Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078361

Identifier: 170078361

GI number: 170078361

Start: 1839989

End: 1841245

Strand: Direct

Name: 170078361

Synonym: SYNPCC7002_A1754

Alternate gene names: NA

Gene position: 1839989-1841245 (Clockwise)

Preceding gene: 170078359

Following gene: 170078363

Centisome position: 61.17

GC content: 40.65

Gene sequence:

>1257_bases
GTGCTTAATGTTCAAGAGTGCGAACAAATTATCTCGGAAATTGAATATAAACAGGATATTCGCAAGTATCCAGATAATCT
CCGTAGAGGGCAATTCAAATCAGGTTGGGAAGATGCAGTTATTCGTCAACGGATTTATTCGCCAATCACTCTTCAAAGAC
TAACTTGGCGTAACTTGGGCTATCGGACAGGAGTACGTTTTGGTGATAAGTCAGTAGATGAGATCAATCGGATTTTTGAA
CTGTTTGCCCGACATTACAAAAGCGTAAGAGGTATTGACCCTTCATCTTGGCAAAGTGACATAGAGCAATGGGTCGCAAA
ACATCGAAAACTACCTAACACCCTAAGTAGAGACTTAGTAAGATTTTTTGATCTAGTTTTTGAACATACGCAGCATCCAG
ATGAAGCGTGGTTTGGAGTTCATGAACAAACAGTGAGCTTAGTGGTGGGTGGCATATTTTTGGCTGCAATCAATCTGTCT
AATCCTGATTATGGTATTTGGGTGCTTTTAGACCAAAATCCGGTAGTCATTCCTAAAGTTGATTATAAGCCTGTTAAATC
TACGCAAAAGTACGATCCTCTTACTTGGGCACATCTAGATGATATTACAGATGTTAGTGCCTTGCTTGAAAGTTCTGAAT
TTTGGTTGTCTTACTCAAACGCATCCACCAAAATTCTAAATTCACCAATTTCCCGTACTCGTAGTGTAGAGTTTCAGCAA
AGCAGACATAAACGTCGCCTAAACAAGTTTTGGAGTAATCAGCTTGAGAATCAGGATGACCTAGCGGAGTTGCGAGACGA
GCGACAAAGAATTGAAGCAGAAGGATACTTTAACGTTGAGAATCTAGAGGATGCAAGAAGAAGAGTCACAGCTTCTATTG
TGCAACGCCAAGGGCAATCTGAGTTTCGTCGTAAGCTACTTACTGCTTATGCTGGTCGGTGCGCTATTTCTGGCTGTGAT
GCAGAACCAGCAATAGAAGCGGCGCATATCTTTCCCTATCAAGGTACTCAAACTAATCACATCACAAATGGGTTACCACT
AAGAGCGGATATACACACTTTATTTGATCTATATTTGCTATCGGTTCAGCCAGATACTTATGAAGTAATAGTTGCCCCAG
AACTTATTGAAACCTGTTATCAGGAACTTTTTGGTAAGAAGCTCATTTTGCCAAAGGATACGTTTGCATTACCTAATAGC
GAGGCACTCAGAAAGCATTATGAAAACTTCTTGCAGAAGCATAATCAGGGAGAGTAG

Upstream 100 bases:

>100_bases
ATAAAAGTGCTATGAGGCATTTTAGATGGACTTTTTCCGCATAATCACTAGTTAGGTTGCTTAAAATATCGGTGAGGACA
TAGCGAGAGGTTGTCTGGTG

Downstream 100 bases:

>100_bases
CCGCAACCTAACACATCACGGTAGCGGACGGACGAAAGCCACTGGTGCTTAGTTCGATGTTATCTGCCGCCGCTGCGTTT
TGCCGTTAACATTACAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MLNVQECEQIISEIEYKQDIRKYPDNLRRGQFKSGWEDAVIRQRIYSPITLQRLTWRNLGYRTGVRFGDKSVDEINRIFE
LFARHYKSVRGIDPSSWQSDIEQWVAKHRKLPNTLSRDLVRFFDLVFEHTQHPDEAWFGVHEQTVSLVVGGIFLAAINLS
NPDYGIWVLLDQNPVVIPKVDYKPVKSTQKYDPLTWAHLDDITDVSALLESSEFWLSYSNASTKILNSPISRTRSVEFQQ
SRHKRRLNKFWSNQLENQDDLAELRDERQRIEAEGYFNVENLEDARRRVTASIVQRQGQSEFRRKLLTAYAGRCAISGCD
AEPAIEAAHIFPYQGTQTNHITNGLPLRADIHTLFDLYLLSVQPDTYEVIVAPELIETCYQELFGKKLILPKDTFALPNS
EALRKHYENFLQKHNQGE

Sequences:

>Translated_418_residues
MLNVQECEQIISEIEYKQDIRKYPDNLRRGQFKSGWEDAVIRQRIYSPITLQRLTWRNLGYRTGVRFGDKSVDEINRIFE
LFARHYKSVRGIDPSSWQSDIEQWVAKHRKLPNTLSRDLVRFFDLVFEHTQHPDEAWFGVHEQTVSLVVGGIFLAAINLS
NPDYGIWVLLDQNPVVIPKVDYKPVKSTQKYDPLTWAHLDDITDVSALLESSEFWLSYSNASTKILNSPISRTRSVEFQQ
SRHKRRLNKFWSNQLENQDDLAELRDERQRIEAEGYFNVENLEDARRRVTASIVQRQGQSEFRRKLLTAYAGRCAISGCD
AEPAIEAAHIFPYQGTQTNHITNGLPLRADIHTLFDLYLLSVQPDTYEVIVAPELIETCYQELFGKKLILPKDTFALPNS
EALRKHYENFLQKHNQGE
>Mature_418_residues
MLNVQECEQIISEIEYKQDIRKYPDNLRRGQFKSGWEDAVIRQRIYSPITLQRLTWRNLGYRTGVRFGDKSVDEINRIFE
LFARHYKSVRGIDPSSWQSDIEQWVAKHRKLPNTLSRDLVRFFDLVFEHTQHPDEAWFGVHEQTVSLVVGGIFLAAINLS
NPDYGIWVLLDQNPVVIPKVDYKPVKSTQKYDPLTWAHLDDITDVSALLESSEFWLSYSNASTKILNSPISRTRSVEFQQ
SRHKRRLNKFWSNQLENQDDLAELRDERQRIEAEGYFNVENLEDARRRVTASIVQRQGQSEFRRKLLTAYAGRCAISGCD
AEPAIEAAHIFPYQGTQTNHITNGLPLRADIHTLFDLYLLSVQPDTYEVIVAPELIETCYQELFGKKLILPKDTFALPNS
EALRKHYENFLQKHNQGE

Specific function: Unknown

COG id: COG3440

COG function: function code V; Predicted restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48688; Mature: 48688

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNVQECEQIISEIEYKQDIRKYPDNLRRGQFKSGWEDAVIRQRIYSPITLQRLTWRNLG
CCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
YRTGVRFGDKSVDEINRIFELFARHYKSVRGIDPSSWQSDIEQWVAKHRKLPNTLSRDLV
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
RFFDLVFEHTQHPDEAWFGVHEQTVSLVVGGIFLAAINLSNPDYGIWVLLDQNPVVIPKV
HHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCEEEECC
DYKPVKSTQKYDPLTWAHLDDITDVSALLESSEFWLSYSNASTKILNSPISRTRSVEFQQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHCHHHHH
SRHKRRLNKFWSNQLENQDDLAELRDERQRIEAEGYFNVENLEDARRRVTASIVQRQGQS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHH
EFRRKLLTAYAGRCAISGCDAEPAIEAAHIFPYQGTQTNHITNGLPLRADIHTLFDLYLL
HHHHHHHHHHHCCCEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SVQPDTYEVIVAPELIETCYQELFGKKLILPKDTFALPNSEALRKHYENFLQKHNQGE
EECCCCEEEEECHHHHHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLNVQECEQIISEIEYKQDIRKYPDNLRRGQFKSGWEDAVIRQRIYSPITLQRLTWRNLG
CCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
YRTGVRFGDKSVDEINRIFELFARHYKSVRGIDPSSWQSDIEQWVAKHRKLPNTLSRDLV
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
RFFDLVFEHTQHPDEAWFGVHEQTVSLVVGGIFLAAINLSNPDYGIWVLLDQNPVVIPKV
HHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCCEEEECC
DYKPVKSTQKYDPLTWAHLDDITDVSALLESSEFWLSYSNASTKILNSPISRTRSVEFQQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHCHHHHH
SRHKRRLNKFWSNQLENQDDLAELRDERQRIEAEGYFNVENLEDARRRVTASIVQRQGQS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHH
EFRRKLLTAYAGRCAISGCDAEPAIEAAHIFPYQGTQTNHITNGLPLRADIHTLFDLYLL
HHHHHHHHHHHCCCEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SVQPDTYEVIVAPELIETCYQELFGKKLILPKDTFALPNSEALRKHYENFLQKHNQGE
EECCCCEEEEECHHHHHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA