| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078079
Identifier: 170078079
GI number: 170078079
Start: 1547941
End: 1548291
Strand: Reverse
Name: 170078079
Synonym: SYNPCC7002_A1470
Alternate gene names: NA
Gene position: 1548291-1547941 (Counterclockwise)
Preceding gene: 170078080
Following gene: 170078078
Centisome position: 51.47
GC content: 46.72
Gene sequence:
>351_bases ATGATTATCACTACTTTTCTCCGTCACCACTCCCTCAAACTCGCCCTTACCTTCGCAATCTTTGGTTTCTTATGCTGGCT TTATTGCCTTTCGCCCCTGACCCTCAACCTTAGTCAACTCCAGCAAGTCGCCATCTACATTGGCCTCGAAGTTTTGTATG ATATGCTGCGCCACTGGTGTTTAAAGTTGGTACAAAGTGGTTGCGATCGCCTCCGCCATGTCTCTCCCTTTGTGAACGAT TTGTTTGCAGTTGTGACCAAACTGGCAACCGATGGCCGTAATTTTAAAATTCATCTCCCCACGGTTACGGGACAAATGTG GACGATTTATCCCCTGCGTGTTCTTTCTTAA
Upstream 100 bases:
>100_bases CCAACCTGTTAGGGGGCTTTTGCTGTGGGTAGCCAAATACTGCATCTGTTCTGGGGCGTAGCAACTATCAAGCAGTACCA CAACAGAGCAGGCCAGTCCG
Downstream 100 bases:
>100_bases AAAGTCAAGTCTGCTCTAAGCTTTGTGGCCTGTGGTATCGCCAACAAATTTCAAAAATAGCTGTTCTTAGACTGTCGTTT TCCCCAGAAAGTTCCGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MIITTFLRHHSLKLALTFAIFGFLCWLYCLSPLTLNLSQLQQVAIYIGLEVLYDMLRHWCLKLVQSGCDRLRHVSPFVND LFAVVTKLATDGRNFKIHLPTVTGQMWTIYPLRVLS
Sequences:
>Translated_116_residues MIITTFLRHHSLKLALTFAIFGFLCWLYCLSPLTLNLSQLQQVAIYIGLEVLYDMLRHWCLKLVQSGCDRLRHVSPFVND LFAVVTKLATDGRNFKIHLPTVTGQMWTIYPLRVLS >Mature_116_residues MIITTFLRHHSLKLALTFAIFGFLCWLYCLSPLTLNLSQLQQVAIYIGLEVLYDMLRHWCLKLVQSGCDRLRHVSPFVND LFAVVTKLATDGRNFKIHLPTVTGQMWTIYPLRVLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13409; Mature: 13409
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITTFLRHHSLKLALTFAIFGFLCWLYCLSPLTLNLSQLQQVAIYIGLEVLYDMLRHWC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LKLVQSGCDRLRHVSPFVNDLFAVVTKLATDGRNFKIHLPTVTGQMWTIYPLRVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEECCCEEEEHHHEECC >Mature Secondary Structure MIITTFLRHHSLKLALTFAIFGFLCWLYCLSPLTLNLSQLQQVAIYIGLEVLYDMLRHWC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LKLVQSGCDRLRHVSPFVNDLFAVVTKLATDGRNFKIHLPTVTGQMWTIYPLRVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEECCCEEEEHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA