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The map label for this gene is 170077852

Identifier: 170077852

GI number: 170077852

Start: 1278242

End: 1279759

Strand: Direct

Name: 170077852

Synonym: SYNPCC7002_A1236

Alternate gene names: NA

Gene position: 1278242-1279759 (Clockwise)

Preceding gene: 170077849

Following gene: 170077853

Centisome position: 42.49

GC content: 55.14

Gene sequence:

>1518_bases
ATGGAAGCACAGGTACACCAAATCCTGGTGGCGATCGCCCGTGAGCAAGATATTAGCCCCTGGCCCCACCATTTAACCCT
GGCCCGGTTGGTGGCGCGGGGATTACGTTTAGGTCGCTCTGCTCTGATTCAAACCAGAACCGGCATCGAAGACTATGCCC
TCAGCTATCTGACCCCTGCCCTCTTAACCTCAGAGCCTGTCACCATCGTCGTCCCCCAGCTATTGTTGGCTTGGCTCCAA
GCGGAGGAAATCCCGCGACTGCAACGCTTACTGGCAACCGAGCGCCCCATTGTCACCCTTGAATCTGGAAGTCAACCCCA
CCCCAGCGCCATTACGCTTTTAACCCCTCCCCAATGGTTCGGAAGAATGACTGGCGATCGCCCCCCGACCCCTGTAACCA
CAATTCTTAATCCTGTCGATGAGCTATGGCAGTGGGCCCAAGATTTTTACCGTTGCCAACTACAACTTGCCGATTGGGAA
ATGCTCAAGCAACAAAACCCCGGCCAGCAGGATTTTATTCAGAGCCAGTACGACCAACTAAAAGCGCAACTACTGCGGCG
ATCGCCGAATCCCTACCATTGCTATCCCCTCGACCCAGACAATCAACGCCGTTTGGCCACCTGTTTTCAACTCCCCCACC
TCCCCGCAGCTTGGCGTACCTTTGCGGCTACCTGGCAACACCGTCACCAGTCACCTCTCTGCTGGGCGCACCTCCACCAA
CGGGACGGCCGATTTTCTCTCCAAGTAGCTCCCCAGACCCTTAACCAAAGCCTTGCACCCCTCTGGCAACGGCAGCCGAC
TTTATTGATTGGAAGCTTTCTCGAACCCCAACGAGAAGCCCCCAGCTTTTGTACACAAATTGGCCTCAACCCAGACCAGC
TTACTTGCGTAGACTTTGCGCCCCCCCGTCAACAGGATCAAGTGCGCGTTTATCTGCCAGAACAGCGCCTTCCCTTACCC
AATACCCCAGAATTCCAAGGGGAACTATTGCACCAACTGCGTCATCTAATTCGCCGCCACCCCCACCAGAAGCGTCCCAT
TGTTTTATTGATTAACGACGTGCCCCTCCAGGCACAGATGGGGGCGGCCCTTGCTGCTGAGTTTGGGTCGCGGGTCAAGG
TAGAAACAGCAAATCCCCAGGCCGATAGCATTTTGATCTGTGGTTGGGCTTTTTGGCGACGGCTTACGGATCCCTTGTTC
TATGGTCAATCCGTGGGCTTCCCGTTACCTCAACTAATGGCGATCGCCACCCTCCCTCTCCCGTCCCTAGAAAATCCCCT
GGTGGCAGCCCGCGTCGCCCAATACAAACAAAAACGCCAAGATTGGTTTCGCCTGTACCTACTCCCCACAGCTCTCCAGG
AAATGCAACGGGCTACCTATCCCCTCCACCAAGAGCAAAGTGTGATCGCCATTCTCGACAACCGCATCAACCACCGCGCC
TACGGTCAACAAATCCTTGATGCCCTCCAGCCCTGTTCTGTGTGTAATTATCTTGAACCCAACTGGCTAAGAAATTAA

Upstream 100 bases:

>100_bases
GCAATAGGGTTCTGATAGGCTAGAAAGCGTTTTTGCGGGGGGATCAATTCTTGCTTAGGAAATTCTGGGTTGTTGTGTTA
ATGGGAAAAGTGACGCCATG

Downstream 100 bases:

>100_bases
TTTTTGAAGGCTCAAGCAAAAGTCAATGCTTTTGTAACAATTTGCAATATTTCGTAAACTTATGTTAAGATTGTCAATGT
AGACAAACAAAACAGGCAAT

Product: Rad3-related DNA helicase

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase DinG; Carboxyl-Terminal Protease; Rad3-Like DNA Helicase-Like Protein; DNA Helicase; Rad3-Related DNA Helicases

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MEAQVHQILVAIAREQDISPWPHHLTLARLVARGLRLGRSALIQTRTGIEDYALSYLTPALLTSEPVTIVVPQLLLAWLQ
AEEIPRLQRLLATERPIVTLESGSQPHPSAITLLTPPQWFGRMTGDRPPTPVTTILNPVDELWQWAQDFYRCQLQLADWE
MLKQQNPGQQDFIQSQYDQLKAQLLRRSPNPYHCYPLDPDNQRRLATCFQLPHLPAAWRTFAATWQHRHQSPLCWAHLHQ
RDGRFSLQVAPQTLNQSLAPLWQRQPTLLIGSFLEPQREAPSFCTQIGLNPDQLTCVDFAPPRQQDQVRVYLPEQRLPLP
NTPEFQGELLHQLRHLIRRHPHQKRPIVLLINDVPLQAQMGAALAAEFGSRVKVETANPQADSILICGWAFWRRLTDPLF
YGQSVGFPLPQLMAIATLPLPSLENPLVAARVAQYKQKRQDWFRLYLLPTALQEMQRATYPLHQEQSVIAILDNRINHRA
YGQQILDALQPCSVCNYLEPNWLRN

Sequences:

>Translated_505_residues
MEAQVHQILVAIAREQDISPWPHHLTLARLVARGLRLGRSALIQTRTGIEDYALSYLTPALLTSEPVTIVVPQLLLAWLQ
AEEIPRLQRLLATERPIVTLESGSQPHPSAITLLTPPQWFGRMTGDRPPTPVTTILNPVDELWQWAQDFYRCQLQLADWE
MLKQQNPGQQDFIQSQYDQLKAQLLRRSPNPYHCYPLDPDNQRRLATCFQLPHLPAAWRTFAATWQHRHQSPLCWAHLHQ
RDGRFSLQVAPQTLNQSLAPLWQRQPTLLIGSFLEPQREAPSFCTQIGLNPDQLTCVDFAPPRQQDQVRVYLPEQRLPLP
NTPEFQGELLHQLRHLIRRHPHQKRPIVLLINDVPLQAQMGAALAAEFGSRVKVETANPQADSILICGWAFWRRLTDPLF
YGQSVGFPLPQLMAIATLPLPSLENPLVAARVAQYKQKRQDWFRLYLLPTALQEMQRATYPLHQEQSVIAILDNRINHRA
YGQQILDALQPCSVCNYLEPNWLRN
>Mature_505_residues
MEAQVHQILVAIAREQDISPWPHHLTLARLVARGLRLGRSALIQTRTGIEDYALSYLTPALLTSEPVTIVVPQLLLAWLQ
AEEIPRLQRLLATERPIVTLESGSQPHPSAITLLTPPQWFGRMTGDRPPTPVTTILNPVDELWQWAQDFYRCQLQLADWE
MLKQQNPGQQDFIQSQYDQLKAQLLRRSPNPYHCYPLDPDNQRRLATCFQLPHLPAAWRTFAATWQHRHQSPLCWAHLHQ
RDGRFSLQVAPQTLNQSLAPLWQRQPTLLIGSFLEPQREAPSFCTQIGLNPDQLTCVDFAPPRQQDQVRVYLPEQRLPLP
NTPEFQGELLHQLRHLIRRHPHQKRPIVLLINDVPLQAQMGAALAAEFGSRVKVETANPQADSILICGWAFWRRLTDPLF
YGQSVGFPLPQLMAIATLPLPSLENPLVAARVAQYKQKRQDWFRLYLLPTALQEMQRATYPLHQEQSVIAILDNRINHRA
YGQQILDALQPCSVCNYLEPNWLRN

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58039; Mature: 58039

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAQVHQILVAIAREQDISPWPHHLTLARLVARGLRLGRSALIQTRTGIEDYALSYLTPA
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LLTSEPVTIVVPQLLLAWLQAEEIPRLQRLLATERPIVTLESGSQPHPSAITLLTPPQWF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCHHHH
GRMTGDRPPTPVTTILNPVDELWQWAQDFYRCQLQLADWEMLKQQNPGQQDFIQSQYDQL
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KAQLLRRSPNPYHCYPLDPDNQRRLATCFQLPHLPAAWRTFAATWQHRHQSPLCWAHLHQ
HHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHC
RDGRFSLQVAPQTLNQSLAPLWQRQPTLLIGSFLEPQREAPSFCTQIGLNPDQLTCVDFA
CCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECC
PPRQQDQVRVYLPEQRLPLPNTPEFQGELLHQLRHLIRRHPHQKRPIVLLINDVPLQAQM
CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH
GAALAAEFGSRVKVETANPQADSILICGWAFWRRLTDPLFYGQSVGFPLPQLMAIATLPL
HHHHHHHCCCEEEEEECCCCCCEEEEEHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCC
PSLENPLVAARVAQYKQKRQDWFRLYLLPTALQEMQRATYPLHQEQSVIAILDNRINHRA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
YGQQILDALQPCSVCNYLEPNWLRN
HHHHHHHHHCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEAQVHQILVAIAREQDISPWPHHLTLARLVARGLRLGRSALIQTRTGIEDYALSYLTPA
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LLTSEPVTIVVPQLLLAWLQAEEIPRLQRLLATERPIVTLESGSQPHPSAITLLTPPQWF
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCHHHH
GRMTGDRPPTPVTTILNPVDELWQWAQDFYRCQLQLADWEMLKQQNPGQQDFIQSQYDQL
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KAQLLRRSPNPYHCYPLDPDNQRRLATCFQLPHLPAAWRTFAATWQHRHQSPLCWAHLHQ
HHHHHHCCCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHC
RDGRFSLQVAPQTLNQSLAPLWQRQPTLLIGSFLEPQREAPSFCTQIGLNPDQLTCVDFA
CCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCEEEEECC
PPRQQDQVRVYLPEQRLPLPNTPEFQGELLHQLRHLIRRHPHQKRPIVLLINDVPLQAQM
CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH
GAALAAEFGSRVKVETANPQADSILICGWAFWRRLTDPLFYGQSVGFPLPQLMAIATLPL
HHHHHHHCCCEEEEEECCCCCCEEEEEHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCC
PSLENPLVAARVAQYKQKRQDWFRLYLLPTALQEMQRATYPLHQEQSVIAILDNRINHRA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
YGQQILDALQPCSVCNYLEPNWLRN
HHHHHHHHHCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA