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The map label for this gene is yfcH [C]

Identifier: 170078181

GI number: 170078181

Start: 1655190

End: 1656113

Strand: Reverse

Name: yfcH [C]

Synonym: SYNPCC7002_A1572

Alternate gene names: 170078181

Gene position: 1656113-1655190 (Counterclockwise)

Preceding gene: 170078183

Following gene: 170078180

Centisome position: 55.06

GC content: 52.92

Gene sequence:

>924_bases
ATGAAAATTGCGATTACCGGTGCAACAGGTCTTGTGGGGCAACGTTCGGTTGAGCGTTTGTACCCTGCCCATGAGCTTTT
AGTCTTGACCCGCAGTGAGGCCAAAGCCCAAGGCATCTTTCCGGCTTCTGTCTATCCAAAGCTCAAGATTGTGGCCTATA
CCCCCACGGAGTCAGGCCCCTGGCAGGACTGTATCTCTGGCTGTGATGCGGTGGTGAATCTGGCTGGGGCTCCCATTGCG
GAACAACGGTGGACACCAAGCTATAAGCAGGAAATTCACCATAGTCGCCAGGGGGGGACAGAAAAGATCGTCGAGGCGAT
CGCCAAAGCCAATCAAAAACCCCAGGTACTCATTAATCCCTCCGCCGTCGGCTATTACGGCACCAGTGAAACCGCCATCT
ACACTGAAACAAGCCCTCCCGGTAACGACTTTCTCGCAGACGTTTGTCAAGCATGGGAAACTGCGGCCCTAGAAGCCCAA
AACCACGGCACTCGTACCGTCATTCTCCGGTTTGGGATTGTCCTCGCCAAAGAAGGAGGAGCCCTCGCCAAGATGATTCT
CGCTTTTAATACCTTTGTCGGCGGCCCCCTCGGCACAGGTAAACAATGGGTTTCTTGGATTCACCGCGATGATCTCGTTA
GCTTGATTGAAATGGCCCTTACCCAAGCCGATTGGCAAGGCACCTACAACGGCACTGCCCCCAATCCAGTCACCATGGAA
ACCCTCGCCCAGACCCTAGGATCTGTAATGAAACGTCCTGCTTGGCTCCCAGTACCGGGCTTTGTTTTAGAATTACTCCT
CAGCGATGGTGCGAAAGTCGTATTAGAAGGGCAAAAAGTGCTACCCAAACGAACCGAAGAGGCTGGCTTCCAGTTTAAAT
TTCCGGATCTCAAAGCTGCCCTGGTTGATTTACTGGCTAGTTAA

Upstream 100 bases:

>100_bases
CGCCTATGCTAGCACAGCTCTCAAAGACAGGGGGCGTTGTCGCCACTGGGGCCATTACGCCACAATTTGTGTATATCCTT
GATGATTTAAACTTTTTTCA

Downstream 100 bases:

>100_bases
TTCCCCGACAGCCGAATGGTTTAGCCAGACTTGTGAGAGTCAGCAGCCTATTATTTTGATAAAGATTTATCGTATTTTTT
TACAAACCATGTCTGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MKIAITGATGLVGQRSVERLYPAHELLVLTRSEAKAQGIFPASVYPKLKIVAYTPTESGPWQDCISGCDAVVNLAGAPIA
EQRWTPSYKQEIHHSRQGGTEKIVEAIAKANQKPQVLINPSAVGYYGTSETAIYTETSPPGNDFLADVCQAWETAALEAQ
NHGTRTVILRFGIVLAKEGGALAKMILAFNTFVGGPLGTGKQWVSWIHRDDLVSLIEMALTQADWQGTYNGTAPNPVTME
TLAQTLGSVMKRPAWLPVPGFVLELLLSDGAKVVLEGQKVLPKRTEEAGFQFKFPDLKAALVDLLAS

Sequences:

>Translated_307_residues
MKIAITGATGLVGQRSVERLYPAHELLVLTRSEAKAQGIFPASVYPKLKIVAYTPTESGPWQDCISGCDAVVNLAGAPIA
EQRWTPSYKQEIHHSRQGGTEKIVEAIAKANQKPQVLINPSAVGYYGTSETAIYTETSPPGNDFLADVCQAWETAALEAQ
NHGTRTVILRFGIVLAKEGGALAKMILAFNTFVGGPLGTGKQWVSWIHRDDLVSLIEMALTQADWQGTYNGTAPNPVTME
TLAQTLGSVMKRPAWLPVPGFVLELLLSDGAKVVLEGQKVLPKRTEEAGFQFKFPDLKAALVDLLAS
>Mature_307_residues
MKIAITGATGLVGQRSVERLYPAHELLVLTRSEAKAQGIFPASVYPKLKIVAYTPTESGPWQDCISGCDAVVNLAGAPIA
EQRWTPSYKQEIHHSRQGGTEKIVEAIAKANQKPQVLINPSAVGYYGTSETAIYTETSPPGNDFLADVCQAWETAALEAQ
NHGTRTVILRFGIVLAKEGGALAKMILAFNTFVGGPLGTGKQWVSWIHRDDLVSLIEMALTQADWQGTYNGTAPNPVTME
TLAQTLGSVMKRPAWLPVPGFVLELLLSDGAKVVLEGQKVLPKRTEEAGFQFKFPDLKAALVDLLAS

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=311, Percent_Identity=35.6913183279743, Blast_Score=181, Evalue=1e-45,
Organism=Escherichia coli, GI1788642, Length=306, Percent_Identity=41.5032679738562, Blast_Score=234, Evalue=4e-63,
Organism=Drosophila melanogaster, GI28573846, Length=308, Percent_Identity=31.8181818181818, Blast_Score=144, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33113; Mature: 33113

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAITGATGLVGQRSVERLYPAHELLVLTRSEAKAQGIFPASVYPKLKIVAYTPTESGP
CEEEEECCCCCHHHHHHHHHCCHHHEEEEECCCHHHCCCCCCCCCCCEEEEEECCCCCCC
WQDCISGCDAVVNLAGAPIAEQRWTPSYKQEIHHSRQGGTEKIVEAIAKANQKPQVLINP
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECC
SAVGYYGTSETAIYTETSPPGNDFLADVCQAWETAALEAQNHGTRTVILRFGIVLAKEGG
CCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCC
ALAKMILAFNTFVGGPLGTGKQWVSWIHRDDLVSLIEMALTQADWQGTYNGTAPNPVTME
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH
TLAQTLGSVMKRPAWLPVPGFVLELLLSDGAKVVLEGQKVLPKRTEEAGFQFKFPDLKAA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCHHCCCCHHHCCCEEECCHHHHH
LVDLLAS
HHHHHCC
>Mature Secondary Structure
MKIAITGATGLVGQRSVERLYPAHELLVLTRSEAKAQGIFPASVYPKLKIVAYTPTESGP
CEEEEECCCCCHHHHHHHHHCCHHHEEEEECCCHHHCCCCCCCCCCCEEEEEECCCCCCC
WQDCISGCDAVVNLAGAPIAEQRWTPSYKQEIHHSRQGGTEKIVEAIAKANQKPQVLINP
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEECC
SAVGYYGTSETAIYTETSPPGNDFLADVCQAWETAALEAQNHGTRTVILRFGIVLAKEGG
CCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCC
ALAKMILAFNTFVGGPLGTGKQWVSWIHRDDLVSLIEMALTQADWQGTYNGTAPNPVTME
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHH
TLAQTLGSVMKRPAWLPVPGFVLELLLSDGAKVVLEGQKVLPKRTEEAGFQFKFPDLKAA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEECCHHCCCCHHHCCCEEECCHHHHH
LVDLLAS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]