| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078281
Identifier: 170078281
GI number: 170078281
Start: 1756944
End: 1758314
Strand: Reverse
Name: 170078281
Synonym: SYNPCC7002_A1674
Alternate gene names: NA
Gene position: 1758314-1756944 (Counterclockwise)
Preceding gene: 170078282
Following gene: 170078280
Centisome position: 58.45
GC content: 53.03
Gene sequence:
>1371_bases ATGACCAGTGCTTTTGTACTAATCTTTTCAGTTTTAATCTTGGGGGGCATCCTGGCGGCACTGGGCGATCGCCTTGGTAG TAAGGTCGGCAAAGCGCGGCTTACATTATTTAATCTGCGGCCAAAACAGACGGCGGTGGTCGTCACGGTAATGACGGGAA CAGTGATCGCAGCTAGCACCTTGGGGTTATTGTTTGGCTTGAGCAAGTCCTTGCGCCAGGGGGTTTTTCAGTTGGATGAA ATCCTCGCCCAGCGGCGGCAAGAGTTGATGGATGTGACGGCGGAAAAGGAAAAGATTGAAAAAGAGTTACAGGCCGCGAG GGATGATCGCCTAGAAGCAGAACAAGATTTACAGGAGATTGAAGCAAAATTTGAAACGGCCCAAACTCAACTGGCGGGTT TTCGGGAACAAGCCAGCGAACTTCAGGCTGATATTAATGCGCTCACCACAGAGCAAACGACCTTGCGGCAACAGCGCGAT CGCCTCCAAGCCCAAAGTGAAACCCTCCGCGCCCAGCTCAATCAACAAAACACCATTATTGAGGAACGCTCCCAGCAGAT CGAAGCCCTAGAAGCCCAACAAAGTGAGCTCCAAGCCGAGATCAACCAGCGCGATGGTCGCATTGCCCAACTCGACCAGG CGATCGCCCAAAAAGATCAAGTGCTCACGGGCCTAGAAAATCAGATTGGCTCCCTAGAACAGCAAATTGATATCCTCGAA GCCAACTACATCAATTTCCGGAGTGGGAATGTCGCCCTCACCACAGGGCAAGTTTTAGCCTTTGGGGTGGTGCGGATTAT TGATCCCAAAGCAGCCAGCCAAGCCGTTGATCAGCTGCTCCGGGAAGCGAATCGCAACGCGATCATTGCCACCGGAGGCG TTAATCCTGACTTTGAGGCGCGGGTGGTGCAAATTACCAATGCCCAAGTGCAACAACTCCTAGGGCAAATTGCCGATGGT CGGGACTACGTGGTGCGCCTCCTGGCGGCGGGGAACTACCTCCAGGGGGAAGGTTCCGTCCAAGTGTTTGCGGATGTGAC TTTAAATGAGCAGGTTTTTCGCGCCGGGGAAGTGATTGCCACTTTGTCCCTAGAGGAGCTGAGTGTACAAAATCCTACTG CGGCCCGGCGTCCAGTGGATTTTCTGTTGGGGGCAGCGCAATTCCGGGCGCGGCGAGCCGGGGTTCTCGGAGATATTCAA GTTAAAGATGGCAATGTCGGTCACATTATCAATTTTGTCGAAGCCCTCAACAACTCACCAGAACCCGTGACAGAAATTCG GGCGATCGCCATCGAAAATGGTTTTACGGCTGGCCCCCTCCGCTTAGAATTAGTGGGCCTCAGTAACGGTAGAATCGTCA TCAGACAATAG
Upstream 100 bases:
>100_bases AAAATTACCGTCCATGACCCCGTAAACCTGAGTCAACAGTTCGCTTAACGCTAAAGTAGAGAAGTCATACTTGTGTGTTT GGATGTCACCTTTTTGTTAA
Downstream 100 bases:
>100_bases GACAAGAAGAGTACATGAGCGTTTATCTTGGGTTTGACCCAGGCCGTGACAAATGTGGCCTTGCGGCGCTGGATGACCAA GGGCAATTGTTGAACCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MTSAFVLIFSVLILGGILAALGDRLGSKVGKARLTLFNLRPKQTAVVVTVMTGTVIAASTLGLLFGLSKSLRQGVFQLDE ILAQRRQELMDVTAEKEKIEKELQAARDDRLEAEQDLQEIEAKFETAQTQLAGFREQASELQADINALTTEQTTLRQQRD RLQAQSETLRAQLNQQNTIIEERSQQIEALEAQQSELQAEINQRDGRIAQLDQAIAQKDQVLTGLENQIGSLEQQIDILE ANYINFRSGNVALTTGQVLAFGVVRIIDPKAASQAVDQLLREANRNAIIATGGVNPDFEARVVQITNAQVQQLLGQIADG RDYVVRLLAAGNYLQGEGSVQVFADVTLNEQVFRAGEVIATLSLEELSVQNPTAARRPVDFLLGAAQFRARRAGVLGDIQ VKDGNVGHIINFVEALNNSPEPVTEIRAIAIENGFTAGPLRLELVGLSNGRIVIRQ
Sequences:
>Translated_456_residues MTSAFVLIFSVLILGGILAALGDRLGSKVGKARLTLFNLRPKQTAVVVTVMTGTVIAASTLGLLFGLSKSLRQGVFQLDE ILAQRRQELMDVTAEKEKIEKELQAARDDRLEAEQDLQEIEAKFETAQTQLAGFREQASELQADINALTTEQTTLRQQRD RLQAQSETLRAQLNQQNTIIEERSQQIEALEAQQSELQAEINQRDGRIAQLDQAIAQKDQVLTGLENQIGSLEQQIDILE ANYINFRSGNVALTTGQVLAFGVVRIIDPKAASQAVDQLLREANRNAIIATGGVNPDFEARVVQITNAQVQQLLGQIADG RDYVVRLLAAGNYLQGEGSVQVFADVTLNEQVFRAGEVIATLSLEELSVQNPTAARRPVDFLLGAAQFRARRAGVLGDIQ VKDGNVGHIINFVEALNNSPEPVTEIRAIAIENGFTAGPLRLELVGLSNGRIVIRQ >Mature_455_residues TSAFVLIFSVLILGGILAALGDRLGSKVGKARLTLFNLRPKQTAVVVTVMTGTVIAASTLGLLFGLSKSLRQGVFQLDEI LAQRRQELMDVTAEKEKIEKELQAARDDRLEAEQDLQEIEAKFETAQTQLAGFREQASELQADINALTTEQTTLRQQRDR LQAQSETLRAQLNQQNTIIEERSQQIEALEAQQSELQAEINQRDGRIAQLDQAIAQKDQVLTGLENQIGSLEQQIDILEA NYINFRSGNVALTTGQVLAFGVVRIIDPKAASQAVDQLLREANRNAIIATGGVNPDFEARVVQITNAQVQQLLGQIADGR DYVVRLLAAGNYLQGEGSVQVFADVTLNEQVFRAGEVIATLSLEELSVQNPTAARRPVDFLLGAAQFRARRAGVLGDIQV KDGNVGHIINFVEALNNSPEPVTEIRAIAIENGFTAGPLRLELVGLSNGRIVIRQ
Specific function: Unknown
COG id: COG4372
COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021435 [H]
Pfam domain/function: PF11283 DUF3084 [H]
EC number: NA
Molecular weight: Translated: 49833; Mature: 49702
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAFVLIFSVLILGGILAALGDRLGSKVGKARLTLFNLRPKQTAVVVTVMTGTVIAAST CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCEEEEEEEEHHHHHHHHH LGLLFGLSKSLRQGVFQLDEILAQRRQELMDVTAEKEKIEKELQAARDDRLEAEQDLQEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EAKFETAQTQLAGFREQASELQADINALTTEQTTLRQQRDRLQAQSETLRAQLNQQNTII HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EERSQQIEALEAQQSELQAEINQRDGRIAQLDQAIAQKDQVLTGLENQIGSLEQQIDILE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANYINFRSGNVALTTGQVLAFGVVRIIDPKAASQAVDQLLREANRNAIIATGGVNPDFEA CCEEEEECCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCE RVVQITNAQVQQLLGQIADGRDYVVRLLAAGNYLQGEGSVQVFADVTLNEQVFRAGEVIA EEEEECHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCEEEEEEECCCHHHHHHHHHHE TLSLEELSVQNPTAARRPVDFLLGAAQFRARRAGVLGDIQVKDGNVGHIINFVEALNNSP EEEHHHHCCCCCCCHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCC EPVTEIRAIAIENGFTAGPLRLELVGLSNGRIVIRQ CCHHHHHHEEECCCCCCCCEEEEEEEECCCEEEEEC >Mature Secondary Structure TSAFVLIFSVLILGGILAALGDRLGSKVGKARLTLFNLRPKQTAVVVTVMTGTVIAAST CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCEEEEEEEEHHHHHHHHH LGLLFGLSKSLRQGVFQLDEILAQRRQELMDVTAEKEKIEKELQAARDDRLEAEQDLQEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EAKFETAQTQLAGFREQASELQADINALTTEQTTLRQQRDRLQAQSETLRAQLNQQNTII HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EERSQQIEALEAQQSELQAEINQRDGRIAQLDQAIAQKDQVLTGLENQIGSLEQQIDILE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANYINFRSGNVALTTGQVLAFGVVRIIDPKAASQAVDQLLREANRNAIIATGGVNPDFEA CCEEEEECCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCE RVVQITNAQVQQLLGQIADGRDYVVRLLAAGNYLQGEGSVQVFADVTLNEQVFRAGEVIA EEEEECHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCEEEEEEECCCHHHHHHHHHHE TLSLEELSVQNPTAARRPVDFLLGAAQFRARRAGVLGDIQVKDGNVGHIINFVEALNNSP EEEHHHHCCCCCCCHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCC EPVTEIRAIAIENGFTAGPLRLELVGLSNGRIVIRQ CCHHHHHHEEECCCCCCCCEEEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11759840; 8391534 [H]