Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078346

Identifier: 170078346

GI number: 170078346

Start: 1826547

End: 1827803

Strand: Direct

Name: 170078346

Synonym: SYNPCC7002_A1739

Alternate gene names: NA

Gene position: 1826547-1827803 (Clockwise)

Preceding gene: 170078343

Following gene: 170078348

Centisome position: 60.72

GC content: 51.55

Gene sequence:

>1257_bases
ATGAATTTAGATGTGATTGTCGAGTTGGCGATCGCCTTAGCCTTGGGGGTGATTATTGGCCTAGAACGGGGCTGGCGCAA
CCGGGCCGACGATGAGGGTTACGGCGATAGCGGCCTCCGCAATTTTTCAATTTGTGGCTTACTAGGGGGAATTGCCGCTT
TACTGGCGCAAAGTTGGGGATTTGGTATTCTTGTCGGCATTTTCCTCGGTTTAGCGGGTTTGGTGGCCACCTCCTACGTT
TTAACCGCGAAAAAATCCGGTGATTATGGCAGCACGACAGAATTGGCCTTAATGATCACCTTTTGTCTGGGAGCCTTGGC
CTTGAGTGGCTTTACCCAAGAGGCGATCGCCGTGGCGGTGGTGGTGGCCTGGATCCTAGGGGCAAAACCGGAACTCACAA
AAACCCTCAATTGGCTCCAGCGCCAGGAATTAATTGCAACTCTCCAACTACTGCTGATTGCGGTGGTCGTGTTACCCCTT
CTGCCCAACCAAGCCATGGGGCCATGGAATGCTCTTAATCCACGGGCGATCGGTTGGCTAGTGTTGTTAATTGCAGGCAT
TTCCTACATTGGTTACTTTGCGATTCGCATTTTAGGTAGTCAAGTCGGGCTGATGTTAACGGGCTTTTTTGGGGGGATTG
CTTCCTCCACTGCCTTGACGGTTTCCTTTTCTCGCATGGCCAAACAACAACCCAGCGAAACCATTTCCCTTGCGGCTGGC
ATTGTCCTTGCCAATGGCATTATGGCCCCTCGTTTGTTGTTGGTGATTGCTGTAGTCAGTCAAACTCTGGCCTACAAGTT
GGCGGCTCCTTTATTAATTTTGGGTTTGATTCCTGTGATTGCCGCAGTGGCGATCGCCCGTTGGAAAACCCAACCCCAGG
ACAGACCCGCCGCCGAAGTGAGCGTGAATAATCCCGTTGAACTCGGTTCCGCAATTCAATACACCGCTCTCCTGGTGGTT
TTATCCCTGTTGGTGCGGTGGGCCCAGGAAGAATTTGGTGAACAGGGGATTTATCTCCTCTCTGCCCTGTCTGGCTTTGC
CGATGTCGATGCCGTGAGTTTATCCCTCGCCAACGCGGTACAAGACGACCTTCCCGAAAAAGTTGCCATGTATGGTATTT
GGTTAGCCGTAACAGCCAACACCCTTGTCAAAGTCGGCTTTACTCGGACGATTGGGAATCCCAAACTCGCCTATTGGTGC
GGCAGCATTATGTTGAGTGGTTTAATTGCCGGTTTTTTGGTATTGTTAGCAGTCTGA

Upstream 100 bases:

>100_bases
CGAGCTATGCTAACCGAAATTGGCGGCTGTTTCAGGCGTTTTTTAAATTTTTGTGACCCCTAAATGTGGGTAAGCTAAGG
TTGAAAATTTGAGGAATGCG

Downstream 100 bases:

>100_bases
GTGAAATATTTTTTCCCATCAAGATTCACGAGCCTTTTGAATACCCCCTTTGGAGGTGGTGTACGGGACTTTAACTAAAG
AATCAGCTTTATTGGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNLDVIVELAIALALGVIIGLERGWRNRADDEGYGDSGLRNFSICGLLGGIAALLAQSWGFGILVGIFLGLAGLVATSYV
LTAKKSGDYGSTTELALMITFCLGALALSGFTQEAIAVAVVVAWILGAKPELTKTLNWLQRQELIATLQLLLIAVVVLPL
LPNQAMGPWNALNPRAIGWLVLLIAGISYIGYFAIRILGSQVGLMLTGFFGGIASSTALTVSFSRMAKQQPSETISLAAG
IVLANGIMAPRLLLVIAVVSQTLAYKLAAPLLILGLIPVIAAVAIARWKTQPQDRPAAEVSVNNPVELGSAIQYTALLVV
LSLLVRWAQEEFGEQGIYLLSALSGFADVDAVSLSLANAVQDDLPEKVAMYGIWLAVTANTLVKVGFTRTIGNPKLAYWC
GSIMLSGLIAGFLVLLAV

Sequences:

>Translated_418_residues
MNLDVIVELAIALALGVIIGLERGWRNRADDEGYGDSGLRNFSICGLLGGIAALLAQSWGFGILVGIFLGLAGLVATSYV
LTAKKSGDYGSTTELALMITFCLGALALSGFTQEAIAVAVVVAWILGAKPELTKTLNWLQRQELIATLQLLLIAVVVLPL
LPNQAMGPWNALNPRAIGWLVLLIAGISYIGYFAIRILGSQVGLMLTGFFGGIASSTALTVSFSRMAKQQPSETISLAAG
IVLANGIMAPRLLLVIAVVSQTLAYKLAAPLLILGLIPVIAAVAIARWKTQPQDRPAAEVSVNNPVELGSAIQYTALLVV
LSLLVRWAQEEFGEQGIYLLSALSGFADVDAVSLSLANAVQDDLPEKVAMYGIWLAVTANTLVKVGFTRTIGNPKLAYWC
GSIMLSGLIAGFLVLLAV
>Mature_418_residues
MNLDVIVELAIALALGVIIGLERGWRNRADDEGYGDSGLRNFSICGLLGGIAALLAQSWGFGILVGIFLGLAGLVATSYV
LTAKKSGDYGSTTELALMITFCLGALALSGFTQEAIAVAVVVAWILGAKPELTKTLNWLQRQELIATLQLLLIAVVVLPL
LPNQAMGPWNALNPRAIGWLVLLIAGISYIGYFAIRILGSQVGLMLTGFFGGIASSTALTVSFSRMAKQQPSETISLAAG
IVLANGIMAPRLLLVIAVVSQTLAYKLAAPLLILGLIPVIAAVAIARWKTQPQDRPAAEVSVNNPVELGSAIQYTALLVV
LSLLVRWAQEEFGEQGIYLLSALSGFADVDAVSLSLANAVQDDLPEKVAMYGIWLAVTANTLVKVGFTRTIGNPKLAYWC
GSIMLSGLIAGFLVLLAV

Specific function: Unknown

COG id: COG3174

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To P.aeruginosa PA0043 and M.thermoautotrophicum MTH1451 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44017; Mature: 44017

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDVIVELAIALALGVIIGLERGWRNRADDEGYGDSGLRNFSICGLLGGIAALLAQSWG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
FGILVGIFLGLAGLVATSYVLTAKKSGDYGSTTELALMITFCLGALALSGFTQEAIAVAV
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VVAWILGAKPELTKTLNWLQRQELIATLQLLLIAVVVLPLLPNQAMGPWNALNPRAIGWL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
VLLIAGISYIGYFAIRILGSQVGLMLTGFFGGIASSTALTVSFSRMAKQQPSETISLAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH
IVLANGIMAPRLLLVIAVVSQTLAYKLAAPLLILGLIPVIAAVAIARWKTQPQDRPAAEV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
SVNNPVELGSAIQYTALLVVLSLLVRWAQEEFGEQGIYLLSALSGFADVDAVSLSLANAV
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHH
QDDLPEKVAMYGIWLAVTANTLVKVGFTRTIGNPKLAYWCGSIMLSGLIAGFLVLLAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNLDVIVELAIALALGVIIGLERGWRNRADDEGYGDSGLRNFSICGLLGGIAALLAQSWG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
FGILVGIFLGLAGLVATSYVLTAKKSGDYGSTTELALMITFCLGALALSGFTQEAIAVAV
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VVAWILGAKPELTKTLNWLQRQELIATLQLLLIAVVVLPLLPNQAMGPWNALNPRAIGWL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
VLLIAGISYIGYFAIRILGSQVGLMLTGFFGGIASSTALTVSFSRMAKQQPSETISLAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH
IVLANGIMAPRLLLVIAVVSQTLAYKLAAPLLILGLIPVIAAVAIARWKTQPQDRPAAEV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
SVNNPVELGSAIQYTALLVVLSLLVRWAQEEFGEQGIYLLSALSGFADVDAVSLSLANAV
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHH
QDDLPEKVAMYGIWLAVTANTLVKVGFTRTIGNPKLAYWCGSIMLSGLIAGFLVLLAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]