| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is prx
Identifier: 170077997
GI number: 170077997
Start: 1447490
End: 1448071
Strand: Direct
Name: prx
Synonym: SYNPCC7002_A1383
Alternate gene names: NA
Gene position: 1447490-1448071 (Clockwise)
Preceding gene: 170077996
Following gene: 170078000
Centisome position: 48.12
GC content: 51.89
Gene sequence:
>582_bases ATGGCTCGCACTGAATCCACCATGCTTCCCTTGGGTGCTCCGGCTCCTGATTTTGCCCTACCGGATGTCACCACCGGAAA AACCGTTAGCCTTGGAGATTTCCGGGGGAAAGCGGGTTTGCTCGTGATTTTTATGTGTCGTCACTGTCCGTTTGTGATCC ATGTCCAGGATGAGCTAGCCCGGTTGGGAGTAGATTTCGTCCCCCAGGATCTAGGCATTGTCGCCATTAGTGCCAATGAT GCAGAGAATTATCCGGATGATGGCCCAGAAAAGCTCAAGGAAATGGCGGCAGCACTCCAATTAAATTTTCCGATTCTCTA TGATGAGTCCCAGGCGATCGCCAAAAGTTATCAAGCGGCCTGTACCCCTGATTTTTTCCTTTTCGACCAGGACTTAAAGC TGGTCTATCGGGGCCAATTGGACGACGCCCGCCCCGGTAATGACAAGCCCGTGACGGGAGCTGATCTTCGCCAGGCGATC GCCGCTGTTTTGGCAAAAGAAACCCCTGATCCGAACCAAAAGCCTAGCCTTGGTTGCAATATCAAATGGAAACCAGGCAA TGCCCCCAGTTATTTTGGCTAA
Upstream 100 bases:
>100_bases ATCTTCATCTCACTTGGGTTTATGAAGGCGATCGCTAAATTGATTTTGATGGTTTGCGTCAGTCCCAGTAACTTACACAC AATTATTGAGGTGATTTTTT
Downstream 100 bases:
>100_bases ACCACAGGGGACGACTTGACCGTCAGCCATAGCAAAATGACGAGGGCCAGGACAAGCAGTTTTACTAAAATGTACAGGGT GCCATCTGGAAATAAATAGG
Product: peroxiredoxin
Products: NA
Alternate protein names: Redoxin Domain Protein; Thioredoxin Family Protein; Redoxin; Redoxin Superfamily; Thiol-Disulfide Isomerase/Thioredoxin; Thioredoxin; Thiol-Disulfide Isomerase Or Thioredoxin; Peroxiredoxin; Thiol-Disulfide Isomerase; Antioxidant AhpC/TSA Family; Alkyl Hydroperoxide Reductase; Thioredoxin Domain-Containing Protein; Anti-Oxidant AhpCTSA Family Protein; Thiol-Disulfide Isomerase Thioredoxin Family; Peroxiredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxin; AhpC/TSA Family Protein; Thiol-Disulfide Isomerase-Like Protein; Thiol-Disulfide Isomerase And Thioredoxins
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MARTESTMLPLGAPAPDFALPDVTTGKTVSLGDFRGKAGLLVIFMCRHCPFVIHVQDELARLGVDFVPQDLGIVAISAND AENYPDDGPEKLKEMAAALQLNFPILYDESQAIAKSYQAACTPDFFLFDQDLKLVYRGQLDDARPGNDKPVTGADLRQAI AAVLAKETPDPNQKPSLGCNIKWKPGNAPSYFG
Sequences:
>Translated_193_residues MARTESTMLPLGAPAPDFALPDVTTGKTVSLGDFRGKAGLLVIFMCRHCPFVIHVQDELARLGVDFVPQDLGIVAISAND AENYPDDGPEKLKEMAAALQLNFPILYDESQAIAKSYQAACTPDFFLFDQDLKLVYRGQLDDARPGNDKPVTGADLRQAI AAVLAKETPDPNQKPSLGCNIKWKPGNAPSYFG >Mature_192_residues ARTESTMLPLGAPAPDFALPDVTTGKTVSLGDFRGKAGLLVIFMCRHCPFVIHVQDELARLGVDFVPQDLGIVAISANDA ENYPDDGPEKLKEMAAALQLNFPILYDESQAIAKSYQAACTPDFFLFDQDLKLVYRGQLDDARPGNDKPVTGADLRQAIA AVLAKETPDPNQKPSLGCNIKWKPGNAPSYFG
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20896; Mature: 20765
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTESTMLPLGAPAPDFALPDVTTGKTVSLGDFRGKAGLLVIFMCRHCPFVIHVQDELA CCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEHHHCCEEEEEHHHHH RLGVDFVPQDLGIVAISANDAENYPDDGPEKLKEMAAALQLNFPILYDESQAIAKSYQAA HCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHC CTPDFFLFDQDLKLVYRGQLDDARPGNDKPVTGADLRQAIAAVLAKETPDPNQKPSLGCN CCCCEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE IKWKPGNAPSYFG EEECCCCCCCCCC >Mature Secondary Structure ARTESTMLPLGAPAPDFALPDVTTGKTVSLGDFRGKAGLLVIFMCRHCPFVIHVQDELA CCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEHHHCCEEEEEHHHHH RLGVDFVPQDLGIVAISANDAENYPDDGPEKLKEMAAALQLNFPILYDESQAIAKSYQAA HCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHC CTPDFFLFDQDLKLVYRGQLDDARPGNDKPVTGADLRQAIAAVLAKETPDPNQKPSLGCN CCCCEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE IKWKPGNAPSYFG EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA