| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yhiI [H]
Identifier: 170078330
GI number: 170078330
Start: 1810284
End: 1811525
Strand: Reverse
Name: yhiI [H]
Synonym: SYNPCC7002_A1723
Alternate gene names: 170078330
Gene position: 1811525-1810284 (Counterclockwise)
Preceding gene: 170078339
Following gene: 170078329
Centisome position: 60.22
GC content: 53.62
Gene sequence:
>1242_bases ATGACTGCCGCCACAACGACCCAAAACAAAGGCATTCCAAAATTTTTTAAAATTGCGCTGCCCATTGTGCTGGTGGGGGG ATTGGGCGTTGGTCTTGTAAATTATTTCCTCCGTCCGGAACCCACCCAAGGCATCGAACTCAGTGGCAGAATCGAAGGCT ATGAAACGAATATTAGCGCCAAGGTGGGCGGGAAAGTAGAGGCGATCGCCGTGCGGGAAGGAGATACGGTACAAAAGGGG CAAGTTATCGTCACCCTCGACAGTGCGGAATTGCAAGCATCCCTTGATGGCGCCCAGGCACGGATTAACGCTGCCCAGCA ACAGGTGAACCAAGCCCAACTGCAAATTACCGTCATCGAAAACCAGATCACCGAAGCCCAACTCACCCAACGGCAAGCCC AGGACGACACCGCCGGACGGGTCAATGCTGCCCAAGCCAATGTTGCCGCCGCGAAAGCCCAACTCGCCCAAGCCCAAGCT CAGGTGAAACAACTTGAAGCTGAACTCGCCCTTGCCAAAGCCGATGGCGATCGCTTTCAAGAATTGTACGCATCCGGTGT GGTGTCTAAACAGCGTTTAGAACAGGCCCAAACCCAATATTTATCGACGAAGGAAAACCTCGATGCCCGCCGTGCCGTGG TGGCTGCCGCCGCTGAACAGGTTAAAACCGCCGAGGGAAATCTCACCCAAACCCAAGCCAGCCAATTTAACCCCGATATC CGTGCGGTGCAAGTGCAACGGCTCCAAACCCAACTTGTCCAAGCTCAAGCTCAACTTAGTGCCGCCCAAGCCCAAGTGCA AAATGCCCAAGCCAATTACAACGAAATTGCCGCGAAACTCCAGGATTTAGAATTGGTCAGTCCCATCGATGGGGTGGTGT TAACGCGCACCGCCGAACCGGGGGAAGTGGTGGCAACGGGAAAAACCCTGTTAACCCTAGTGAATTTGGGGGATGTGTAT CTACGGGGCTTTATTCCTGAAAAAGAGGTGGGGGCGATTCAAATTGGGCAGGCGGCAGCGGTGTTTTTGGACTCTGCGCC GGAGGAACCTTTACGGGCAACGGTGGCGGCAATTGATACGGAGGCTTCCTTTACGCCGGAGAATATTTATTTTCGGGATG ATCGGGTGACCCAGGTGTTCGGTTTGAAATTGCAGATTGAAAATGAAGCGGGTTTTGCGAAACCGGGAATGCCTGCAGAT GCGACGATTTTGACGGATGAGACCCAAAATGTGCAGCGATAG
Upstream 100 bases:
>100_bases TGGCAATTTGTCGAAATACTACGTGCTGAGCCATCCCCCGGCGTATCCCTTCCATAATGAAAGGTAGTTAGATTAACGAC GAAAATCTCCTAGAAATGTG
Downstream 100 bases:
>100_bases TGATGATGACAGCGACGAGCAATCATTCAACTTTTAGCAACGGGTTACGCTACGGGGAAACGACGATTCAGGTGGCGGGA CTGCGGAAAGACTATGGCGC
Product: HlyD family secretion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MTAATTTQNKGIPKFFKIALPIVLVGGLGVGLVNYFLRPEPTQGIELSGRIEGYETNISAKVGGKVEAIAVREGDTVQKG QVIVTLDSAELQASLDGAQARINAAQQQVNQAQLQITVIENQITEAQLTQRQAQDDTAGRVNAAQANVAAAKAQLAQAQA QVKQLEAELALAKADGDRFQELYASGVVSKQRLEQAQTQYLSTKENLDARRAVVAAAAEQVKTAEGNLTQTQASQFNPDI RAVQVQRLQTQLVQAQAQLSAAQAQVQNAQANYNEIAAKLQDLELVSPIDGVVLTRTAEPGEVVATGKTLLTLVNLGDVY LRGFIPEKEVGAIQIGQAAAVFLDSAPEEPLRATVAAIDTEASFTPENIYFRDDRVTQVFGLKLQIENEAGFAKPGMPAD ATILTDETQNVQR
Sequences:
>Translated_413_residues MTAATTTQNKGIPKFFKIALPIVLVGGLGVGLVNYFLRPEPTQGIELSGRIEGYETNISAKVGGKVEAIAVREGDTVQKG QVIVTLDSAELQASLDGAQARINAAQQQVNQAQLQITVIENQITEAQLTQRQAQDDTAGRVNAAQANVAAAKAQLAQAQA QVKQLEAELALAKADGDRFQELYASGVVSKQRLEQAQTQYLSTKENLDARRAVVAAAAEQVKTAEGNLTQTQASQFNPDI RAVQVQRLQTQLVQAQAQLSAAQAQVQNAQANYNEIAAKLQDLELVSPIDGVVLTRTAEPGEVVATGKTLLTLVNLGDVY LRGFIPEKEVGAIQIGQAAAVFLDSAPEEPLRATVAAIDTEASFTPENIYFRDDRVTQVFGLKLQIENEAGFAKPGMPAD ATILTDETQNVQR >Mature_412_residues TAATTTQNKGIPKFFKIALPIVLVGGLGVGLVNYFLRPEPTQGIELSGRIEGYETNISAKVGGKVEAIAVREGDTVQKGQ VIVTLDSAELQASLDGAQARINAAQQQVNQAQLQITVIENQITEAQLTQRQAQDDTAGRVNAAQANVAAAKAQLAQAQAQ VKQLEAELALAKADGDRFQELYASGVVSKQRLEQAQTQYLSTKENLDARRAVVAAAAEQVKTAEGNLTQTQASQFNPDIR AVQVQRLQTQLVQAQAQLSAAQAQVQNAQANYNEIAAKLQDLELVSPIDGVVLTRTAEPGEVVATGKTLLTLVNLGDVYL RGFIPEKEVGAIQIGQAAAVFLDSAPEEPLRATVAAIDTEASFTPENIYFRDDRVTQVFGLKLQIENEAGFAKPGMPADA TILTDETQNVQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789900, Length=400, Percent_Identity=29, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1787013, Length=364, Percent_Identity=27.7472527472527, Blast_Score=99, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 44154; Mature: 44023
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAATTTQNKGIPKFFKIALPIVLVGGLGVGLVNYFLRPEPTQGIELSGRIEGYETNISA CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEECEECCEEE KVGGKVEAIAVREGDTVQKGQVIVTLDSAELQASLDGAQARINAAQQQVNQAQLQITVIE EECCEEEEEEEECCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEEC NQITEAQLTQRQAQDDTAGRVNAAQANVAAAKAQLAQAQAQVKQLEAELALAKADGDRFQ CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ELYASGVVSKQRLEQAQTQYLSTKENLDARRAVVAAAAEQVKTAEGNLTQTQASQFNPDI HHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCH RAVQVQRLQTQLVQAQAQLSAAQAQVQNAQANYNEIAAKLQDLELVSPIDGVVLTRTAEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCC GEVVATGKTLLTLVNLGDVYLRGFIPEKEVGAIQIGQAAAVFLDSAPEEPLRATVAAIDT CCEEECCHHHEEHHHCCHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCHHHHHHHEEEC EASFTPENIYFRDDRVTQVFGLKLQIENEAGFAKPGMPADATILTDETQNVQR CCCCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure TAATTTQNKGIPKFFKIALPIVLVGGLGVGLVNYFLRPEPTQGIELSGRIEGYETNISA CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEECEECCEEE KVGGKVEAIAVREGDTVQKGQVIVTLDSAELQASLDGAQARINAAQQQVNQAQLQITVIE EECCEEEEEEEECCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEEC NQITEAQLTQRQAQDDTAGRVNAAQANVAAAKAQLAQAQAQVKQLEAELALAKADGDRFQ CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ELYASGVVSKQRLEQAQTQYLSTKENLDARRAVVAAAAEQVKTAEGNLTQTQASQFNPDI HHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCH RAVQVQRLQTQLVQAQAQLSAAQAQVQNAQANYNEIAAKLQDLELVSPIDGVVLTRTAEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCC GEVVATGKTLLTLVNLGDVYLRGFIPEKEVGAIQIGQAAAVFLDSAPEEPLRATVAAIDT CCEEECCHHHEEHHHCCHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCHHHHHHHEEEC EASFTPENIYFRDDRVTQVFGLKLQIENEAGFAKPGMPADATILTDETQNVQR CCCCCCCCEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]