| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is tal [H]
Identifier: 170078069
GI number: 170078069
Start: 1534054
End: 1535199
Strand: Reverse
Name: tal [H]
Synonym: SYNPCC7002_A1460
Alternate gene names: 170078069
Gene position: 1535199-1534054 (Counterclockwise)
Preceding gene: 170078070
Following gene: 170078068
Centisome position: 51.04
GC content: 51.05
Gene sequence:
>1146_bases ATGGCTACCGCAAACCCGATTATTGATATTGAAGACTATGGTCAAAGTATCTGGATGGATAACCTCAGTCGGGATTTAAT CACCTCTGGGGAATTGGCACAATTGATCGACAGTCGGGGAATCCATGGGATTACCTCTAATCCAGCGATTTTTGAAAAGG CGATCGCCGGCAACGAAATTTACGACGAAGCGATCAAGCAGGGCATTGCGGCCGGAAAATCCACCCTCGAAATTTATGAA TCCATTGTGTTTGAGGACATCAGCAACGCCTGTGATATTTTTGCTGGGGTCTACGAAAAGACCGACGCCCTCGATGGCTA TGTGAGCATTGAAGTTCCCCCCAATATTGCCAAGGATACCGAAAGCACGATCAAAGAAGCCCGCCGCTATTTCAAGGAAA TTGGTCGTCCCAACGTAATGATCAAAATCCCCGGCACCCCCGAAGGTTTGCCCGCCGTCACCCAGGCGATCGCCGAAGGG ATCAACGTGAATGTCACCCTGCTTTTCTCCGTACAAGCCTACATTGACACTGCTTGGGCTTACATCGAAGGACTCGAAAA GCGGGCCGCCGCTGGCGAGGATATCAGTAAAATTGCCTCCGTCGCGAGCTTCTTCCTCAGCCGCATTGATGTGAATATCG ACAATCAATTGGATGCCAAAATCAAATCCGGGGTCAGCGAAGATGTCGCCAGCAAGCTGATCGGCCTCAAAGGAAAAGTG GCGATCGCCAACGCAAAAATTGCCTACCAACATTACCTTGAGATTTTCAGTAGCGACCGTTGGCAAGCCCTCGCCGCCAA AGGCGCGAAACCCCAACGACTCCTCTGGGCCAGCACCGGCACCAAAAATCCCGACTATAGCGATGTAATGTATGTGGATG AACTCGTTGGGGCTGACACCGTCAATACCCTCCCCCCCGACACCATCGAAGCCTGTGCCGACCACTGCGATCCCGCCAGC CGCATCACCGCCAATGTTGAACAAGCTAGACAAATCATTGCTGCCCTCGGTGACGAAGACGTGGCGATCGATCTTGACGC TGTAATGGCCGAACTTCTCGAAGAAGGGATCGAAAAATTCATCAAACCCTTTGAATCTCTCATGGACTCCCTCGAAACCA AAGTCAAACAATTGGCCACTATTTAA
Upstream 100 bases:
>100_bases AAGATCTTGTAAGTTGAGAGTAGTGCCCCCACGCACTGTATCAAAACATTAATACCCGCAGCTTGGGGGCGATCGCCGCA CACAAAAGGAGTAATGACCT
Downstream 100 bases:
>100_bases CCCATCTCACCAAAAAAAGCCCCCCTTCTGAAAGGGGGGTTACGGGGATATCAAAATCCCCTTCCAATTACCCCATTGCT CCTTCAAATCCAGCCCTATG
Product: transaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MATANPIIDIEDYGQSIWMDNLSRDLITSGELAQLIDSRGIHGITSNPAIFEKAIAGNEIYDEAIKQGIAAGKSTLEIYE SIVFEDISNACDIFAGVYEKTDALDGYVSIEVPPNIAKDTESTIKEARRYFKEIGRPNVMIKIPGTPEGLPAVTQAIAEG INVNVTLLFSVQAYIDTAWAYIEGLEKRAAAGEDISKIASVASFFLSRIDVNIDNQLDAKIKSGVSEDVASKLIGLKGKV AIANAKIAYQHYLEIFSSDRWQALAAKGAKPQRLLWASTGTKNPDYSDVMYVDELVGADTVNTLPPDTIEACADHCDPAS RITANVEQARQIIAALGDEDVAIDLDAVMAELLEEGIEKFIKPFESLMDSLETKVKQLATI
Sequences:
>Translated_381_residues MATANPIIDIEDYGQSIWMDNLSRDLITSGELAQLIDSRGIHGITSNPAIFEKAIAGNEIYDEAIKQGIAAGKSTLEIYE SIVFEDISNACDIFAGVYEKTDALDGYVSIEVPPNIAKDTESTIKEARRYFKEIGRPNVMIKIPGTPEGLPAVTQAIAEG INVNVTLLFSVQAYIDTAWAYIEGLEKRAAAGEDISKIASVASFFLSRIDVNIDNQLDAKIKSGVSEDVASKLIGLKGKV AIANAKIAYQHYLEIFSSDRWQALAAKGAKPQRLLWASTGTKNPDYSDVMYVDELVGADTVNTLPPDTIEACADHCDPAS RITANVEQARQIIAALGDEDVAIDLDAVMAELLEEGIEKFIKPFESLMDSLETKVKQLATI >Mature_380_residues ATANPIIDIEDYGQSIWMDNLSRDLITSGELAQLIDSRGIHGITSNPAIFEKAIAGNEIYDEAIKQGIAAGKSTLEIYES IVFEDISNACDIFAGVYEKTDALDGYVSIEVPPNIAKDTESTIKEARRYFKEIGRPNVMIKIPGTPEGLPAVTQAIAEGI NVNVTLLFSVQAYIDTAWAYIEGLEKRAAAGEDISKIASVASFFLSRIDVNIDNQLDAKIKSGVSEDVASKLIGLKGKVA IANAKIAYQHYLEIFSSDRWQALAAKGAKPQRLLWASTGTKNPDYSDVMYVDELVGADTVNTLPPDTIEACADHCDPASR ITANVEQARQIIAALGDEDVAIDLDAVMAELLEEGIEKFIKPFESLMDSLETKVKQLATI
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004732 - InterPro: IPR018225 - InterPro: IPR014634 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 41339; Mature: 41208
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS01054 TRANSALDOLASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATANPIIDIEDYGQSIWMDNLSRDLITSGELAQLIDSRGIHGITSNPAIFEKAIAGNEI CCCCCCCEEHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHH YDEAIKQGIAAGKSTLEIYESIVFEDISNACDIFAGVYEKTDALDGYVSIEVPPNIAKDT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCH ESTIKEARRYFKEIGRPNVMIKIPGTPEGLPAVTQAIAEGINVNVTLLFSVQAYIDTAWA HHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHH YIEGLEKRAAAGEDISKIASVASFFLSRIDVNIDNQLDAKIKSGVSEDVASKLIGLKGKV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCE AIANAKIAYQHYLEIFSSDRWQALAAKGAKPQRLLWASTGTKNPDYSDVMYVDELVGADT EEECHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCC VNTLPPDTIEACADHCDPASRITANVEQARQIIAALGDEDVAIDLDAVMAELLEEGIEKF CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH IKPFESLMDSLETKVKQLATI HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATANPIIDIEDYGQSIWMDNLSRDLITSGELAQLIDSRGIHGITSNPAIFEKAIAGNEI CCCCCCEEHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHH YDEAIKQGIAAGKSTLEIYESIVFEDISNACDIFAGVYEKTDALDGYVSIEVPPNIAKDT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCH ESTIKEARRYFKEIGRPNVMIKIPGTPEGLPAVTQAIAEGINVNVTLLFSVQAYIDTAWA HHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHH YIEGLEKRAAAGEDISKIASVASFFLSRIDVNIDNQLDAKIKSGVSEDVASKLIGLKGKV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCE AIANAKIAYQHYLEIFSSDRWQALAAKGAKPQRLLWASTGTKNPDYSDVMYVDELVGADT EEECHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCC VNTLPPDTIEACADHCDPASRITANVEQARQIIAALGDEDVAIDLDAVMAELLEEGIEKF CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH IKPFESLMDSLETKVKQLATI HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA