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The map label for this gene is 170078213

Identifier: 170078213

GI number: 170078213

Start: 1684812

End: 1685270

Strand: Reverse

Name: 170078213

Synonym: SYNPCC7002_A1605

Alternate gene names: NA

Gene position: 1685270-1684812 (Counterclockwise)

Preceding gene: 170078214

Following gene: 170078204

Centisome position: 56.03

GC content: 48.58

Gene sequence:

>459_bases
ATGATGCTACGTTTGCGGTCAGTTTTGTCCTTGCTGTTAGTGGTCATCACCACTTTTCTCGTTAGCTGCTCTGGCCCCGC
GGCCAAAGTACCTGATACCTACACCCCTGATCGGCTTGCCCAAATTCAACTTTATGCCACCCCAGTCGATCAGGCGCGCC
AAGGGATGGAAACTCTTGGTCAATTTGTCCAGGAAAATAACTGGATTGATACCCGCACCTATATCCACGGGCCTCTGGGG
TTCCTACGTCGTGACCTCACCTACTTAGCAAATACCTTGCTGCCGAGTGATCAAAAAGCGGCGAAGAACTTCATTGATGA
AATCTTTGCCCACCTAGAACGCCTTGATGTCGCGGCCCAAAACAAAAATGAGGCAGCCACATCGACGGAATATAACAATG
CCATTGCTGATTTTGATGCTTTCTTGGATTTGATCCCAAGTGATTCTGAAGCAAGCTAA

Upstream 100 bases:

>100_bases
ATATGAATGGCGCTAGTCGAAAACCTGATCTCAGTCCCATTTGTGAGATGATGTTGGCAATTGAAAACCTGATAACGTCA
TTAAGCTTTAATACATAACC

Downstream 100 bases:

>100_bases
TTGCAGTTTCTAGATTTTAAAAATTCCTTTGTGAAAGTAATGAGGCGGTCAGGCGATCGCCTTTTTTATTGGCAGTTTTC
ACGTATCTCAACCTACATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Photosystem II Protein Q; Photosystem II Extrinsic Protein; Lipoprotein

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MMLRLRSVLSLLLVVITTFLVSCSGPAAKVPDTYTPDRLAQIQLYATPVDQARQGMETLGQFVQENNWIDTRTYIHGPLG
FLRRDLTYLANTLLPSDQKAAKNFIDEIFAHLERLDVAAQNKNEAATSTEYNNAIADFDAFLDLIPSDSEAS

Sequences:

>Translated_152_residues
MMLRLRSVLSLLLVVITTFLVSCSGPAAKVPDTYTPDRLAQIQLYATPVDQARQGMETLGQFVQENNWIDTRTYIHGPLG
FLRRDLTYLANTLLPSDQKAAKNFIDEIFAHLERLDVAAQNKNEAATSTEYNNAIADFDAFLDLIPSDSEAS
>Mature_152_residues
MMLRLRSVLSLLLVVITTFLVSCSGPAAKVPDTYTPDRLAQIQLYATPVDQARQGMETLGQFVQENNWIDTRTYIHGPLG
FLRRDLTYLANTLLPSDQKAAKNFIDEIFAHLERLDVAAQNKNEAATSTEYNNAIADFDAFLDLIPSDSEAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16938; Mature: 16938

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLRLRSVLSLLLVVITTFLVSCSGPAAKVPDTYTPDRLAQIQLYATPVDQARQGMETLG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEECCHHHHHHHHHHHH
QFVQENNWIDTRTYIHGPLGFLRRDLTYLANTLLPSDQKAAKNFIDEIFAHLERLDVAAQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
NKNEAATSTEYNNAIADFDAFLDLIPSDSEAS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MMLRLRSVLSLLLVVITTFLVSCSGPAAKVPDTYTPDRLAQIQLYATPVDQARQGMETLG
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEECCHHHHHHHHHHHH
QFVQENNWIDTRTYIHGPLGFLRRDLTYLANTLLPSDQKAAKNFIDEIFAHLERLDVAAQ
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
NKNEAATSTEYNNAIADFDAFLDLIPSDSEAS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA