Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078148

Identifier: 170078148

GI number: 170078148

Start: 1625384

End: 1625836

Strand: Direct

Name: 170078148

Synonym: SYNPCC7002_A1539

Alternate gene names: NA

Gene position: 1625384-1625836 (Clockwise)

Preceding gene: 170078146

Following gene: 170078149

Centisome position: 54.03

GC content: 52.54

Gene sequence:

>453_bases
ATGCCTCTTTTCTCTGATAAGGCCACCACAGGCAAACAAAAGAAACAGAAATTTTGGACAAAAGTGATCCTGATTATTGG
TGCGGGCTCCTTTGCGGGAACTGCGATGGTGCCAGTGATCGGGGGTATCATTGATAGCGTGCGACAACCGACAACCGAAG
TGGCTCGGAATCCCCAGGCGGATCAAGAAGCTCAACTCAAACAACAAGAAGCCGGATTTTTGGCGGTTTTAGAACGGGAG
CCAGACAATACAAATGCGCTGCAAGGTTTGGTGCAGGCCCGTTTAGCCCTGGGGGATTTAGCAGGGGCACGTCCCCATTT
GCAACGGTTGGTGGAGTTATATCCGGATGAACAGGTGCTTAAGGATCTCTTAGCCCAAGTGGACGAGGCTTTGGCACGCA
CTGGCAAGACAACTCCGGCCCAGTCTCCCACCGAAAATCCGGAAACGCCCTAG

Upstream 100 bases:

>100_bases
CTTCGGGAAATGGCAGCCTTTCCCATTAAATCCCATTTTCTAGAACTCCCATGGCCATGGGCTAAAATAGATAGGATTTT
TAAGTCATCCCCCTCAACCC

Downstream 100 bases:

>100_bases
GCGATCGCCTTTTTGCTTGTTTATGGAGTCTAGGTCGCCACTGTTATTCCTATTGCTCCTCTTCCTGGGGGGAGGGACTG
TTCTGCTACTGCAAAATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPLFSDKATTGKQKKQKFWTKVILIIGAGSFAGTAMVPVIGGIIDSVRQPTTEVARNPQADQEAQLKQQEAGFLAVLERE
PDNTNALQGLVQARLALGDLAGARPHLQRLVELYPDEQVLKDLLAQVDEALARTGKTTPAQSPTENPETP

Sequences:

>Translated_150_residues
MPLFSDKATTGKQKKQKFWTKVILIIGAGSFAGTAMVPVIGGIIDSVRQPTTEVARNPQADQEAQLKQQEAGFLAVLERE
PDNTNALQGLVQARLALGDLAGARPHLQRLVELYPDEQVLKDLLAQVDEALARTGKTTPAQSPTENPETP
>Mature_149_residues
PLFSDKATTGKQKKQKFWTKVILIIGAGSFAGTAMVPVIGGIIDSVRQPTTEVARNPQADQEAQLKQQEAGFLAVLEREP
DNTNALQGLVQARLALGDLAGARPHLQRLVELYPDEQVLKDLLAQVDEALARTGKTTPAQSPTENPETP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16196; Mature: 16064

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLFSDKATTGKQKKQKFWTKVILIIGAGSFAGTAMVPVIGGIIDSVRQPTTEVARNPQA
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
DQEAQLKQQEAGFLAVLEREPDNTNALQGLVQARLALGDLAGARPHLQRLVELYPDEQVL
CHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
KDLLAQVDEALARTGKTTPAQSPTENPETP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLFSDKATTGKQKKQKFWTKVILIIGAGSFAGTAMVPVIGGIIDSVRQPTTEVARNPQA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
DQEAQLKQQEAGFLAVLEREPDNTNALQGLVQARLALGDLAGARPHLQRLVELYPDEQVL
CHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
KDLLAQVDEALARTGKTTPAQSPTENPETP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA