Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078293

Identifier: 170078293

GI number: 170078293

Start: 1771523

End: 1771765

Strand: Direct

Name: 170078293

Synonym: SYNPCC7002_A1686

Alternate gene names: NA

Gene position: 1771523-1771765 (Clockwise)

Preceding gene: 170078292

Following gene: 170078297

Centisome position: 58.89

GC content: 38.27

Gene sequence:

>243_bases
GTGGATTTTCGAAAAAAAATCAACACTCAAAATGAAACCTTAAATATATTGCTCTTGGAGCTTCAAGAAGAGTGCCAACA
GGTTATTTCTCTCATTCATCAATTGCAGCTTACTGATTTGAGCGATCGCCAACGGGGAAAAATCTTGTCGGAACTCCTCG
TTGCATCGATTCACTTACAGACTCACTGTGATGAAGAGTGGCAAAATTTGATTGCTGATGAGTTGCAAAGTTTATCAGAT
TAA

Upstream 100 bases:

>100_bases
ATTTTTGCCTTTGATGAGCACATTCGACAGATGGCAGGTTTGGGCATCGTTTGTGTCCCTCGATAAAATTCCGACAGTGA
ATGATTGGGGAAAAACTAAT

Downstream 100 bases:

>100_bases
TTCACTGAAGCAAGAAACGTCCTTGAAGACCCACCACTTTTTTTGTCGCACGGAAGAATAAACATTTATTTCTCTGTGGC
TAATTTTTCCTCGATGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MDFRKKINTQNETLNILLLELQEECQQVISLIHQLQLTDLSDRQRGKILSELLVASIHLQTHCDEEWQNLIADELQSLSD

Sequences:

>Translated_80_residues
MDFRKKINTQNETLNILLLELQEECQQVISLIHQLQLTDLSDRQRGKILSELLVASIHLQTHCDEEWQNLIADELQSLSD
>Mature_80_residues
MDFRKKINTQNETLNILLLELQEECQQVISLIHQLQLTDLSDRQRGKILSELLVASIHLQTHCDEEWQNLIADELQSLSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9342; Mature: 9342

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFRKKINTQNETLNILLLELQEECQQVISLIHQLQLTDLSDRQRGKILSELLVASIHLQ
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
THCDEEWQNLIADELQSLSD
HCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFRKKINTQNETLNILLLELQEECQQVISLIHQLQLTDLSDRQRGKILSELLVASIHLQ
CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
THCDEEWQNLIADELQSLSD
HCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA