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The map label for this gene is perM [H]

Identifier: 170078184

GI number: 170078184

Start: 1658093

End: 1659301

Strand: Reverse

Name: perM [H]

Synonym: SYNPCC7002_A1575

Alternate gene names: 170078184

Gene position: 1659301-1658093 (Counterclockwise)

Preceding gene: 170078185

Following gene: 170078183

Centisome position: 55.16

GC content: 47.31

Gene sequence:

>1209_bases
GTGGATTTTCGGAAATGGAGCGGCTTCATTGTTCTTCTAAGTTCCCTTTACATTCTCTGGCAAATTAAAGCGTTTTTACT
GTTGTTACTCACGGCGGTGATCCTAGCTAATGCTCTCAATGTGCTGGTAGTCAAGCTGCAAACCTGGGGCGATCGCCTCG
CGGACCGTTTCAACCAACCACTCCTGCGAATGGGGCGTTCTTTTGCGGTATTTACCGCCCTGTTTATCGTGGCGTTGATC
CTGTGGCTCGCTTTAACCATTGTCATTCCACCCTTTATTGGTCAGTTTCAGATTTTGTTTAGCAAGCTTAATACGGGCTT
CTATGAAATTGATGAGTGGTTAGATTCACAAATTCTCAAAATTGAAGAAAACTTTGGCTTGCCGATTAGTGAACAGTTGC
CAAATCTTGATGAGATAATTCCCCAAATCTCCACCCTGCTCAATGAACTGCTCAATCGCGGCTGGAGCCTCTTTTCTGAC
TCCCTCAAGGTGCTTTTAAATGTCTTACTACTCACGGTTTTAACCTTGATGTTTCTGGCAGATCCCCAACCCTATCGCCA
GGGATTTATTCGGTTGTTTCCTTCTTTTTATCGCCGACGAGCAGACGAAATCCTCACCCTCTGCGACGCTGACCTCAAGG
GCTGGGTATCGGGCATTATGTTCAATATGTTGTGTATTGGTGTGTTGAGTTATGTGGGCCTTTTGACTTTGGGATTGTCA
TTGGCCTTACCCCAGGCGATTTTGGCAGGTTTGCTCACTTTTATTCCTAACATTGGTCCAGCTTTGAGCGTAATTCCTCC
GATCCTTATTGCTTTGTTAGAAGCCCCTTGGAAAATTTGGGCCGTCTTGATCTTGTATTTTTTGATTCAGCAAGTAGAGG
GTAATGTTTTGACCCCCTGGGTGATGGCCCGGCAAGTATCCCTGCTCCCTGCCGTCACGCTTTTGGCCCAGGTTTTGTTT
GCTGTGACATTGCAGTTGGGTTTTTTTGGGCTGTTTTTGGCGTTACCCCTGGCGGTTATCGGCCAAGTAATCGTTCGGGA
AGTATTAGTTAAAGATATTTTGGATCCTTGGCAGGCGAGGGAAGAAGGCCAAGTGCTGGCGATGGTCTCCGGAATTGTGG
GTATTGAAACTAGCCAATCCGTGGCGCCAGAACCGGAAGCAAAAACGCCTGAATTGCCGACGGATCATCCGCCGGAGTCC
CCCAGTTAA

Upstream 100 bases:

>100_bases
GTGGTGGCGGAGTATGTCCCAGACTTCCTAAAAGGGCAAGGGTTAGCCAAAACTAAGACATAATCAAAACAACAGCACTA
ACTTGAGGCGTGTGAGTAAC

Downstream 100 bases:

>100_bases
GGGAAACTTTGTGTACCCTTGTTAGGAGTGATTTTATTCTGGTTGAGGAATTGATGTATGGGTGCGTCCCGGAGTGATTG
GCGATCGCCAGTGGTCTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDFRKWSGFIVLLSSLYILWQIKAFLLLLLTAVILANALNVLVVKLQTWGDRLADRFNQPLLRMGRSFAVFTALFIVALI
LWLALTIVIPPFIGQFQILFSKLNTGFYEIDEWLDSQILKIEENFGLPISEQLPNLDEIIPQISTLLNELLNRGWSLFSD
SLKVLLNVLLLTVLTLMFLADPQPYRQGFIRLFPSFYRRRADEILTLCDADLKGWVSGIMFNMLCIGVLSYVGLLTLGLS
LALPQAILAGLLTFIPNIGPALSVIPPILIALLEAPWKIWAVLILYFLIQQVEGNVLTPWVMARQVSLLPAVTLLAQVLF
AVTLQLGFFGLFLALPLAVIGQVIVREVLVKDILDPWQAREEGQVLAMVSGIVGIETSQSVAPEPEAKTPELPTDHPPES
PS

Sequences:

>Translated_402_residues
MDFRKWSGFIVLLSSLYILWQIKAFLLLLLTAVILANALNVLVVKLQTWGDRLADRFNQPLLRMGRSFAVFTALFIVALI
LWLALTIVIPPFIGQFQILFSKLNTGFYEIDEWLDSQILKIEENFGLPISEQLPNLDEIIPQISTLLNELLNRGWSLFSD
SLKVLLNVLLLTVLTLMFLADPQPYRQGFIRLFPSFYRRRADEILTLCDADLKGWVSGIMFNMLCIGVLSYVGLLTLGLS
LALPQAILAGLLTFIPNIGPALSVIPPILIALLEAPWKIWAVLILYFLIQQVEGNVLTPWVMARQVSLLPAVTLLAQVLF
AVTLQLGFFGLFLALPLAVIGQVIVREVLVKDILDPWQAREEGQVLAMVSGIVGIETSQSVAPEPEAKTPELPTDHPPES
PS
>Mature_402_residues
MDFRKWSGFIVLLSSLYILWQIKAFLLLLLTAVILANALNVLVVKLQTWGDRLADRFNQPLLRMGRSFAVFTALFIVALI
LWLALTIVIPPFIGQFQILFSKLNTGFYEIDEWLDSQILKIEENFGLPISEQLPNLDEIIPQISTLLNELLNRGWSLFSD
SLKVLLNVLLLTVLTLMFLADPQPYRQGFIRLFPSFYRRRADEILTLCDADLKGWVSGIMFNMLCIGVLSYVGLLTLGLS
LALPQAILAGLLTFIPNIGPALSVIPPILIALLEAPWKIWAVLILYFLIQQVEGNVLTPWVMARQVSLLPAVTLLAQVLF
AVTLQLGFFGLFLALPLAVIGQVIVREVLVKDILDPWQAREEGQVLAMVSGIVGIETSQSVAPEPEAKTPELPTDHPPES
PS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=368, Percent_Identity=24.7282608695652, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 44837; Mature: 44837

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]