| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is devS [H]
Identifier: 170078383
GI number: 170078383
Start: 1861754
End: 1862386
Strand: Direct
Name: devS [H]
Synonym: SYNPCC7002_A1776
Alternate gene names: 170078383
Gene position: 1861754-1862386 (Clockwise)
Preceding gene: 170078382
Following gene: 170078384
Centisome position: 61.89
GC content: 45.81
Gene sequence:
>633_bases ATGGAAATACTTTATTTAGAGTGCCCCTGTACCAGTTTCCCTCGAAGCTTTGCACGGGACTACAAAGAAACCTATCTCTA CCCACCACCATCAACGATCTATGGCTTTCTATTATCCCTAGTCGGTGAGGAAGATTTAACCGCCCATCTAGGGGTAAAAA TTGCCATTGGTCTCATTGGTGATGCACCAACCGTCTCTCGCATTGTTCGCAAACAACGTCACCACAAATTTAGTAAAACT CACATGGGAACCTATCCCAGCAGTAAATTTTCTAAGCCGAATCATCAGGAATTACTGACAGATTTAAAGGTTGCCCTGCG GCTAGATTCCGCTGAAGAAACAGCTAAGGTAAACCTTGCCGAAAGAGTGGCGATCGCCCTCTCTAGTCCAGAGAAGATCG CCCGATTTGGAGGCTTATCACTAGGCGAATCTTGGGCAATGGCCAATGGCGTTCGTCCCTATCGACTGGATGATGGGGAT ATTCGTTGGCTGATAACTGATAACCGTGGTTTGATTGGTCTGCCGATTTGGATTGACCGAAAAACAACCAGAGGAACATT TCAGCGGTTTACCCTAGAACAAGGTGGCATGTTTCATGAGAAAGCTTGGGTCACAATCAAGTGTGATAACTAA
Upstream 100 bases:
>100_bases ACCTGTTTAACCTACCAAACTTCTCTGGTGTCCAAAGATTCTCTAAGTCAACAATGGGGACAGTTAGAAGTGATTTGGTA ATTTTTGAGATGAAAAAATA
Downstream 100 bases:
>100_bases CGTGTTTTTTTTAAGTAGGAAAGATTATTGCCGGGGTGATTTTTCAAAATACATTTAATAACTTTTTTGAGGTTCATTAA ATGTTTGCTCCGGTTATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MEILYLECPCTSFPRSFARDYKETYLYPPPSTIYGFLLSLVGEEDLTAHLGVKIAIGLIGDAPTVSRIVRKQRHHKFSKT HMGTYPSSKFSKPNHQELLTDLKVALRLDSAEETAKVNLAERVAIALSSPEKIARFGGLSLGESWAMANGVRPYRLDDGD IRWLITDNRGLIGLPIWIDRKTTRGTFQRFTLEQGGMFHEKAWVTIKCDN
Sequences:
>Translated_210_residues MEILYLECPCTSFPRSFARDYKETYLYPPPSTIYGFLLSLVGEEDLTAHLGVKIAIGLIGDAPTVSRIVRKQRHHKFSKT HMGTYPSSKFSKPNHQELLTDLKVALRLDSAEETAKVNLAERVAIALSSPEKIARFGGLSLGESWAMANGVRPYRLDDGD IRWLITDNRGLIGLPIWIDRKTTRGTFQRFTLEQGGMFHEKAWVTIKCDN >Mature_210_residues MEILYLECPCTSFPRSFARDYKETYLYPPPSTIYGFLLSLVGEEDLTAHLGVKIAIGLIGDAPTVSRIVRKQRHHKFSKT HMGTYPSSKFSKPNHQELLTDLKVALRLDSAEETAKVNLAERVAIALSSPEKIARFGGLSLGESWAMANGVRPYRLDDGD IRWLITDNRGLIGLPIWIDRKTTRGTFQRFTLEQGGMFHEKAWVTIKCDN
Specific function: Has a role in fruiting body development, sporulation and aggregation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013422 - InterPro: IPR013415 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23715; Mature: 23715
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEILYLECPCTSFPRSFARDYKETYLYPPPSTIYGFLLSLVGEEDLTAHLGVKIAIGLIG CEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECCCEEEEEEECC DAPTVSRIVRKQRHHKFSKTHMGTYPSSKFSKPNHQELLTDLKVALRLDSAEETAKVNLA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHH ERVAIALSSPEKIARFGGLSLGESWAMANGVRPYRLDDGDIRWLITDNRGLIGLPIWIDR HEEEEEECCHHHHHHHCCCCCCCCHHHHCCCCCEEECCCCEEEEEECCCCEEEEEEEEEC KTTRGTFQRFTLEQGGMFHEKAWVTIKCDN CCCCCHHHEEEHHCCCEEEEEEEEEEEECC >Mature Secondary Structure MEILYLECPCTSFPRSFARDYKETYLYPPPSTIYGFLLSLVGEEDLTAHLGVKIAIGLIG CEEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECCCEEEEEEECC DAPTVSRIVRKQRHHKFSKTHMGTYPSSKFSKPNHQELLTDLKVALRLDSAEETAKVNLA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCHHHHHHHHH ERVAIALSSPEKIARFGGLSLGESWAMANGVRPYRLDDGDIRWLITDNRGLIGLPIWIDR HEEEEEECCHHHHHHHCCCCCCCCHHHHCCCCCEEECCCCEEEEEECCCCEEEEEEEEEC KTTRGTFQRFTLEQGGMFHEKAWVTIKCDN CCCCCHHHEEEHHCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7693658 [H]