRWRKAYKLLEGYGERIQYSIFRCWLTQRSREKLRWQLEEVLTKEDDLLLIRLSQQCVQDLPK
YNRPNTWLFDEQTFKVL

Sequences:

>Translated_97_residues
MAELKHWYLVCYDIRSQKRWRKAYKLLEGYGERIQYSIFRCWLTQRSREKLRWQLEEVLTKEDDLLLIRLSQQCVQDLPK
YNRPNTWLFDEQTFKVL
>Mature_96_residues
AELKHWYLVCYDIRSQKRWRKAYKLLEGYGERIQYSIFRCWLTQRSREKLRWQLEEVLTKEDDLLLIRLSQQCVQDLPKY
NRPNTWLFDEQTFKVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12146; Mature: 12015

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELKHWYLVCYDIRSQKRWRKAYKLLEGYGERIQYSIFRCWLTQRSREKLRWQLEEVLT
CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEDDLLLIRLSQQCVQDLPKYNRPNTWLFDEQTFKVL
CCCCEEEEHHHHHHHHHCCCCCCCCCEEECCCCEECC
>Mature Secondary Structure 
AELKHWYLVCYDIRSQKRWRKAYKLLEGYGERIQYSIFRCWLTQRSREKLRWQLEEVLT
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEDDLLLIRLSQQCVQDLPKYNRPNTWLFDEQTFKVL
CCCCEEEEHHHHHHHHHCCCCCCCCCEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA