| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is resE [H]
Identifier: 170078060
GI number: 170078060
Start: 1524608
End: 1526119
Strand: Direct
Name: resE [H]
Synonym: SYNPCC7002_A1451
Alternate gene names: 170078060
Gene position: 1524608-1526119 (Clockwise)
Preceding gene: 170078059
Following gene: 170078061
Centisome position: 50.68
GC content: 50.0
Gene sequence:
>1512_bases ATGGTCGTCTTTTCCCCCAAACAATGGCTTAAACTGCTGCGAATCCATTTTCTCTCGGTTCGGGGTCGCGTTTTTTTCTG GTATTTACTGCTGTTATCAGGGTTCCTCGCCATTTCCTTTCCCCTGATGTTGCACTTGGTATTTAGCAACATTAACCAGC GGGTCAGAAATGATCTCAAGGAAGATGTGTATTTGTTTGAGGGTTTACTGAACAATGACCCCCAAGTGAAACAACGGCTT GCCCTCCGAGAAACCGAGATTTTGCCCCTCTCTACCCCGGCGGATTTGATTTCTCTGTTTAATCTGTATCTGGCCCGTCG GGTACCGGAGGACGACACTTTTATCGTTGGCGTGATTGCCGAGGAATTTTATCGCTCTAGCCCCGAAGCTCTACCACCGA CCCTCCAGGCAGATTCTTCTCTTTTGCAACGCTTGGCCCAGGTAAACCGCTGGGAAGAGGGAGTTGATCCGCGTCCCAAT TCGGAAACGGGGGATATTTTGTATGTGGCGCTCCCCATCGAAAATGAGACAGGGGATATTCTGGGGCGCTTTATTGCCGT CCATGCTGTAGCGGGGGAACACAATGAAACTCTCACGTCTTTAAAAATTGTTTTTGCGACGTTGATCGGGGTTTTTTGTT TGTCCATTGCGGTGAGTGCCGTGATTGCAGGGCGGGTTTTAGCACCCCTAACTTTAATTTTGAAAACGGCAACAAGCATT AATGAATCCAACCTGACGCGACGGATTCCCATCACCACCCAGGGGGAATTGGCCAATTTAGCCCAGGCTTTTAACTCGAT GCTAGACCGACTGGAAACGGCCTTTGAAAATCAGCGGCAGTTTCTCAATGATGTGGGTCATGAACTGCGCACGCCGATCA CGATTATTCGGGGGCATCTGGAATTGATGGCGATCGCCAATCTTCCCTTCGAAGAACAAAAAACGGTGGAATTGGTTGTA GATGAACTAGATCGCATGGGCCGACTGGTGCAGGAGTTGATCCTGTTGGCGAAGTTGGAGCGGCCCAATTTTTTGCACTA CGAACCGATTGATATAGAGTCGTTTTTAGAAGAGCTCTACACGAAAATTACGGCTTTAACGTCTAGTCCTCGCCAATGGC AACGGCAGGGAATGGTGACGGGAATTCTCTGGGGCGATCGCCAACGGTTAACCCAAGCGCTAATTAATCTCGCCCAAAAC GCCGTTCAACACACCCAACCCCATGACGAAATTTGCCTAGGGGTCACTCGCACCGGGAAAAATTTACAATTTTGGTTACA AGATAGTGGGCAGGGAATTGCCGCCGCTGACCAAACACGGATTTTTGAACGGTTTGCCCGGGGCCGCCAAGTACGGGGCA CAGAAGGCTCAGGCCTGGGGTTAGCCATCGTTAAGCAGGTGGCGATCGCCCATGGCGGCAGCATTACCGTCGCAAGCGAG TTAAACAAAGGTAGTACATTTACCCTGACGATTCCCTATGACCCAGATTCTGATTATCGAAGACGAACCTAG
Upstream 100 bases:
>100_bases TTTGGGCAAAACAAGCCCTGAGTCTTAATCTCAATGCCGCGACCCAAGTGGCCGGTATTATTGAACGCCCCCTACCCCAA CGCTCCCTATTCCAGCGTTA
Downstream 100 bases:
>100_bases AATCGCTTCCTTCCTCGAAAAGGGGTTTAAGAGCGAAGGCTTTACGGTGACCATCGCCAGCACCGCCAAAGAAGCCCTAG ACTGGGCCTTGCAATATCCC
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MVVFSPKQWLKLLRIHFLSVRGRVFFWYLLLLSGFLAISFPLMLHLVFSNINQRVRNDLKEDVYLFEGLLNNDPQVKQRL ALRETEILPLSTPADLISLFNLYLARRVPEDDTFIVGVIAEEFYRSSPEALPPTLQADSSLLQRLAQVNRWEEGVDPRPN SETGDILYVALPIENETGDILGRFIAVHAVAGEHNETLTSLKIVFATLIGVFCLSIAVSAVIAGRVLAPLTLILKTATSI NESNLTRRIPITTQGELANLAQAFNSMLDRLETAFENQRQFLNDVGHELRTPITIIRGHLELMAIANLPFEEQKTVELVV DELDRMGRLVQELILLAKLERPNFLHYEPIDIESFLEELYTKITALTSSPRQWQRQGMVTGILWGDRQRLTQALINLAQN AVQHTQPHDEICLGVTRTGKNLQFWLQDSGQGIAAADQTRIFERFARGRQVRGTEGSGLGLAIVKQVAIAHGGSITVASE LNKGSTFTLTIPYDPDSDYRRRT
Sequences:
>Translated_503_residues MVVFSPKQWLKLLRIHFLSVRGRVFFWYLLLLSGFLAISFPLMLHLVFSNINQRVRNDLKEDVYLFEGLLNNDPQVKQRL ALRETEILPLSTPADLISLFNLYLARRVPEDDTFIVGVIAEEFYRSSPEALPPTLQADSSLLQRLAQVNRWEEGVDPRPN SETGDILYVALPIENETGDILGRFIAVHAVAGEHNETLTSLKIVFATLIGVFCLSIAVSAVIAGRVLAPLTLILKTATSI NESNLTRRIPITTQGELANLAQAFNSMLDRLETAFENQRQFLNDVGHELRTPITIIRGHLELMAIANLPFEEQKTVELVV DELDRMGRLVQELILLAKLERPNFLHYEPIDIESFLEELYTKITALTSSPRQWQRQGMVTGILWGDRQRLTQALINLAQN AVQHTQPHDEICLGVTRTGKNLQFWLQDSGQGIAAADQTRIFERFARGRQVRGTEGSGLGLAIVKQVAIAHGGSITVASE LNKGSTFTLTIPYDPDSDYRRRT >Mature_503_residues MVVFSPKQWLKLLRIHFLSVRGRVFFWYLLLLSGFLAISFPLMLHLVFSNINQRVRNDLKEDVYLFEGLLNNDPQVKQRL ALRETEILPLSTPADLISLFNLYLARRVPEDDTFIVGVIAEEFYRSSPEALPPTLQADSSLLQRLAQVNRWEEGVDPRPN SETGDILYVALPIENETGDILGRFIAVHAVAGEHNETLTSLKIVFATLIGVFCLSIAVSAVIAGRVLAPLTLILKTATSI NESNLTRRIPITTQGELANLAQAFNSMLDRLETAFENQRQFLNDVGHELRTPITIIRGHLELMAIANLPFEEQKTVELVV DELDRMGRLVQELILLAKLERPNFLHYEPIDIESFLEELYTKITALTSSPRQWQRQGMVTGILWGDRQRLTQALINLAQN AVQHTQPHDEICLGVTRTGKNLQFWLQDSGQGIAAADQTRIFERFARGRQVRGTEGSGLGLAIVKQVAIAHGGSITVASE LNKGSTFTLTIPYDPDSDYRRRT
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=470, Percent_Identity=27.2340425531915, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788393, Length=278, Percent_Identity=29.8561151079137, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1786600, Length=270, Percent_Identity=32.2222222222222, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1787894, Length=304, Percent_Identity=28.6184210526316, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1790436, Length=214, Percent_Identity=33.1775700934579, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI48994928, Length=236, Percent_Identity=33.0508474576271, Blast_Score=102, Evalue=8e-23, Organism=Escherichia coli, GI1788279, Length=290, Percent_Identity=28.6206896551724, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1786912, Length=253, Percent_Identity=27.2727272727273, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI145693157, Length=244, Percent_Identity=31.5573770491803, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1788549, Length=261, Percent_Identity=26.4367816091954, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1790346, Length=279, Percent_Identity=26.8817204301075, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1788713, Length=339, Percent_Identity=25.3687315634218, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1790861, Length=333, Percent_Identity=25.8258258258258, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1789149, Length=347, Percent_Identity=24.4956772334294, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789403, Length=313, Percent_Identity=26.8370607028754, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790551, Length=282, Percent_Identity=28.3687943262411, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI87082128, Length=294, Percent_Identity=22.4489795918367, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87081816, Length=234, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787374, Length=299, Percent_Identity=21.7391304347826, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789808, Length=241, Percent_Identity=24.0663900414938, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 56599; Mature: 56599
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVFSPKQWLKLLRIHFLSVRGRVFFWYLLLLSGFLAISFPLMLHLVFSNINQRVRNDLK CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDVYLFEGLLNNDPQVKQRLALRETEILPLSTPADLISLFNLYLARRVPEDDTFIVGVIA HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHH EEFYRSSPEALPPTLQADSSLLQRLAQVNRWEEGVDPRPNSETGDILYVALPIENETGDI HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHH LGRFIAVHAVAGEHNETLTSLKIVFATLIGVFCLSIAVSAVIAGRVLAPLTLILKTATSI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NESNLTRRIPITTQGELANLAQAFNSMLDRLETAFENQRQFLNDVGHELRTPITIIRGHL CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ELMAIANLPFEEQKTVELVVDELDRMGRLVQELILLAKLERPNFLHYEPIDIESFLEELY HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH TKITALTSSPRQWQRQGMVTGILWGDRQRLTQALINLAQNAVQHTQPHDEICLGVTRTGK HHHHHHCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCC NLQFWLQDSGQGIAAADQTRIFERFARGRQVRGTEGSGLGLAIVKQVAIAHGGSITVASE CEEEEEECCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEC LNKGSTFTLTIPYDPDSDYRRRT CCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MVVFSPKQWLKLLRIHFLSVRGRVFFWYLLLLSGFLAISFPLMLHLVFSNINQRVRNDLK CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EDVYLFEGLLNNDPQVKQRLALRETEILPLSTPADLISLFNLYLARRVPEDDTFIVGVIA HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHH EEFYRSSPEALPPTLQADSSLLQRLAQVNRWEEGVDPRPNSETGDILYVALPIENETGDI HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHH LGRFIAVHAVAGEHNETLTSLKIVFATLIGVFCLSIAVSAVIAGRVLAPLTLILKTATSI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NESNLTRRIPITTQGELANLAQAFNSMLDRLETAFENQRQFLNDVGHELRTPITIIRGHL CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ELMAIANLPFEEQKTVELVVDELDRMGRLVQELILLAKLERPNFLHYEPIDIESFLEELY HHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH TKITALTSSPRQWQRQGMVTGILWGDRQRLTQALINLAQNAVQHTQPHDEICLGVTRTGK HHHHHHCCCHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCC NLQFWLQDSGQGIAAADQTRIFERFARGRQVRGTEGSGLGLAIVKQVAIAHGGSITVASE CEEEEEECCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEC LNKGSTFTLTIPYDPDSDYRRRT CCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]