| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is ilvC
Identifier: 170077893
GI number: 170077893
Start: 1325731
End: 1326726
Strand: Direct
Name: ilvC
Synonym: SYNPCC7002_A1278
Alternate gene names: 170077893
Gene position: 1325731-1326726 (Clockwise)
Preceding gene: 170077891
Following gene: 170077895
Centisome position: 44.07
GC content: 50.3
Gene sequence:
>996_bases ATGGCTCGCATGTATTATGATGCGGACGCAAACTTAGATCTGTTAAACGGCAAAACCGTTGCCATCATCGGCTATGGTTC CCAGGGCCATGCCCATGCCCTCAACCTCAAAGACAGTGGGATTAACGTCGTTATCGGCCTATATGCCGGAAGTAAGTCCA CAGCCAAAGCCGAAGCAGAAGGTCTAAAGGTTTTACCTGTTGCGGAAGCAGCAAAAGTGGCGGACTGGATCATGATTTTG TTACCCGACGATGTCCAAAAATCTGTCTACACCAAAGATATTCTCCCCAACCTCCAAGCGGGCAATGTACTTTCCTTTGC TCACGGCTTCAATATCAACTTCGGCCAAATCGTTCCCCCCGCTGATGTAGACGTTGTAATGGTTGCCCCTAAAGGCCCTG GTCACCTCGTGCGTCGTACCTATGAACAAGGTCAAGGGGTGCCCGCATTATTCGCAGTTTACCAAGACGCCACAGGTCAA GCCCGTGATTTGGCGATGGCCTATGCGAAAGGCATCGGCGGTACTCGCGGTGGCATCCTTGAAACCACGTTCCGAGAAGA AACGGAGACTGATCTATTCGGTGAACAGGCAGTTCTCTGTGGTGGTCTGAGTGCTCTGATTAAAGCTGGTTTTGAAACCC TCGTCGAAGCGGGTTACCAGCCGGAGTTGGCTTACTTTGAGTGTCTCCATGAAGTGAAGCTCATTGTTGACCTCGTTGTG GAAGGTGGTCTGGCGAAAATGCGGGATAGCATTTCTACCACCGCTGAGTATGGTGATTATGTCAGTGGGCCACGGGTGAT CACTGCTGAAACCAAAGCCGCAATGAAGGAAATTCTGACCGAAATCCAAACGGGTGAGTTTGCACGAAATTTCATCCTCG AAAATCAGTCGGGTCAAGCGCAATTTACGGCTATTCGTCGCCGTGAAGCAGAACATCCCATTGAAGTTGTGGGTAAGGAT CTGCGGGCAATGTTTAGCTGGTTGAAGGAAAGCTAA
Upstream 100 bases:
>100_bases CAGCAAAAGTTCAGTTGACAACAATCTCCTATAATACGAAGTCTGCAGTATGCATTAACACATATTCTTAACTTTGTAAT TTCCGTCGGAGAATTGTCCT
Downstream 100 bases:
>100_bases TCGAGAAATTAGATTGATTTAATATTTAATAACAATATTAAGTTAAACCGATTAGGTGAGAGTCAGTGATTCTCACCTTT TTTTTAACTGGGCGGTTTCA
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MARMYYDADANLDLLNGKTVAIIGYGSQGHAHALNLKDSGINVVIGLYAGSKSTAKAEAEGLKVLPVAEAAKVADWIMIL LPDDVQKSVYTKDILPNLQAGNVLSFAHGFNINFGQIVPPADVDVVMVAPKGPGHLVRRTYEQGQGVPALFAVYQDATGQ ARDLAMAYAKGIGGTRGGILETTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLVV EGGLAKMRDSISTTAEYGDYVSGPRVITAETKAAMKEILTEIQTGEFARNFILENQSGQAQFTAIRRREAEHPIEVVGKD LRAMFSWLKES
Sequences:
>Translated_331_residues MARMYYDADANLDLLNGKTVAIIGYGSQGHAHALNLKDSGINVVIGLYAGSKSTAKAEAEGLKVLPVAEAAKVADWIMIL LPDDVQKSVYTKDILPNLQAGNVLSFAHGFNINFGQIVPPADVDVVMVAPKGPGHLVRRTYEQGQGVPALFAVYQDATGQ ARDLAMAYAKGIGGTRGGILETTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLVV EGGLAKMRDSISTTAEYGDYVSGPRVITAETKAAMKEILTEIQTGEFARNFILENQSGQAQFTAIRRREAEHPIEVVGKD LRAMFSWLKES >Mature_330_residues ARMYYDADANLDLLNGKTVAIIGYGSQGHAHALNLKDSGINVVIGLYAGSKSTAKAEAEGLKVLPVAEAAKVADWIMILL PDDVQKSVYTKDILPNLQAGNVLSFAHGFNINFGQIVPPADVDVVMVAPKGPGHLVRRTYEQGQGVPALFAVYQDATGQA RDLAMAYAKGIGGTRGGILETTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLVVE GGLAKMRDSISTTAEYGDYVSGPRVITAETKAAMKEILTEIQTGEFARNFILENQSGQAQFTAIRRREAEHPIEVVGKDL RAMFSWLKES
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family
Homologues:
Organism=Escherichia coli, GI1790210, Length=292, Percent_Identity=35.958904109589, Blast_Score=142, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6323387, Length=327, Percent_Identity=33.6391437308869, Blast_Score=151, Evalue=1e-37,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVC_SYNP2 (B1XL20)
Other databases:
- EMBL: CP000951 - RefSeq: YP_001734531.1 - ProteinModelPortal: B1XL20 - SMR: B1XL20 - GeneID: 6057424 - GenomeReviews: CP000951_GR - KEGG: syp:SYNPCC7002_A1278 - HOGENOM: HBG286525 - OMA: MAYAKGI - HAMAP: MF_00435 - InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 - Gene3D: G3DSA:1.10.1040.10 - PANTHER: PTHR21371 - TIGRFAMs: TIGR00465
Pfam domain/function: PF01450 IlvC; PF07991 IlvN; SSF48179 6DGDH_C_like
EC number: =1.1.1.86
Molecular weight: Translated: 35716; Mature: 35585
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: ACT_SITE 108-108
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMYYDADANLDLLNGKTVAIIGYGSQGHAHALNLKDSGINVVIGLYAGSKSTAKAEAE CCEEEECCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHC GLKVLPVAEAAKVADWIMILLPDDVQKSVYTKDILPNLQAGNVLSFAHGFNINFGQIVPP CEEEEEHHHHHHHHCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCC ADVDVVMVAPKGPGHLVRRTYEQGQGVPALFAVYQDATGQARDLAMAYAKGIGGTRGGIL CCCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEE ETTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLVV EEHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGLAKMRDSISTTAEYGDYVSGPRVITAETKAAMKEILTEIQTGEFARNFILENQSGQA CCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHEECCCCCH QFTAIRRREAEHPIEVVGKDLRAMFSWLKES HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARMYYDADANLDLLNGKTVAIIGYGSQGHAHALNLKDSGINVVIGLYAGSKSTAKAEAE CEEEECCCCCEEEECCCEEEEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCCHHHHC GLKVLPVAEAAKVADWIMILLPDDVQKSVYTKDILPNLQAGNVLSFAHGFNINFGQIVPP CEEEEEHHHHHHHHCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCC ADVDVVMVAPKGPGHLVRRTYEQGQGVPALFAVYQDATGQARDLAMAYAKGIGGTRGGIL CCCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEE ETTFREETETDLFGEQAVLCGGLSALIKAGFETLVEAGYQPELAYFECLHEVKLIVDLVV EEHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH EGGLAKMRDSISTTAEYGDYVSGPRVITAETKAAMKEILTEIQTGEFARNFILENQSGQA CCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHEECCCCCH QFTAIRRREAEHPIEVVGKDLRAMFSWLKES HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA