Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078118

Identifier: 170078118

GI number: 170078118

Start: 1594803

End: 1595777

Strand: Direct

Name: 170078118

Synonym: SYNPCC7002_A1509

Alternate gene names: NA

Gene position: 1594803-1595777 (Clockwise)

Preceding gene: 170078117

Following gene: 170078119

Centisome position: 53.02

GC content: 31.08

Gene sequence:

>975_bases
TTGCTTCTTCATCACGCTAACTACACCTTAGATTTTTTGTCTCCAGCCAGGCCGTTTCATCTACACAAGCTTCTTCAACG
TTTTGCTGTAGGAGGGTTTATTTTTCTTTCTGGATTCAAGCTGACAAAGTCAAAATTGAAATCTAGTATAAGCGAATTTG
TTATAAATCGGTTTTCGAAAATATATGGATTATATTTTTTATCAGTAATAATTTTTTCTACCACTGCTTACCCTTATTTG
AACAATGAAAATTTTCCTTCAATTAAAAATACACTTCTACATTTAGTTGCTCTTCAGGCGATTTTGCCTGACCACTTTGG
CAATAATTTTCACACACTCTGGTTCGTAAGCGTACTCCTCATTTGTTACTCAGCATTTCTTATTTTTAGAGCATGGCTGA
CCGATTTATCTAAATTTATTTTATGGGTATCTGGATTCACACTATCTATCTCAATCATAAGAATAATTTTTCTTCAGCGC
GGAATCTATTTGTTTCAATATGACTTAGAGCTATGGCTACTCATTTTTTTTGCAGGGATGATAAATGCAGATAGAAATCT
GAGTCTGGAGATTAAAGAATATTATCTGATTTTTGCTAAGTTTGCTATTATTTTTGGATTATCTATTCTTCTTTTTCTGT
ATAACTATTCAGGCGATATTCCTGCAAATATATTTCGAATTATAGAAATATTCGGTGCACTTATTTTTCTTTTTCCTTCA
TACAGCTTGATCTTAAGAAAACATTTTATCTTTCATCCTTATGTAATCTTTATTCTAAAATATATTGCGGCTTCATCATA
CTGTATATTCTTATTACATCGATCTATTTGGACCGTACTTTTTTATCTTTTTTCGGATAGAACAATTGTCCAATCGTTAT
TTATTCTGGGCTTAGGAGTACCATTAATTTGTCTAATTAGTTATCTGTTTCAATCCTCATATACTAGTCTCACTAAAATT
AATACTAAAAGATAG

Upstream 100 bases:

>100_bases
ATTGAATAGGACTCTACATTTTTACACTATTATGAGAAAACAAGAAGATAGATGTATTGATTCGGTAATTGTTTTAACAG
TTATTTGTACATTGTCAGTA

Downstream 100 bases:

>100_bases
TATCTCAACTCTTAGCGTGAAAATTTGGCATTTTACGAAAACAATTTATGGTGGTTCTGGGCAATATACTTTGCGCTTAA
GTAATGCACTAAAAGCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MLLHHANYTLDFLSPARPFHLHKLLQRFAVGGFIFLSGFKLTKSKLKSSISEFVINRFSKIYGLYFLSVIIFSTTAYPYL
NNENFPSIKNTLLHLVALQAILPDHFGNNFHTLWFVSVLLICYSAFLIFRAWLTDLSKFILWVSGFTLSISIIRIIFLQR
GIYLFQYDLELWLLIFFAGMINADRNLSLEIKEYYLIFAKFAIIFGLSILLFLYNYSGDIPANIFRIIEIFGALIFLFPS
YSLILRKHFIFHPYVIFILKYIAASSYCIFLLHRSIWTVLFYLFSDRTIVQSLFILGLGVPLICLISYLFQSSYTSLTKI
NTKR

Sequences:

>Translated_324_residues
MLLHHANYTLDFLSPARPFHLHKLLQRFAVGGFIFLSGFKLTKSKLKSSISEFVINRFSKIYGLYFLSVIIFSTTAYPYL
NNENFPSIKNTLLHLVALQAILPDHFGNNFHTLWFVSVLLICYSAFLIFRAWLTDLSKFILWVSGFTLSISIIRIIFLQR
GIYLFQYDLELWLLIFFAGMINADRNLSLEIKEYYLIFAKFAIIFGLSILLFLYNYSGDIPANIFRIIEIFGALIFLFPS
YSLILRKHFIFHPYVIFILKYIAASSYCIFLLHRSIWTVLFYLFSDRTIVQSLFILGLGVPLICLISYLFQSSYTSLTKI
NTKR
>Mature_324_residues
MLLHHANYTLDFLSPARPFHLHKLLQRFAVGGFIFLSGFKLTKSKLKSSISEFVINRFSKIYGLYFLSVIIFSTTAYPYL
NNENFPSIKNTLLHLVALQAILPDHFGNNFHTLWFVSVLLICYSAFLIFRAWLTDLSKFILWVSGFTLSISIIRIIFLQR
GIYLFQYDLELWLLIFFAGMINADRNLSLEIKEYYLIFAKFAIIFGLSILLFLYNYSGDIPANIFRIIEIFGALIFLFPS
YSLILRKHFIFHPYVIFILKYIAASSYCIFLLHRSIWTVLFYLFSDRTIVQSLFILGLGVPLICLISYLFQSSYTSLTKI
NTKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37834; Mature: 37834

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHHANYTLDFLSPARPFHLHKLLQRFAVGGFIFLSGFKLTKSKLKSSISEFVINRFSK
CEEECCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
IYGLYFLSVIIFSTTAYPYLNNENFPSIKNTLLHLVALQAILPDHFGNNFHTLWFVSVLL
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ICYSAFLIFRAWLTDLSKFILWVSGFTLSISIIRIIFLQRGIYLFQYDLELWLLIFFAGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHH
INADRNLSLEIKEYYLIFAKFAIIFGLSILLFLYNYSGDIPANIFRIIEIFGALIFLFPS
HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
YSLILRKHFIFHPYVIFILKYIAASSYCIFLLHRSIWTVLFYLFSDRTIVQSLFILGLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
PLICLISYLFQSSYTSLTKINTKR
HHHHHHHHHHHHCCHHHHHCCCCC
>Mature Secondary Structure
MLLHHANYTLDFLSPARPFHLHKLLQRFAVGGFIFLSGFKLTKSKLKSSISEFVINRFSK
CEEECCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
IYGLYFLSVIIFSTTAYPYLNNENFPSIKNTLLHLVALQAILPDHFGNNFHTLWFVSVLL
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ICYSAFLIFRAWLTDLSKFILWVSGFTLSISIIRIIFLQRGIYLFQYDLELWLLIFFAGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHH
INADRNLSLEIKEYYLIFAKFAIIFGLSILLFLYNYSGDIPANIFRIIEIFGALIFLFPS
HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
YSLILRKHFIFHPYVIFILKYIAASSYCIFLLHRSIWTVLFYLFSDRTIVQSLFILGLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
PLICLISYLFQSSYTSLTKINTKR
HHHHHHHHHHHHCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA