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The map label for this gene is ynfA [C]

Identifier: 170077850

GI number: 170077850

Start: 1277210

End: 1277545

Strand: Reverse

Name: ynfA [C]

Synonym: SYNPCC7002_A1234

Alternate gene names: 170077850

Gene position: 1277545-1277210 (Counterclockwise)

Preceding gene: 170077851

Following gene: 170077848

Centisome position: 42.47

GC content: 51.79

Gene sequence:

>336_bases
ATGACCAGCGTTATTTTCAAATCTTTGCTGTATTTTGTGCTGGCGGGGCTGTTTGAAATTGGTGGCGGTTATCTCGTCTG
GCTCTGGCTTAGGGAAGGAAAAAGTTTACCCGTCGCCCTTTTGGGCTGGCTACTGCTGATGATTTACGGCGTGATTCCGA
CCCTGCAACCGGCTCACTTTGGTCGGGTCTATGCGGCTTACAGCGGTATTTTTATTGTCTTGTCGTTGCTGTGGGGCTGG
CGTATCGACCAAGTTCGTCCCGATAACTACGATTGGCTGGGCTGTGGTTTGGCGATCGCCGGGGTTTTGGTCATGATGTA
TGCTCCCCGCAGTTAA

Upstream 100 bases:

>100_bases
GTTGCTTTGTGCCAACCCTGCCCAACGATCCCTGGGACGTGCCCTTAGACTATGTTTGTACAGAAAAACGACTGATTAAA
ATTGCCCAGGAGCTTTCCCA

Downstream 100 bases:

>100_bases
GCGCCGTTAGGATTTTTCACCCATGACTTTTGCGAACCTATTAAAAAGCCCCCCAACCAGCTAGGGATTGAGGAGCCAGG
TGCTAGGCGATCGCCAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTSVIFKSLLYFVLAGLFEIGGGYLVWLWLREGKSLPVALLGWLLLMIYGVIPTLQPAHFGRVYAAYSGIFIVLSLLWGW
RIDQVRPDNYDWLGCGLAIAGVLVMMYAPRS

Sequences:

>Translated_111_residues
MTSVIFKSLLYFVLAGLFEIGGGYLVWLWLREGKSLPVALLGWLLLMIYGVIPTLQPAHFGRVYAAYSGIFIVLSLLWGW
RIDQVRPDNYDWLGCGLAIAGVLVMMYAPRS
>Mature_110_residues
TSVIFKSLLYFVLAGLFEIGGGYLVWLWLREGKSLPVALLGWLLLMIYGVIPTLQPAHFGRVYAAYSGIFIVLSLLWGWR
IDQVRPDNYDWLGCGLAIAGVLVMMYAPRS

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=102, Percent_Identity=37.2549019607843, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 12470; Mature: 12339

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVIFKSLLYFVLAGLFEIGGGYLVWLWLREGKSLPVALLGWLLLMIYGVIPTLQPAHF
CHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
GRVYAAYSGIFIVLSLLWGWRIDQVRPDNYDWLGCGLAIAGVLVMMYAPRS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSVIFKSLLYFVLAGLFEIGGGYLVWLWLREGKSLPVALLGWLLLMIYGVIPTLQPAHF
HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
GRVYAAYSGIFIVLSLLWGWRIDQVRPDNYDWLGCGLAIAGVLVMMYAPRS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA