Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078285

Identifier: 170078285

GI number: 170078285

Start: 1761184

End: 1762143

Strand: Direct

Name: 170078285

Synonym: SYNPCC7002_A1678

Alternate gene names: NA

Gene position: 1761184-1762143 (Clockwise)

Preceding gene: 170078284

Following gene: 170078286

Centisome position: 58.55

GC content: 33.54

Gene sequence:

>960_bases
ATGAGACAAATTCTAGAAGGAATAATCAGTCTGATTGAAGCCCTGATAACTTGGCCTAGCTTATTCTTCTATATAGCCAT
AAAGTATCACAAAGAATTTCGTGCAATTCTCAATAGATTAGAAAGCGCAAAATTTGGTGATGCAGAAATTTCCTTAAGTA
AAAAACAAACAGAAAAGGCCATTGATAAAACCTTAGAAGAATTTTCTAAAGATATCATGACTCCAATAATTCAAAGCCTA
GCACCAAATGAAGCTTCAAACACTAACAAAAATCGATATTTAAAAAACAATAATGGAGAGATAAATACGGCTTCTTTTTC
AGTACAAATTGGTGACGTAGACGGTGATGGTAGGGATGAATTTGTTATTTCGAGTATGGAAGGCCTCTACTGGTGTCGCG
TGAGAATTTTTAAGCCTATCTTGGAATTTAGAGAACAAGAAATAAAAACATATTTTGAAATGATTGGTGAAATCTGCCCT
GTAAATTTCCTAGAAGACGTAAGTGATATAGATAGAGACGCATATGCTGAAATCATTGTAAATGAAGATAATAAAAGCTC
AGGTCTCCCGCATGCTGCTGGACATAGAGACCGGGTAGTCTATAAATTTAGAGATGGTCAACTATATGAATTTTCAAGAG
AGGAAATTCCACGATTGAATACTCAGTTTGAGATGAATAAATTTGCAGAAAAGTCTTTTCGAGAAAAAGACAAAATAATG
AATGATATCATTGACAACCTTCTATCTGAATTTGAGGAAAATAAAGATCTAATTGAATTAATAAAAGAATCACAAAATGC
TTGGCTAATATATCGAGAAAAGCAAGCGAGAATTTGGTCTGAAATTGTCAAAGGAGGCTCGATGTATGCAATGATCTATT
GTAATCATATGGCTAGGCTTACAGATCAAAGAATAGACGAGATGAATAACTTGATAGATCGTGAAGAAGGTTGTTTTTGA

Upstream 100 bases:

>100_bases
TTGAAAGAAACAACAGAATAGGCGAGCTAATTAATTCAATAAGATAGAAAAAGCTATCACACAAGTCGGTTTTGTACATT
AAGTTTGATCGTCATTAAAA

Downstream 100 bases:

>100_bases
CTTTTTGAATTCTCTTTGTTTTTGCTTATATAAAAATCCAACCTATATTAAGTCTGTATATGAATATAAAAAACTCTCGC
GTCCAAAAGTAATTGCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRQILEGIISLIEALITWPSLFFYIAIKYHKEFRAILNRLESAKFGDAEISLSKKQTEKAIDKTLEEFSKDIMTPIIQSL
APNEASNTNKNRYLKNNNGEINTASFSVQIGDVDGDGRDEFVISSMEGLYWCRVRIFKPILEFREQEIKTYFEMIGEICP
VNFLEDVSDIDRDAYAEIIVNEDNKSSGLPHAAGHRDRVVYKFRDGQLYEFSREEIPRLNTQFEMNKFAEKSFREKDKIM
NDIIDNLLSEFEENKDLIELIKESQNAWLIYREKQARIWSEIVKGGSMYAMIYCNHMARLTDQRIDEMNNLIDREEGCF

Sequences:

>Translated_319_residues
MRQILEGIISLIEALITWPSLFFYIAIKYHKEFRAILNRLESAKFGDAEISLSKKQTEKAIDKTLEEFSKDIMTPIIQSL
APNEASNTNKNRYLKNNNGEINTASFSVQIGDVDGDGRDEFVISSMEGLYWCRVRIFKPILEFREQEIKTYFEMIGEICP
VNFLEDVSDIDRDAYAEIIVNEDNKSSGLPHAAGHRDRVVYKFRDGQLYEFSREEIPRLNTQFEMNKFAEKSFREKDKIM
NDIIDNLLSEFEENKDLIELIKESQNAWLIYREKQARIWSEIVKGGSMYAMIYCNHMARLTDQRIDEMNNLIDREEGCF
>Mature_319_residues
MRQILEGIISLIEALITWPSLFFYIAIKYHKEFRAILNRLESAKFGDAEISLSKKQTEKAIDKTLEEFSKDIMTPIIQSL
APNEASNTNKNRYLKNNNGEINTASFSVQIGDVDGDGRDEFVISSMEGLYWCRVRIFKPILEFREQEIKTYFEMIGEICP
VNFLEDVSDIDRDAYAEIIVNEDNKSSGLPHAAGHRDRVVYKFRDGQLYEFSREEIPRLNTQFEMNKFAEKSFREKDKIM
NDIIDNLLSEFEENKDLIELIKESQNAWLIYREKQARIWSEIVKGGSMYAMIYCNHMARLTDQRIDEMNNLIDREEGCF

Specific function: Unknown

COG id: COG3755

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37331; Mature: 37331

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQILEGIISLIEALITWPSLFFYIAIKYHKEFRAILNRLESAKFGDAEISLSKKQTEKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHH
IDKTLEEFSKDIMTPIIQSLAPNEASNTNKNRYLKNNNGEINTASFSVQIGDVDGDGRDE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCH
FVISSMEGLYWCRVRIFKPILEFREQEIKTYFEMIGEICPVNFLEDVSDIDRDAYAEIIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHEEEE
NEDNKSSGLPHAAGHRDRVVYKFRDGQLYEFSREEIPRLNTQFEMNKFAEKSFREKDKIM
CCCCCCCCCCCCCCCCCCEEEEECCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHH
NDIIDNLLSEFEENKDLIELIKESQNAWLIYREKQARIWSEIVKGGSMYAMIYCNHMARL
HHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCEEEEHHHHHHHHH
TDQRIDEMNNLIDREEGCF
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRQILEGIISLIEALITWPSLFFYIAIKYHKEFRAILNRLESAKFGDAEISLSKKQTEKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHH
IDKTLEEFSKDIMTPIIQSLAPNEASNTNKNRYLKNNNGEINTASFSVQIGDVDGDGRDE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCH
FVISSMEGLYWCRVRIFKPILEFREQEIKTYFEMIGEICPVNFLEDVSDIDRDAYAEIIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHEEEE
NEDNKSSGLPHAAGHRDRVVYKFRDGQLYEFSREEIPRLNTQFEMNKFAEKSFREKDKIM
CCCCCCCCCCCCCCCCCCEEEEECCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHH
NDIIDNLLSEFEENKDLIELIKESQNAWLIYREKQARIWSEIVKGGSMYAMIYCNHMARL
HHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCEEEEHHHHHHHHH
TDQRIDEMNNLIDREEGCF
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA