| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078285
Identifier: 170078285
GI number: 170078285
Start: 1761184
End: 1762143
Strand: Direct
Name: 170078285
Synonym: SYNPCC7002_A1678
Alternate gene names: NA
Gene position: 1761184-1762143 (Clockwise)
Preceding gene: 170078284
Following gene: 170078286
Centisome position: 58.55
GC content: 33.54
Gene sequence:
>960_bases ATGAGACAAATTCTAGAAGGAATAATCAGTCTGATTGAAGCCCTGATAACTTGGCCTAGCTTATTCTTCTATATAGCCAT AAAGTATCACAAAGAATTTCGTGCAATTCTCAATAGATTAGAAAGCGCAAAATTTGGTGATGCAGAAATTTCCTTAAGTA AAAAACAAACAGAAAAGGCCATTGATAAAACCTTAGAAGAATTTTCTAAAGATATCATGACTCCAATAATTCAAAGCCTA GCACCAAATGAAGCTTCAAACACTAACAAAAATCGATATTTAAAAAACAATAATGGAGAGATAAATACGGCTTCTTTTTC AGTACAAATTGGTGACGTAGACGGTGATGGTAGGGATGAATTTGTTATTTCGAGTATGGAAGGCCTCTACTGGTGTCGCG TGAGAATTTTTAAGCCTATCTTGGAATTTAGAGAACAAGAAATAAAAACATATTTTGAAATGATTGGTGAAATCTGCCCT GTAAATTTCCTAGAAGACGTAAGTGATATAGATAGAGACGCATATGCTGAAATCATTGTAAATGAAGATAATAAAAGCTC AGGTCTCCCGCATGCTGCTGGACATAGAGACCGGGTAGTCTATAAATTTAGAGATGGTCAACTATATGAATTTTCAAGAG AGGAAATTCCACGATTGAATACTCAGTTTGAGATGAATAAATTTGCAGAAAAGTCTTTTCGAGAAAAAGACAAAATAATG AATGATATCATTGACAACCTTCTATCTGAATTTGAGGAAAATAAAGATCTAATTGAATTAATAAAAGAATCACAAAATGC TTGGCTAATATATCGAGAAAAGCAAGCGAGAATTTGGTCTGAAATTGTCAAAGGAGGCTCGATGTATGCAATGATCTATT GTAATCATATGGCTAGGCTTACAGATCAAAGAATAGACGAGATGAATAACTTGATAGATCGTGAAGAAGGTTGTTTTTGA
Upstream 100 bases:
>100_bases TTGAAAGAAACAACAGAATAGGCGAGCTAATTAATTCAATAAGATAGAAAAAGCTATCACACAAGTCGGTTTTGTACATT AAGTTTGATCGTCATTAAAA
Downstream 100 bases:
>100_bases CTTTTTGAATTCTCTTTGTTTTTGCTTATATAAAAATCCAACCTATATTAAGTCTGTATATGAATATAAAAAACTCTCGC GTCCAAAAGTAATTGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MRQILEGIISLIEALITWPSLFFYIAIKYHKEFRAILNRLESAKFGDAEISLSKKQTEKAIDKTLEEFSKDIMTPIIQSL APNEASNTNKNRYLKNNNGEINTASFSVQIGDVDGDGRDEFVISSMEGLYWCRVRIFKPILEFREQEIKTYFEMIGEICP VNFLEDVSDIDRDAYAEIIVNEDNKSSGLPHAAGHRDRVVYKFRDGQLYEFSREEIPRLNTQFEMNKFAEKSFREKDKIM NDIIDNLLSEFEENKDLIELIKESQNAWLIYREKQARIWSEIVKGGSMYAMIYCNHMARLTDQRIDEMNNLIDREEGCF
Sequences:
>Translated_319_residues MRQILEGIISLIEALITWPSLFFYIAIKYHKEFRAILNRLESAKFGDAEISLSKKQTEKAIDKTLEEFSKDIMTPIIQSL APNEASNTNKNRYLKNNNGEINTASFSVQIGDVDGDGRDEFVISSMEGLYWCRVRIFKPILEFREQEIKTYFEMIGEICP VNFLEDVSDIDRDAYAEIIVNEDNKSSGLPHAAGHRDRVVYKFRDGQLYEFSREEIPRLNTQFEMNKFAEKSFREKDKIM NDIIDNLLSEFEENKDLIELIKESQNAWLIYREKQARIWSEIVKGGSMYAMIYCNHMARLTDQRIDEMNNLIDREEGCF >Mature_319_residues MRQILEGIISLIEALITWPSLFFYIAIKYHKEFRAILNRLESAKFGDAEISLSKKQTEKAIDKTLEEFSKDIMTPIIQSL APNEASNTNKNRYLKNNNGEINTASFSVQIGDVDGDGRDEFVISSMEGLYWCRVRIFKPILEFREQEIKTYFEMIGEICP VNFLEDVSDIDRDAYAEIIVNEDNKSSGLPHAAGHRDRVVYKFRDGQLYEFSREEIPRLNTQFEMNKFAEKSFREKDKIM NDIIDNLLSEFEENKDLIELIKESQNAWLIYREKQARIWSEIVKGGSMYAMIYCNHMARLTDQRIDEMNNLIDREEGCF
Specific function: Unknown
COG id: COG3755
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37331; Mature: 37331
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQILEGIISLIEALITWPSLFFYIAIKYHKEFRAILNRLESAKFGDAEISLSKKQTEKA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHH IDKTLEEFSKDIMTPIIQSLAPNEASNTNKNRYLKNNNGEINTASFSVQIGDVDGDGRDE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCH FVISSMEGLYWCRVRIFKPILEFREQEIKTYFEMIGEICPVNFLEDVSDIDRDAYAEIIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHEEEE NEDNKSSGLPHAAGHRDRVVYKFRDGQLYEFSREEIPRLNTQFEMNKFAEKSFREKDKIM CCCCCCCCCCCCCCCCCCEEEEECCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHH NDIIDNLLSEFEENKDLIELIKESQNAWLIYREKQARIWSEIVKGGSMYAMIYCNHMARL HHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCEEEEHHHHHHHHH TDQRIDEMNNLIDREEGCF HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRQILEGIISLIEALITWPSLFFYIAIKYHKEFRAILNRLESAKFGDAEISLSKKQTEKA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHH IDKTLEEFSKDIMTPIIQSLAPNEASNTNKNRYLKNNNGEINTASFSVQIGDVDGDGRDE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCH FVISSMEGLYWCRVRIFKPILEFREQEIKTYFEMIGEICPVNFLEDVSDIDRDAYAEIIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHEEEE NEDNKSSGLPHAAGHRDRVVYKFRDGQLYEFSREEIPRLNTQFEMNKFAEKSFREKDKIM CCCCCCCCCCCCCCCCCCEEEEECCCCEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHH NDIIDNLLSEFEENKDLIELIKESQNAWLIYREKQARIWSEIVKGGSMYAMIYCNHMARL HHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCEEEEHHHHHHHHH TDQRIDEMNNLIDREEGCF HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA