Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078232

Identifier: 170078232

GI number: 170078232

Start: 1705109

End: 1705654

Strand: Reverse

Name: 170078232

Synonym: SYNPCC7002_A1624

Alternate gene names: NA

Gene position: 1705654-1705109 (Counterclockwise)

Preceding gene: 170078233

Following gene: 170078230

Centisome position: 56.7

GC content: 37.91

Gene sequence:

>546_bases
ATGAATAATTATGAATTTTCGTTGGTTTTAGCAAATGTTCGCGACTTTGATGAACAGCTTGTTGATCGCATTTTTGAAGC
AGGCTGCGACGATGCCTCATTATTAACTCGTAATGGTGTGGTTTATTTGGATTTTGATCGTGAAGCAACTTCTTTTACTG
AAGCCGTTTGGTCGGCGATTCGTCAAGTTGAAAGTATTGCTCAACCTAAGATTCGTGTCGATAGTATTCAGCCAGATGAT
TTAGTGACAGTGTCTGAAATAGCGCGTCGTATCCAAAAAAGTCGTGAATATGTACGTTTGCTCATTAATGGTGAAAGAGG
TACAGGCAATTTTCCGTTACCTATTTCTGGAATGAGTCAAAAATCAATGATCTGGAGTTGGTCAAGGGTTTCTCAATGGC
TATTTAAACAAGGTTTAGTTTCAGAAGAACAAGTGGCGATCGCCCAAGAAATTGCAGATATTAATCAATATCTCTTTCAT
CGAGATCATTGGCGAGAATTTAATCAACGAATGAAAAAAATTGAAGCTCATCTATTGGCTGTTTAG

Upstream 100 bases:

>100_bases
TTGGGTTGTAAAAAATCAGTTCTGTCTACACCCCGCAATCCTGAAAATCATGCTAAGCAAATCAGAAAAGCCATTAAACA
ATGTTCCCATTCAGAAAACA

Downstream 100 bases:

>100_bases
CTGACCTGTTCAATTTGGCGTACAGCGGTCAGGGCAGAATAACTTACCCCAGCTGTACCTTCTCCCGGATGGACAGAATC
TCCCACGAGCCAAACATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNNYEFSLVLANVRDFDEQLVDRIFEAGCDDASLLTRNGVVYLDFDREATSFTEAVWSAIRQVESIAQPKIRVDSIQPDD
LVTVSEIARRIQKSREYVRLLINGERGTGNFPLPISGMSQKSMIWSWSRVSQWLFKQGLVSEEQVAIAQEIADINQYLFH
RDHWREFNQRMKKIEAHLLAV

Sequences:

>Translated_181_residues
MNNYEFSLVLANVRDFDEQLVDRIFEAGCDDASLLTRNGVVYLDFDREATSFTEAVWSAIRQVESIAQPKIRVDSIQPDD
LVTVSEIARRIQKSREYVRLLINGERGTGNFPLPISGMSQKSMIWSWSRVSQWLFKQGLVSEEQVAIAQEIADINQYLFH
RDHWREFNQRMKKIEAHLLAV
>Mature_181_residues
MNNYEFSLVLANVRDFDEQLVDRIFEAGCDDASLLTRNGVVYLDFDREATSFTEAVWSAIRQVESIAQPKIRVDSIQPDD
LVTVSEIARRIQKSREYVRLLINGERGTGNFPLPISGMSQKSMIWSWSRVSQWLFKQGLVSEEQVAIAQEIADINQYLFH
RDHWREFNQRMKKIEAHLLAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21009; Mature: 21009

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNYEFSLVLANVRDFDEQLVDRIFEAGCDDASLLTRNGVVYLDFDREATSFTEAVWSAI
CCCCEEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHH
RQVESIAQPKIRVDSIQPDDLVTVSEIARRIQKSREYVRLLINGERGTGNFPLPISGMSQ
HHHHHHHCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC
KSMIWSWSRVSQWLFKQGLVSEEQVAIAQEIADINQYLFHRDHWREFNQRMKKIEAHLLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
V
C
>Mature Secondary Structure
MNNYEFSLVLANVRDFDEQLVDRIFEAGCDDASLLTRNGVVYLDFDREATSFTEAVWSAI
CCCCEEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHH
RQVESIAQPKIRVDSIQPDDLVTVSEIARRIQKSREYVRLLINGERGTGNFPLPISGMSQ
HHHHHHHCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC
KSMIWSWSRVSQWLFKQGLVSEEQVAIAQEIADINQYLFHRDHWREFNQRMKKIEAHLLA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA