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The map label for this gene is 170077938

Identifier: 170077938

GI number: 170077938

Start: 1378298

End: 1378678

Strand: Direct

Name: 170077938

Synonym: SYNPCC7002_A1323

Alternate gene names: NA

Gene position: 1378298-1378678 (Clockwise)

Preceding gene: 170077937

Following gene: 170077939

Centisome position: 45.82

GC content: 35.96

Gene sequence:

>381_bases
GTGAATTGCCAGCAGCAAAACTTAATGAGTAAGGCAACTGAAAGTTTAGAAGCAGCCAAATTATTACGAGACAATCAATA
CTTTGATTATTCGGTTTCGCGAGCTTACTACACAATGTTTTACTTAGCCGAAGCTTTTTTAGAAGGAGAAGCAAAAACTT
TTTCGAGTCATACTGCTGTAATTTCTGCTTTTGGTCGAGATTTTGCTAAATTAGGTAAAGTGCCACGAGAATTTCATCGT
TTTCTTATTGATGCCCAGTCTCTTCGACAGACAGGTGACTATGGAAAGTTCCAGGCAATTTCTGCATACCAAGCGAATCA
ACAAATTGAAAATGCTACAAAATTTCTTACTTTTGCTAGGGATTATTTCAAAGAATTTTAA

Upstream 100 bases:

>100_bases
AATATGACATTTTAATCAACCGCATTTTTATGGACAATGAATATTTTGAAAAACATCGGAGTGCTCTAATTCGAAATATT
CAGCGAGAAGGTATTTATTT

Downstream 100 bases:

>100_bases
GAATTATGTTGCCTAGAAAGTGATCGCCAAAGAGACTTTTACACTGCAACTATCGTCTTTTAACAAAAGTGAGTTCCGTT
CGCTGTGAAACCCCATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MNCQQQNLMSKATESLEAAKLLRDNQYFDYSVSRAYYTMFYLAEAFLEGEAKTFSSHTAVISAFGRDFAKLGKVPREFHR
FLIDAQSLRQTGDYGKFQAISAYQANQQIENATKFLTFARDYFKEF

Sequences:

>Translated_126_residues
MNCQQQNLMSKATESLEAAKLLRDNQYFDYSVSRAYYTMFYLAEAFLEGEAKTFSSHTAVISAFGRDFAKLGKVPREFHR
FLIDAQSLRQTGDYGKFQAISAYQANQQIENATKFLTFARDYFKEF
>Mature_126_residues
MNCQQQNLMSKATESLEAAKLLRDNQYFDYSVSRAYYTMFYLAEAFLEGEAKTFSSHTAVISAFGRDFAKLGKVPREFHR
FLIDAQSLRQTGDYGKFQAISAYQANQQIENATKFLTFARDYFKEF

Specific function: Unknown

COG id: COG1895

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0332 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007842 [H]

Pfam domain/function: PF05168 HEPN [H]

EC number: NA

Molecular weight: Translated: 14595; Mature: 14595

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCQQQNLMSKATESLEAAKLLRDNQYFDYSVSRAYYTMFYLAEAFLEGEAKTFSSHTAV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ISAFGRDFAKLGKVPREFHRFLIDAQSLRQTGDYGKFQAISAYQANQQIENATKFLTFAR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DYFKEF
HHHHHC
>Mature Secondary Structure
MNCQQQNLMSKATESLEAAKLLRDNQYFDYSVSRAYYTMFYLAEAFLEGEAKTFSSHTAV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ISAFGRDFAKLGKVPREFHRFLIDAQSLRQTGDYGKFQAISAYQANQQIENATKFLTFAR
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DYFKEF
HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]