Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078281

Identifier: 170078281

GI number: 170078281

Start: 1756944

End: 1758314

Strand: Reverse

Name: 170078281

Synonym: SYNPCC7002_A1674

Alternate gene names: NA

Gene position: 1758314-1756944 (Counterclockwise)

Preceding gene: 170078282

Following gene: 170078280

Centisome position: 58.45

GC content: 53.03

Gene sequence:

>1371_bases
ATGACCAGTGCTTTTGTACTAATCTTTTCAGTTTTAATCTTGGGGGGCATCCTGGCGGCACTGGGCGATCGCCTTGGTAG
TAAGGTCGGCAAAGCGCGGCTTACATTATTTAATCTGCGGCCAAAACAGACGGCGGTGGTCGTCACGGTAATGACGGGAA
CAGTGATCGCAGCTAGCACCTTGGGGTTATTGTTTGGCTTGAGCAAGTCCTTGCGCCAGGGGGTTTTTCAGTTGGATGAA
ATCCTCGCCCAGCGGCGGCAAGAGTTGATGGATGTGACGGCGGAAAAGGAAAAGATTGAAAAAGAGTTACAGGCCGCGAG
GGATGATCGCCTAGAAGCAGAACAAGATTTACAGGAGATTGAAGCAAAATTTGAAACGGCCCAAACTCAACTGGCGGGTT
TTCGGGAACAAGCCAGCGAACTTCAGGCTGATATTAATGCGCTCACCACAGAGCAAACGACCTTGCGGCAACAGCGCGAT
CGCCTCCAAGCCCAAAGTGAAACCCTCCGCGCCCAGCTCAATCAACAAAACACCATTATTGAGGAACGCTCCCAGCAGAT
CGAAGCCCTAGAAGCCCAACAAAGTGAGCTCCAAGCCGAGATCAACCAGCGCGATGGTCGCATTGCCCAACTCGACCAGG
CGATCGCCCAAAAAGATCAAGTGCTCACGGGCCTAGAAAATCAGATTGGCTCCCTAGAACAGCAAATTGATATCCTCGAA
GCCAACTACATCAATTTCCGGAGTGGGAATGTCGCCCTCACCACAGGGCAAGTTTTAGCCTTTGGGGTGGTGCGGATTAT
TGATCCCAAAGCAGCCAGCCAAGCCGTTGATCAGCTGCTCCGGGAAGCGAATCGCAACGCGATCATTGCCACCGGAGGCG
TTAATCCTGACTTTGAGGCGCGGGTGGTGCAAATTACCAATGCCCAAGTGCAACAACTCCTAGGGCAAATTGCCGATGGT
CGGGACTACGTGGTGCGCCTCCTGGCGGCGGGGAACTACCTCCAGGGGGAAGGTTCCGTCCAAGTGTTTGCGGATGTGAC
TTTAAATGAGCAGGTTTTTCGCGCCGGGGAAGTGATTGCCACTTTGTCCCTAGAGGAGCTGAGTGTACAAAATCCTACTG
CGGCCCGGCGTCCAGTGGATTTTCTGTTGGGGGCAGCGCAATTCCGGGCGCGGCGAGCCGGGGTTCTCGGAGATATTCAA
GTTAAAGATGGCAATGTCGGTCACATTATCAATTTTGTCGAAGCCCTCAACAACTCACCAGAACCCGTGACAGAAATTCG
GGCGATCGCCATCGAAAATGGTTTTACGGCTGGCCCCCTCCGCTTAGAATTAGTGGGCCTCAGTAACGGTAGAATCGTCA
TCAGACAATAG

Upstream 100 bases:

>100_bases
AAAATTACCGTCCATGACCCCGTAAACCTGAGTCAACAGTTCGCTTAACGCTAAAGTAGAGAAGTCATACTTGTGTGTTT
GGATGTCACCTTTTTGTTAA

Downstream 100 bases:

>100_bases
GACAAGAAGAGTACATGAGCGTTTATCTTGGGTTTGACCCAGGCCGTGACAAATGTGGCCTTGCGGCGCTGGATGACCAA
GGGCAATTGTTGAACCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MTSAFVLIFSVLILGGILAALGDRLGSKVGKARLTLFNLRPKQTAVVVTVMTGTVIAASTLGLLFGLSKSLRQGVFQLDE
ILAQRRQELMDVTAEKEKIEKELQAARDDRLEAEQDLQEIEAKFETAQTQLAGFREQASELQADINALTTEQTTLRQQRD
RLQAQSETLRAQLNQQNTIIEERSQQIEALEAQQSELQAEINQRDGRIAQLDQAIAQKDQVLTGLENQIGSLEQQIDILE
ANYINFRSGNVALTTGQVLAFGVVRIIDPKAASQAVDQLLREANRNAIIATGGVNPDFEARVVQITNAQVQQLLGQIADG
RDYVVRLLAAGNYLQGEGSVQVFADVTLNEQVFRAGEVIATLSLEELSVQNPTAARRPVDFLLGAAQFRARRAGVLGDIQ
VKDGNVGHIINFVEALNNSPEPVTEIRAIAIENGFTAGPLRLELVGLSNGRIVIRQ

Sequences:

>Translated_456_residues
MTSAFVLIFSVLILGGILAALGDRLGSKVGKARLTLFNLRPKQTAVVVTVMTGTVIAASTLGLLFGLSKSLRQGVFQLDE
ILAQRRQELMDVTAEKEKIEKELQAARDDRLEAEQDLQEIEAKFETAQTQLAGFREQASELQADINALTTEQTTLRQQRD
RLQAQSETLRAQLNQQNTIIEERSQQIEALEAQQSELQAEINQRDGRIAQLDQAIAQKDQVLTGLENQIGSLEQQIDILE
ANYINFRSGNVALTTGQVLAFGVVRIIDPKAASQAVDQLLREANRNAIIATGGVNPDFEARVVQITNAQVQQLLGQIADG
RDYVVRLLAAGNYLQGEGSVQVFADVTLNEQVFRAGEVIATLSLEELSVQNPTAARRPVDFLLGAAQFRARRAGVLGDIQ
VKDGNVGHIINFVEALNNSPEPVTEIRAIAIENGFTAGPLRLELVGLSNGRIVIRQ
>Mature_455_residues
TSAFVLIFSVLILGGILAALGDRLGSKVGKARLTLFNLRPKQTAVVVTVMTGTVIAASTLGLLFGLSKSLRQGVFQLDEI
LAQRRQELMDVTAEKEKIEKELQAARDDRLEAEQDLQEIEAKFETAQTQLAGFREQASELQADINALTTEQTTLRQQRDR
LQAQSETLRAQLNQQNTIIEERSQQIEALEAQQSELQAEINQRDGRIAQLDQAIAQKDQVLTGLENQIGSLEQQIDILEA
NYINFRSGNVALTTGQVLAFGVVRIIDPKAASQAVDQLLREANRNAIIATGGVNPDFEARVVQITNAQVQQLLGQIADGR
DYVVRLLAAGNYLQGEGSVQVFADVTLNEQVFRAGEVIATLSLEELSVQNPTAARRPVDFLLGAAQFRARRAGVLGDIQV
KDGNVGHIINFVEALNNSPEPVTEIRAIAIENGFTAGPLRLELVGLSNGRIVIRQ

Specific function: Unknown

COG id: COG4372

COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021435 [H]

Pfam domain/function: PF11283 DUF3084 [H]

EC number: NA

Molecular weight: Translated: 49833; Mature: 49702

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAFVLIFSVLILGGILAALGDRLGSKVGKARLTLFNLRPKQTAVVVTVMTGTVIAAST
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCEEEEEEEEHHHHHHHHH
LGLLFGLSKSLRQGVFQLDEILAQRRQELMDVTAEKEKIEKELQAARDDRLEAEQDLQEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EAKFETAQTQLAGFREQASELQADINALTTEQTTLRQQRDRLQAQSETLRAQLNQQNTII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERSQQIEALEAQQSELQAEINQRDGRIAQLDQAIAQKDQVLTGLENQIGSLEQQIDILE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANYINFRSGNVALTTGQVLAFGVVRIIDPKAASQAVDQLLREANRNAIIATGGVNPDFEA
CCEEEEECCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCE
RVVQITNAQVQQLLGQIADGRDYVVRLLAAGNYLQGEGSVQVFADVTLNEQVFRAGEVIA
EEEEECHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCEEEEEEECCCHHHHHHHHHHE
TLSLEELSVQNPTAARRPVDFLLGAAQFRARRAGVLGDIQVKDGNVGHIINFVEALNNSP
EEEHHHHCCCCCCCHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCC
EPVTEIRAIAIENGFTAGPLRLELVGLSNGRIVIRQ
CCHHHHHHEEECCCCCCCCEEEEEEEECCCEEEEEC
>Mature Secondary Structure 
TSAFVLIFSVLILGGILAALGDRLGSKVGKARLTLFNLRPKQTAVVVTVMTGTVIAAST
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCEEEEEEEEHHHHHHHHH
LGLLFGLSKSLRQGVFQLDEILAQRRQELMDVTAEKEKIEKELQAARDDRLEAEQDLQEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EAKFETAQTQLAGFREQASELQADINALTTEQTTLRQQRDRLQAQSETLRAQLNQQNTII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERSQQIEALEAQQSELQAEINQRDGRIAQLDQAIAQKDQVLTGLENQIGSLEQQIDILE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANYINFRSGNVALTTGQVLAFGVVRIIDPKAASQAVDQLLREANRNAIIATGGVNPDFEA
CCEEEEECCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCE
RVVQITNAQVQQLLGQIADGRDYVVRLLAAGNYLQGEGSVQVFADVTLNEQVFRAGEVIA
EEEEECHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCCEEEEEEECCCHHHHHHHHHHE
TLSLEELSVQNPTAARRPVDFLLGAAQFRARRAGVLGDIQVKDGNVGHIINFVEALNNSP
EEEHHHHCCCCCCCHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCC
EPVTEIRAIAIENGFTAGPLRLELVGLSNGRIVIRQ
CCHHHHHHEEECCCCCCCCEEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840; 8391534 [H]