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The map label for this gene is rutD [H]

Identifier: 170078203

GI number: 170078203

Start: 1673880

End: 1674743

Strand: Reverse

Name: rutD [H]

Synonym: SYNPCC7002_A1594

Alternate gene names: 170078203

Gene position: 1674743-1673880 (Counterclockwise)

Preceding gene: 170078204

Following gene: 170078202

Centisome position: 55.68

GC content: 49.88

Gene sequence:

>864_bases
GTGCTCCATGCCTATGACTTTACCCCCAGCGATCGCCCCGCAGATCCTGCCGGAGAAGAGACCGAATATCCCACTCTTGT
TTTTATCCATGGTTGGCTCCTGAGTCGCGCCTATTGGCAGCCCCTCATTGATCTTTTAAAACAAGATTATGCCTGTCTCG
CCTACGACCTCCGAGGTTTTGGGGAATCTGCCGCGAAGACCCAAGGCGATCGCTACCCAGACCAAGGCTACACTCTCCAA
GATTACGGCACCGATCTCCAACATTTACTCGACACCCTCAACCTCAAAAACGTTTGGCTTGTGGGTCATTCCCTAGGGGG
GAGTATTGCTCTGTGGGGGGCCGCCATTTGTCCCGAACGGGTGCGGGGAATTATCTGTATCAATGCTGGGGGGGGCATTT
ATCTCAAAGAAGACTTTGAAAAGTTTCGCAATGCTGGCCAGAACCTCGTCAAAAACCGTTGGCCCTTCCTGAAACATTTA
CCGTTATTGGACTTATTTTTTGCCCGGTTAATGGTGCATCGTCCCCTCTCAAGACAATGGGGAAAACAGAGAATTCATGA
CTTTCTCCAGGCCGATGCCACTGCCGCCCTCGGCGCTCTCCTCGAAACAACCACCGAACAAGAAGTGCATTACCTACCGC
AGTTGGTGGCGCAATTAGGCCAACCGGTTTACTTTTTGGCAGGACAGCAAGATCCCGTCATGGAACTGAAGTATGTGCGC
CATTTAGCCAGCTTTCATCCTAGTTTTGGTTGTATGGGCAATAATGTCCGAGAAATTGATCACTGCGGTCATTTAGCGAT
GGTTGAACAAGTCGTCTCGGTAGAAGAAAATATCCGCAAAATTTTAAATCAATATCACCCCTAA

Upstream 100 bases:

>100_bases
CAGGGCAACCTGGGAGAACGCTCTTGGGTAAAATATAAAAATGATCGAAATGTGAGCCCATTGGTAACAAGACTTTATGG
CAACAACGGTAATTCGCAAT

Downstream 100 bases:

>100_bases
AAAGACTGTAAAAGTGCAGGGAGATTGTCTACAATGCTTAGTAGAGAAATGTTACTGTGCTCTGCCCAAACCTTGGAGAA
GCTTATGCTACACCGCAAGA

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MLHAYDFTPSDRPADPAGEETEYPTLVFIHGWLLSRAYWQPLIDLLKQDYACLAYDLRGFGESAAKTQGDRYPDQGYTLQ
DYGTDLQHLLDTLNLKNVWLVGHSLGGSIALWGAAICPERVRGIICINAGGGIYLKEDFEKFRNAGQNLVKNRWPFLKHL
PLLDLFFARLMVHRPLSRQWGKQRIHDFLQADATAALGALLETTTEQEVHYLPQLVAQLGQPVYFLAGQQDPVMELKYVR
HLASFHPSFGCMGNNVREIDHCGHLAMVEQVVSVEENIRKILNQYHP

Sequences:

>Translated_287_residues
MLHAYDFTPSDRPADPAGEETEYPTLVFIHGWLLSRAYWQPLIDLLKQDYACLAYDLRGFGESAAKTQGDRYPDQGYTLQ
DYGTDLQHLLDTLNLKNVWLVGHSLGGSIALWGAAICPERVRGIICINAGGGIYLKEDFEKFRNAGQNLVKNRWPFLKHL
PLLDLFFARLMVHRPLSRQWGKQRIHDFLQADATAALGALLETTTEQEVHYLPQLVAQLGQPVYFLAGQQDPVMELKYVR
HLASFHPSFGCMGNNVREIDHCGHLAMVEQVVSVEENIRKILNQYHP
>Mature_287_residues
MLHAYDFTPSDRPADPAGEETEYPTLVFIHGWLLSRAYWQPLIDLLKQDYACLAYDLRGFGESAAKTQGDRYPDQGYTLQ
DYGTDLQHLLDTLNLKNVWLVGHSLGGSIALWGAAICPERVRGIICINAGGGIYLKEDFEKFRNAGQNLVKNRWPFLKHL
PLLDLFFARLMVHRPLSRQWGKQRIHDFLQADATAALGALLETTTEQEVHYLPQLVAQLGQPVYFLAGQQDPVMELKYVR
HLASFHPSFGCMGNNVREIDHCGHLAMVEQVVSVEENIRKILNQYHP

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 32600; Mature: 32600

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHAYDFTPSDRPADPAGEETEYPTLVFIHGWLLSRAYWQPLIDLLKQDYACLAYDLRGF
CCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
GESAAKTQGDRYPDQGYTLQDYGTDLQHLLDTLNLKNVWLVGHSLGGSIALWGAAICPER
CCHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCHHH
VRGIICINAGGGIYLKEDFEKFRNAGQNLVKNRWPFLKHLPLLDLFFARLMVHRPLSRQW
CCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCHHHHH
GKQRIHDFLQADATAALGALLETTTEQEVHYLPQLVAQLGQPVYFLAGQQDPVMELKYVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH
HLASFHPSFGCMGNNVREIDHCGHLAMVEQVVSVEENIRKILNQYHP
HHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLHAYDFTPSDRPADPAGEETEYPTLVFIHGWLLSRAYWQPLIDLLKQDYACLAYDLRGF
CCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
GESAAKTQGDRYPDQGYTLQDYGTDLQHLLDTLNLKNVWLVGHSLGGSIALWGAAICPER
CCHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCHHH
VRGIICINAGGGIYLKEDFEKFRNAGQNLVKNRWPFLKHLPLLDLFFARLMVHRPLSRQW
CCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCHHHHH
GKQRIHDFLQADATAALGALLETTTEQEVHYLPQLVAQLGQPVYFLAGQQDPVMELKYVR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH
HLASFHPSFGCMGNNVREIDHCGHLAMVEQVVSVEENIRKILNQYHP
HHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA