| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078054
Identifier: 170078054
GI number: 170078054
Start: 1517562
End: 1518863
Strand: Direct
Name: 170078054
Synonym: SYNPCC7002_A1445
Alternate gene names: NA
Gene position: 1517562-1518863 (Clockwise)
Preceding gene: 170078050
Following gene: 170078055
Centisome position: 50.45
GC content: 54.92
Gene sequence:
>1302_bases ATGGAACCCGCCCAACGACAACGGAATGTTCAATGGCGATCGCCCCAGGGGATCTCTAGCCCAACCCCTGTTTCTGGGAA ACGAGCCCCCCGATCTAGGCCGCCAGCTCCTCGCCACCGCATCGTGCTATATTCCCACGACACCATGGGCTTGGGTCACA AACGGCGTAATGTGTTGATTGCGCAGACCCTACAACGATCAGCTTTGCCCCTAGATATTTTGCTCATTAGTGGCATGGGC GATGGCAATGAAGGGCTGGCCCGTGCGGGGATTGATTGTTTAAGTTTGCCAGCCTTGAAAAAAAGCCGGGATGGTTCCTA CAGAGCGCGTCATTTAGCCTTGCCGTTACGGGACATCATTGGGTTGCGATCGCAGCTAATTTTAAAAACTATCCAACAAT TTCAACCGGATGTTTTCATCGTCGATAATGTCCCCAGGGGGGCAGAACGGGAACTAGACCCCAGCCTGGAATACATCCGG AAACAGCCTAAGATGCGCTGTGTTTTGGGGCTAAGGGATGTGTTGGACGACCCGGCAGCGGTGCGGCGGGATTGGCAACG GGCGGACAACGAAACGGCCATTCGTCGCTACTATGATGCGGTGTGGATTTACGGCGATCCCCAGGTTTACGATCTGCGGC GAGAATATGATTTTTCCCCAGAGGTGGTCGCAAAAATGCTGCCCCTCGGTTATTTCAATCAATGCGATCGCCTCCAGTAT TTAGGGCAATCCTGGCAAGAAACCTTAAAAGCGTGGGATTTACCCGCCCGGTTCGTCCTCGGTGCGGTGGGTGGCGGCCA AGATGGGGAAACCCTGGCGATCGCCTTTGCCCAAATTCCCTTCACCGCCGAAAATCCGGGGGTGCTACTCACGGGGCCTT TTATGCCGGAGTCCGTGCGCCAAACCCTAGGGGCGATCGCCCAACATAATCCCCACCTGACGATCCTTCCTTCCTGTCCC GAACCGACGATTCTCATGGCCGCCGCCGAACGGGTGATTGCCATGGGTGGCTACAATACCACCTGTGAAATTCTTTCCTT CCAGAAACCCGCTCTGATTATTCCCCGGATAAAACCCCGCCAGGAACAATGGCTGCGGGCGACCCGTTTAAAAAAATTGG GTCTGGTGGACGTGCTCCATCCCCACCAGGTTAATCCTCAGAATCTAGCGGCTTGGCTCCGTTGTGATCCAAAACCCCCC AAGCGCAGTGCTGGTCTCAATCTCCAGGCCACCGAACAATTGCCCCTCCTTTTAGGTCAAATGCTCAAGACTTCTAGCGG TTTTACTGCCCAAGCTTCCTAG
Upstream 100 bases:
>100_bases TCTTCACCAGGGATTTAGGCAAGCGGGTCAAGATATCCATCATCGTCAAGAATCTGGCGATCAGTGTCGAGGTCAGATCC CAAAGGAGAGGTCTTTGCCC
Downstream 100 bases:
>100_bases TCCATCACCTTATTTCCACTATTTGTTCAATGTGCCATGGCCATTGCCTACGTTGTTAAACGCTATCCCCGCTATTCAGA AACCTTTATCGTCAATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyltransferase Protein; Glycosyltransferase Family; RedA-Like Protein; Glycosyl Transferase; Glycosyl Transferase-Like Protein; Response Regulator Receiver Protein
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MEPAQRQRNVQWRSPQGISSPTPVSGKRAPRSRPPAPRHRIVLYSHDTMGLGHKRRNVLIAQTLQRSALPLDILLISGMG DGNEGLARAGIDCLSLPALKKSRDGSYRARHLALPLRDIIGLRSQLILKTIQQFQPDVFIVDNVPRGAERELDPSLEYIR KQPKMRCVLGLRDVLDDPAAVRRDWQRADNETAIRRYYDAVWIYGDPQVYDLRREYDFSPEVVAKMLPLGYFNQCDRLQY LGQSWQETLKAWDLPARFVLGAVGGGQDGETLAIAFAQIPFTAENPGVLLTGPFMPESVRQTLGAIAQHNPHLTILPSCP EPTILMAAAERVIAMGGYNTTCEILSFQKPALIIPRIKPRQEQWLRATRLKKLGLVDVLHPHQVNPQNLAAWLRCDPKPP KRSAGLNLQATEQLPLLLGQMLKTSSGFTAQAS
Sequences:
>Translated_433_residues MEPAQRQRNVQWRSPQGISSPTPVSGKRAPRSRPPAPRHRIVLYSHDTMGLGHKRRNVLIAQTLQRSALPLDILLISGMG DGNEGLARAGIDCLSLPALKKSRDGSYRARHLALPLRDIIGLRSQLILKTIQQFQPDVFIVDNVPRGAERELDPSLEYIR KQPKMRCVLGLRDVLDDPAAVRRDWQRADNETAIRRYYDAVWIYGDPQVYDLRREYDFSPEVVAKMLPLGYFNQCDRLQY LGQSWQETLKAWDLPARFVLGAVGGGQDGETLAIAFAQIPFTAENPGVLLTGPFMPESVRQTLGAIAQHNPHLTILPSCP EPTILMAAAERVIAMGGYNTTCEILSFQKPALIIPRIKPRQEQWLRATRLKKLGLVDVLHPHQVNPQNLAAWLRCDPKPP KRSAGLNLQATEQLPLLLGQMLKTSSGFTAQAS >Mature_433_residues MEPAQRQRNVQWRSPQGISSPTPVSGKRAPRSRPPAPRHRIVLYSHDTMGLGHKRRNVLIAQTLQRSALPLDILLISGMG DGNEGLARAGIDCLSLPALKKSRDGSYRARHLALPLRDIIGLRSQLILKTIQQFQPDVFIVDNVPRGAERELDPSLEYIR KQPKMRCVLGLRDVLDDPAAVRRDWQRADNETAIRRYYDAVWIYGDPQVYDLRREYDFSPEVVAKMLPLGYFNQCDRLQY LGQSWQETLKAWDLPARFVLGAVGGGQDGETLAIAFAQIPFTAENPGVLLTGPFMPESVRQTLGAIAQHNPHLTILPSCP EPTILMAAAERVIAMGGYNTTCEILSFQKPALIIPRIKPRQEQWLRATRLKKLGLVDVLHPHQVNPQNLAAWLRCDPKPP KRSAGLNLQATEQLPLLLGQMLKTSSGFTAQAS
Specific function: Unknown
COG id: COG4671
COG function: function code R; Predicted glycosyl transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48432; Mature: 48432
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPAQRQRNVQWRSPQGISSPTPVSGKRAPRSRPPAPRHRIVLYSHDTMGLGHKRRNVLI CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHCCCHH AQTLQRSALPLDILLISGMGDGNEGLARAGIDCLSLPALKKSRDGSYRARHLALPLRDII HHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCHHCCCHHHCCCCCCCCHHEECCCHHHHH GLRSQLILKTIQQFQPDVFIVDNVPRGAERELDPSLEYIRKQPKMRCVLGLRDVLDDPAA HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHH VRRDWQRADNETAIRRYYDAVWIYGDPQVYDLRREYDFSPEVVAKMLPLGYFNQCDRLQY HHHHHHHCCCHHHHHHHHCEEEEECCCEEEEHHHHCCCCHHHHHHHHCCCHHHHHHHHHH LGQSWQETLKAWDLPARFVLGAVGGGQDGETLAIAFAQIPFTAENPGVLLTGPFMPESVR HHHHHHHHHHHHCCCHHHHEECCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCHHHH QTLGAIAQHNPHLTILPSCPEPTILMAAAERVIAMGGYNTTCEILSFQKPALIIPRIKPR HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCCEEEECCCCCH QEQWLRATRLKKLGLVDVLHPHQVNPQNLAAWLRCDPKPPKRSAGLNLQATEQLPLLLGQ HHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCEEEHHHHHHHHHH MLKTSSGFTAQAS HHHCCCCCEECCC >Mature Secondary Structure MEPAQRQRNVQWRSPQGISSPTPVSGKRAPRSRPPAPRHRIVLYSHDTMGLGHKRRNVLI CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHCCCHH AQTLQRSALPLDILLISGMGDGNEGLARAGIDCLSLPALKKSRDGSYRARHLALPLRDII HHHHHHCCCCEEEEEEECCCCCCCCHHHHCCCHHCCCHHHCCCCCCCCHHEECCCHHHHH GLRSQLILKTIQQFQPDVFIVDNVPRGAERELDPSLEYIRKQPKMRCVLGLRDVLDDPAA HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHH VRRDWQRADNETAIRRYYDAVWIYGDPQVYDLRREYDFSPEVVAKMLPLGYFNQCDRLQY HHHHHHHCCCHHHHHHHHCEEEEECCCEEEEHHHHCCCCHHHHHHHHCCCHHHHHHHHHH LGQSWQETLKAWDLPARFVLGAVGGGQDGETLAIAFAQIPFTAENPGVLLTGPFMPESVR HHHHHHHHHHHHCCCHHHHEECCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCHHHH QTLGAIAQHNPHLTILPSCPEPTILMAAAERVIAMGGYNTTCEILSFQKPALIIPRIKPR HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHEECCCCCEEEEEECCCCEEEECCCCCH QEQWLRATRLKKLGLVDVLHPHQVNPQNLAAWLRCDPKPPKRSAGLNLQATEQLPLLLGQ HHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCEEEHHHHHHHHHH MLKTSSGFTAQAS HHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA