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The map label for this gene is ybhR [H]

Identifier: 170078327

GI number: 170078327

Start: 1806069

End: 1807199

Strand: Reverse

Name: ybhR [H]

Synonym: SYNPCC7002_A1720

Alternate gene names: 170078327

Gene position: 1807199-1806069 (Counterclockwise)

Preceding gene: 170078328

Following gene: 170078323

Centisome position: 60.08

GC content: 42.26

Gene sequence:

>1131_bases
ATGAAAATCAATTTATTACAACGTTTTTTTGATGGTCGCTTCTGGGCTTTAGTCCTAAAAGAAATCCGGCAAATCCTTAA
AAATCGTCAATCTATTTTTCTCCTTATTTTTCCGCCGACAATTCAATTATTAGTTTTTGGTTTAGCCCTCAGTCCCAATG
TTGACCATCTCAGTTTAGGTTTGGTTGATTATGCTAACTCTGGCCAAAGTCGTGAATTTGTTTCGGCACTGGTTGAAAAT
GATATTTTTCAAATTGCTGCGACCCCAAAAAATGAAGCCCAATTGCAACAACAGGTGCGCAACGGCCAATTAATTGCCGG
GTTGATTATTCCTCCAGACTTTGATCGGGACTTAAATCGGGGAAATTCTACCTTCGTGCAAGTTTTTATTGATGGAGTAG
ATGCCAATACCGCCGGGATTACCCGTGGCTACCTCCAGCAAATTATTAATGCTTATAATCGCCAACAAAATCCTCAATTT
TCTACCTTGCCCATCGAAACCCAAAGTCGTTTTTTATATAATCCGGGTTTGATCAGTAGTTGGTTTTTCGTACCGGGGGT
AATTGGGGTAGTGTTAACGTTAACGGGATCTTTGATTTCTTCGGTCACAGTGATCCGGGAAAAAGACGTGGGAACATTAG
AGCAATTATTAATGACGCCTGCTTCGGGCTGGGAAATTTTGTTAGCAAAAATTGTGCCGCTATTTGTCTTATTAATGGGG
GATGTTTTAATTGCGGCGGCGATGGGAAAATTTATTTTTAATTTACCTTTTCGGGGGAATTTTTTGATTTTTTATGGTCT
TTCTGGATTGTATGTTTTTGTCAGTATTGGTTTAGGCATTTTACTCGCCACGTTATCCCGTACCCAACAACAGGTCGTCT
TAACGTCGTTCTTTTTTAATGCGCCGATTATTCAGCTTTCTGGGGCGATCGCCCCGATTGAGAGTATGCCGACATTTTTC
CAGATTCTCTCGTGGTTTGACCCGCTGCGCCATTATGTGGCGATCGCCCGGAGCTTAATTCTCAAAGGGGTGGCGATTGA
CTCCCTGTGGCCGAATATTTTCGCCCTGTGCGGTTTTGCGATTATTTTGTTGTCGGTGAGTGTCAGTCGCTTTCGGGCGC
AGTTGAATTGA

Upstream 100 bases:

>100_bases
TGGTATGTGCCGATCATTGTTAGCATCATGGGCTTAGTCCTCTTTAAAGCTGCTACAAAAACCATGGAAAAAATGCAGTT
TTCGGAGTGAATTTGACACG

Downstream 100 bases:

>100_bases
GGGCTGACCAGCGTTTTTTCCAGTGGCTCGTGGATTCTCGCTGGCTAGATTGTTGTTCCTCCCGTCGCCGTTGCAAAATT
GTTGCTGCATCGTCTTGGAG

Product: ABC-2 type transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKINLLQRFFDGRFWALVLKEIRQILKNRQSIFLLIFPPTIQLLVFGLALSPNVDHLSLGLVDYANSGQSREFVSALVEN
DIFQIAATPKNEAQLQQQVRNGQLIAGLIIPPDFDRDLNRGNSTFVQVFIDGVDANTAGITRGYLQQIINAYNRQQNPQF
STLPIETQSRFLYNPGLISSWFFVPGVIGVVLTLTGSLISSVTVIREKDVGTLEQLLMTPASGWEILLAKIVPLFVLLMG
DVLIAAAMGKFIFNLPFRGNFLIFYGLSGLYVFVSIGLGILLATLSRTQQQVVLTSFFFNAPIIQLSGAIAPIESMPTFF
QILSWFDPLRHYVAIARSLILKGVAIDSLWPNIFALCGFAIILLSVSVSRFRAQLN

Sequences:

>Translated_376_residues
MKINLLQRFFDGRFWALVLKEIRQILKNRQSIFLLIFPPTIQLLVFGLALSPNVDHLSLGLVDYANSGQSREFVSALVEN
DIFQIAATPKNEAQLQQQVRNGQLIAGLIIPPDFDRDLNRGNSTFVQVFIDGVDANTAGITRGYLQQIINAYNRQQNPQF
STLPIETQSRFLYNPGLISSWFFVPGVIGVVLTLTGSLISSVTVIREKDVGTLEQLLMTPASGWEILLAKIVPLFVLLMG
DVLIAAAMGKFIFNLPFRGNFLIFYGLSGLYVFVSIGLGILLATLSRTQQQVVLTSFFFNAPIIQLSGAIAPIESMPTFF
QILSWFDPLRHYVAIARSLILKGVAIDSLWPNIFALCGFAIILLSVSVSRFRAQLN
>Mature_376_residues
MKINLLQRFFDGRFWALVLKEIRQILKNRQSIFLLIFPPTIQLLVFGLALSPNVDHLSLGLVDYANSGQSREFVSALVEN
DIFQIAATPKNEAQLQQQVRNGQLIAGLIIPPDFDRDLNRGNSTFVQVFIDGVDANTAGITRGYLQQIINAYNRQQNPQF
STLPIETQSRFLYNPGLISSWFFVPGVIGVVLTLTGSLISSVTVIREKDVGTLEQLLMTPASGWEILLAKIVPLFVLLMG
DVLIAAAMGKFIFNLPFRGNFLIFYGLSGLYVFVSIGLGILLATLSRTQQQVVLTSFFFNAPIIQLSGAIAPIESMPTFF
QILSWFDPLRHYVAIARSLILKGVAIDSLWPNIFALCGFAIILLSVSVSRFRAQLN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=368, Percent_Identity=30.1630434782609, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1787011, Length=338, Percent_Identity=31.6568047337278, Blast_Score=181, Evalue=7e-47,
Organism=Escherichia coli, GI48994943, Length=372, Percent_Identity=26.6129032258064, Blast_Score=144, Evalue=8e-36,
Organism=Escherichia coli, GI226510979, Length=373, Percent_Identity=27.0777479892761, Blast_Score=127, Evalue=1e-30,
Organism=Drosophila melanogaster, GI85725260, Length=381, Percent_Identity=22.3097112860892, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI85725262, Length=381, Percent_Identity=22.3097112860892, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24650855, Length=382, Percent_Identity=22.2513089005236, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24650853, Length=382, Percent_Identity=22.2513089005236, Blast_Score=68, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41789; Mature: 41789

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINLLQRFFDGRFWALVLKEIRQILKNRQSIFLLIFPPTIQLLVFGLALSPNVDHLSLG
CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEEE
LVDYANSGQSREFVSALVENDIFQIAATPKNEAQLQQQVRNGQLIAGLIIPPDFDRDLNR
HHCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
GNSTFVQVFIDGVDANTAGITRGYLQQIINAYNRQQNPQFSTLPIETQSRFLYNPGLISS
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHH
WFFVPGVIGVVLTLTGSLISSVTVIREKDVGTLEQLLMTPASGWEILLAKIVPLFVLLMG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DVLIAAAMGKFIFNLPFRGNFLIFYGLSGLYVFVSIGLGILLATLSRTQQQVVLTSFFFN
HHHHHHHHHHHHEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APIIQLSGAIAPIESMPTFFQILSWFDPLRHYVAIARSLILKGVAIDSLWPNIFALCGFA
CCHHEECCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILLSVSVSRFRAQLN
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKINLLQRFFDGRFWALVLKEIRQILKNRQSIFLLIFPPTIQLLVFGLALSPNVDHLSLG
CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCCCCEEEEE
LVDYANSGQSREFVSALVENDIFQIAATPKNEAQLQQQVRNGQLIAGLIIPPDFDRDLNR
HHCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
GNSTFVQVFIDGVDANTAGITRGYLQQIINAYNRQQNPQFSTLPIETQSRFLYNPGLISS
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCHHH
WFFVPGVIGVVLTLTGSLISSVTVIREKDVGTLEQLLMTPASGWEILLAKIVPLFVLLMG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DVLIAAAMGKFIFNLPFRGNFLIFYGLSGLYVFVSIGLGILLATLSRTQQQVVLTSFFFN
HHHHHHHHHHHHEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APIIQLSGAIAPIESMPTFFQILSWFDPLRHYVAIARSLILKGVAIDSLWPNIFALCGFA
CCHHEECCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILLSVSVSRFRAQLN
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]