| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078118
Identifier: 170078118
GI number: 170078118
Start: 1594803
End: 1595777
Strand: Direct
Name: 170078118
Synonym: SYNPCC7002_A1509
Alternate gene names: NA
Gene position: 1594803-1595777 (Clockwise)
Preceding gene: 170078117
Following gene: 170078119
Centisome position: 53.02
GC content: 31.08
Gene sequence:
>975_bases TTGCTTCTTCATCACGCTAACTACACCTTAGATTTTTTGTCTCCAGCCAGGCCGTTTCATCTACACAAGCTTCTTCAACG TTTTGCTGTAGGAGGGTTTATTTTTCTTTCTGGATTCAAGCTGACAAAGTCAAAATTGAAATCTAGTATAAGCGAATTTG TTATAAATCGGTTTTCGAAAATATATGGATTATATTTTTTATCAGTAATAATTTTTTCTACCACTGCTTACCCTTATTTG AACAATGAAAATTTTCCTTCAATTAAAAATACACTTCTACATTTAGTTGCTCTTCAGGCGATTTTGCCTGACCACTTTGG CAATAATTTTCACACACTCTGGTTCGTAAGCGTACTCCTCATTTGTTACTCAGCATTTCTTATTTTTAGAGCATGGCTGA CCGATTTATCTAAATTTATTTTATGGGTATCTGGATTCACACTATCTATCTCAATCATAAGAATAATTTTTCTTCAGCGC GGAATCTATTTGTTTCAATATGACTTAGAGCTATGGCTACTCATTTTTTTTGCAGGGATGATAAATGCAGATAGAAATCT GAGTCTGGAGATTAAAGAATATTATCTGATTTTTGCTAAGTTTGCTATTATTTTTGGATTATCTATTCTTCTTTTTCTGT ATAACTATTCAGGCGATATTCCTGCAAATATATTTCGAATTATAGAAATATTCGGTGCACTTATTTTTCTTTTTCCTTCA TACAGCTTGATCTTAAGAAAACATTTTATCTTTCATCCTTATGTAATCTTTATTCTAAAATATATTGCGGCTTCATCATA CTGTATATTCTTATTACATCGATCTATTTGGACCGTACTTTTTTATCTTTTTTCGGATAGAACAATTGTCCAATCGTTAT TTATTCTGGGCTTAGGAGTACCATTAATTTGTCTAATTAGTTATCTGTTTCAATCCTCATATACTAGTCTCACTAAAATT AATACTAAAAGATAG
Upstream 100 bases:
>100_bases ATTGAATAGGACTCTACATTTTTACACTATTATGAGAAAACAAGAAGATAGATGTATTGATTCGGTAATTGTTTTAACAG TTATTTGTACATTGTCAGTA
Downstream 100 bases:
>100_bases TATCTCAACTCTTAGCGTGAAAATTTGGCATTTTACGAAAACAATTTATGGTGGTTCTGGGCAATATACTTTGCGCTTAA GTAATGCACTAAAAGCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MLLHHANYTLDFLSPARPFHLHKLLQRFAVGGFIFLSGFKLTKSKLKSSISEFVINRFSKIYGLYFLSVIIFSTTAYPYL NNENFPSIKNTLLHLVALQAILPDHFGNNFHTLWFVSVLLICYSAFLIFRAWLTDLSKFILWVSGFTLSISIIRIIFLQR GIYLFQYDLELWLLIFFAGMINADRNLSLEIKEYYLIFAKFAIIFGLSILLFLYNYSGDIPANIFRIIEIFGALIFLFPS YSLILRKHFIFHPYVIFILKYIAASSYCIFLLHRSIWTVLFYLFSDRTIVQSLFILGLGVPLICLISYLFQSSYTSLTKI NTKR
Sequences:
>Translated_324_residues MLLHHANYTLDFLSPARPFHLHKLLQRFAVGGFIFLSGFKLTKSKLKSSISEFVINRFSKIYGLYFLSVIIFSTTAYPYL NNENFPSIKNTLLHLVALQAILPDHFGNNFHTLWFVSVLLICYSAFLIFRAWLTDLSKFILWVSGFTLSISIIRIIFLQR GIYLFQYDLELWLLIFFAGMINADRNLSLEIKEYYLIFAKFAIIFGLSILLFLYNYSGDIPANIFRIIEIFGALIFLFPS YSLILRKHFIFHPYVIFILKYIAASSYCIFLLHRSIWTVLFYLFSDRTIVQSLFILGLGVPLICLISYLFQSSYTSLTKI NTKR >Mature_324_residues MLLHHANYTLDFLSPARPFHLHKLLQRFAVGGFIFLSGFKLTKSKLKSSISEFVINRFSKIYGLYFLSVIIFSTTAYPYL NNENFPSIKNTLLHLVALQAILPDHFGNNFHTLWFVSVLLICYSAFLIFRAWLTDLSKFILWVSGFTLSISIIRIIFLQR GIYLFQYDLELWLLIFFAGMINADRNLSLEIKEYYLIFAKFAIIFGLSILLFLYNYSGDIPANIFRIIEIFGALIFLFPS YSLILRKHFIFHPYVIFILKYIAASSYCIFLLHRSIWTVLFYLFSDRTIVQSLFILGLGVPLICLISYLFQSSYTSLTKI NTKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37834; Mature: 37834
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLHHANYTLDFLSPARPFHLHKLLQRFAVGGFIFLSGFKLTKSKLKSSISEFVINRFSK CEEECCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH IYGLYFLSVIIFSTTAYPYLNNENFPSIKNTLLHLVALQAILPDHFGNNFHTLWFVSVLL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ICYSAFLIFRAWLTDLSKFILWVSGFTLSISIIRIIFLQRGIYLFQYDLELWLLIFFAGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHH INADRNLSLEIKEYYLIFAKFAIIFGLSILLFLYNYSGDIPANIFRIIEIFGALIFLFPS HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH YSLILRKHFIFHPYVIFILKYIAASSYCIFLLHRSIWTVLFYLFSDRTIVQSLFILGLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH PLICLISYLFQSSYTSLTKINTKR HHHHHHHHHHHHCCHHHHHCCCCC >Mature Secondary Structure MLLHHANYTLDFLSPARPFHLHKLLQRFAVGGFIFLSGFKLTKSKLKSSISEFVINRFSK CEEECCCCEEECCCCCCCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH IYGLYFLSVIIFSTTAYPYLNNENFPSIKNTLLHLVALQAILPDHFGNNFHTLWFVSVLL HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ICYSAFLIFRAWLTDLSKFILWVSGFTLSISIIRIIFLQRGIYLFQYDLELWLLIFFAGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHH INADRNLSLEIKEYYLIFAKFAIIFGLSILLFLYNYSGDIPANIFRIIEIFGALIFLFPS HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH YSLILRKHFIFHPYVIFILKYIAASSYCIFLLHRSIWTVLFYLFSDRTIVQSLFILGLGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH PLICLISYLFQSSYTSLTKINTKR HHHHHHHHHHHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA