| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078232
Identifier: 170078232
GI number: 170078232
Start: 1705109
End: 1705654
Strand: Reverse
Name: 170078232
Synonym: SYNPCC7002_A1624
Alternate gene names: NA
Gene position: 1705654-1705109 (Counterclockwise)
Preceding gene: 170078233
Following gene: 170078230
Centisome position: 56.7
GC content: 37.91
Gene sequence:
>546_bases ATGAATAATTATGAATTTTCGTTGGTTTTAGCAAATGTTCGCGACTTTGATGAACAGCTTGTTGATCGCATTTTTGAAGC AGGCTGCGACGATGCCTCATTATTAACTCGTAATGGTGTGGTTTATTTGGATTTTGATCGTGAAGCAACTTCTTTTACTG AAGCCGTTTGGTCGGCGATTCGTCAAGTTGAAAGTATTGCTCAACCTAAGATTCGTGTCGATAGTATTCAGCCAGATGAT TTAGTGACAGTGTCTGAAATAGCGCGTCGTATCCAAAAAAGTCGTGAATATGTACGTTTGCTCATTAATGGTGAAAGAGG TACAGGCAATTTTCCGTTACCTATTTCTGGAATGAGTCAAAAATCAATGATCTGGAGTTGGTCAAGGGTTTCTCAATGGC TATTTAAACAAGGTTTAGTTTCAGAAGAACAAGTGGCGATCGCCCAAGAAATTGCAGATATTAATCAATATCTCTTTCAT CGAGATCATTGGCGAGAATTTAATCAACGAATGAAAAAAATTGAAGCTCATCTATTGGCTGTTTAG
Upstream 100 bases:
>100_bases TTGGGTTGTAAAAAATCAGTTCTGTCTACACCCCGCAATCCTGAAAATCATGCTAAGCAAATCAGAAAAGCCATTAAACA ATGTTCCCATTCAGAAAACA
Downstream 100 bases:
>100_bases CTGACCTGTTCAATTTGGCGTACAGCGGTCAGGGCAGAATAACTTACCCCAGCTGTACCTTCTCCCGGATGGACAGAATC TCCCACGAGCCAAACATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MNNYEFSLVLANVRDFDEQLVDRIFEAGCDDASLLTRNGVVYLDFDREATSFTEAVWSAIRQVESIAQPKIRVDSIQPDD LVTVSEIARRIQKSREYVRLLINGERGTGNFPLPISGMSQKSMIWSWSRVSQWLFKQGLVSEEQVAIAQEIADINQYLFH RDHWREFNQRMKKIEAHLLAV
Sequences:
>Translated_181_residues MNNYEFSLVLANVRDFDEQLVDRIFEAGCDDASLLTRNGVVYLDFDREATSFTEAVWSAIRQVESIAQPKIRVDSIQPDD LVTVSEIARRIQKSREYVRLLINGERGTGNFPLPISGMSQKSMIWSWSRVSQWLFKQGLVSEEQVAIAQEIADINQYLFH RDHWREFNQRMKKIEAHLLAV >Mature_181_residues MNNYEFSLVLANVRDFDEQLVDRIFEAGCDDASLLTRNGVVYLDFDREATSFTEAVWSAIRQVESIAQPKIRVDSIQPDD LVTVSEIARRIQKSREYVRLLINGERGTGNFPLPISGMSQKSMIWSWSRVSQWLFKQGLVSEEQVAIAQEIADINQYLFH RDHWREFNQRMKKIEAHLLAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21009; Mature: 21009
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNYEFSLVLANVRDFDEQLVDRIFEAGCDDASLLTRNGVVYLDFDREATSFTEAVWSAI CCCCEEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHH RQVESIAQPKIRVDSIQPDDLVTVSEIARRIQKSREYVRLLINGERGTGNFPLPISGMSQ HHHHHHHCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC KSMIWSWSRVSQWLFKQGLVSEEQVAIAQEIADINQYLFHRDHWREFNQRMKKIEAHLLA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC V C >Mature Secondary Structure MNNYEFSLVLANVRDFDEQLVDRIFEAGCDDASLLTRNGVVYLDFDREATSFTEAVWSAI CCCCEEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHH RQVESIAQPKIRVDSIQPDDLVTVSEIARRIQKSREYVRLLINGERGTGNFPLPISGMSQ HHHHHHHCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCC KSMIWSWSRVSQWLFKQGLVSEEQVAIAQEIADINQYLFHRDHWREFNQRMKKIEAHLLA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA