| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077847
Identifier: 170077847
GI number: 170077847
Start: 1274225
End: 1275391
Strand: Direct
Name: 170077847
Synonym: SYNPCC7002_A1231
Alternate gene names: NA
Gene position: 1274225-1275391 (Clockwise)
Preceding gene: 170077846
Following gene: 170077849
Centisome position: 42.36
GC content: 50.73
Gene sequence:
>1167_bases TTGTTATTTTCCGAGTTTTGGCGGATTGTAGTGGCGAATTATTTCACTATACTGAAGTGGTGTGCCCGTCTTATTGCCAC TATGGATGTCCCAACCAAAAACCAAAGTTCGATACCATCATCTGTCAAGATCTGCCTTAGCAGTGCCTTATTTTTGAGCC TTCCCCTCGCCATTTCCGTGAAAGCCGAAGTTTACCAAGGGATTGATTTTCCCCAGGGGGCCAGCTCCTTTGCAGATCGA GTCGTGAGCTTGGAATACAACGAGGCCACCAATGTCAGTGGTGAATATCGTGACAGCTCCCGCGCCCTAGGCATTCCAGA TGGTAACCACGTATCCCTCGGTAATGCCTCAGATGAAATGAATTCTTCTGCGTTGATTGTGGAGTTTGTCAATAATCGCC TGGTGGACGTGCCAGGGCCAGATCTTTACATTTTTGAAGTGGGGCCAGCGGTAGAGGCCACCAACGTGGCGATTTCTACA GATGGACAGCAATGGTACGAGTTGGGGCGTATTCAAGGCGCTACCCGTTCTGTGGATTTAGCGAGGTTTAATGATTTGCC CCCTGGTGCCCAATATCGCTTCGTGCGCTTACGTGATTATCCCGACTGGCGAACGAGTGGTAGTCCCTATGGTGGCCCAG ATATTGATGCCATTGGCGCCATTGGATCTGTGGCGGCATCGCCGGAACCGGTGCGGGTGCCCCCTGGTAATCGGCCTGAT TTGTTTAACCCTGAGCCTGGGGATACGCTTCAACTGGGTAACAATGCCCAAGCTTGTCGCAACGGCAATGTGACCTTTCA AGCCATTGGCAATCCCCAAGTGTCATTGCGCTTTGAGCCAGCCCAAGGCTTTGTGACTGTCCCCTACATTGGCGTTATTA ACCATCAGCAGCGGGGAGAGGTGGCCCGATTTGAATATTCGATTTCGGTGGGCTATCCCAGAGCTAATCTCATTTTGCAA AACAGTACAACGCCGACAGATCCCCCTAGCTTTCCCATTTACTTTTTCGATGGTCGCTTAATGCCGACCTATGGGGACGT GAAATCAGAGTATGCGGTAATTTCAGGGTTTGGCTCCTATGATCATTACTTTAATGTGGAGAGGGGTTCCCGCACGGGAG GCGGAGAAATTGGCGATGTGATGTGGCGTCAACAATGTTCAGGTTAG
Upstream 100 bases:
>100_bases ATTTCCAGTCCCCAGCGATTAATACTGTTTAATTGAAATTTGTCTCCTTTGACCACAAAAAATATTTCAACAACAGTAAA AATACCGCTAACTATTACTA
Downstream 100 bases:
>100_bases GGCAAGTCGCTAAAGTCGAGGCAGGGGGAGGCGATCGCCTTGGGGATTATCTAATAACAAAATGTGGCGATCGCCATCAA TTTTTAGCCAGCCTTGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: OmpA/MotB
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MLFSEFWRIVVANYFTILKWCARLIATMDVPTKNQSSIPSSVKICLSSALFLSLPLAISVKAEVYQGIDFPQGASSFADR VVSLEYNEATNVSGEYRDSSRALGIPDGNHVSLGNASDEMNSSALIVEFVNNRLVDVPGPDLYIFEVGPAVEATNVAIST DGQQWYELGRIQGATRSVDLARFNDLPPGAQYRFVRLRDYPDWRTSGSPYGGPDIDAIGAIGSVAASPEPVRVPPGNRPD LFNPEPGDTLQLGNNAQACRNGNVTFQAIGNPQVSLRFEPAQGFVTVPYIGVINHQQRGEVARFEYSISVGYPRANLILQ NSTTPTDPPSFPIYFFDGRLMPTYGDVKSEYAVISGFGSYDHYFNVERGSRTGGGEIGDVMWRQQCSG
Sequences:
>Translated_388_residues MLFSEFWRIVVANYFTILKWCARLIATMDVPTKNQSSIPSSVKICLSSALFLSLPLAISVKAEVYQGIDFPQGASSFADR VVSLEYNEATNVSGEYRDSSRALGIPDGNHVSLGNASDEMNSSALIVEFVNNRLVDVPGPDLYIFEVGPAVEATNVAIST DGQQWYELGRIQGATRSVDLARFNDLPPGAQYRFVRLRDYPDWRTSGSPYGGPDIDAIGAIGSVAASPEPVRVPPGNRPD LFNPEPGDTLQLGNNAQACRNGNVTFQAIGNPQVSLRFEPAQGFVTVPYIGVINHQQRGEVARFEYSISVGYPRANLILQ NSTTPTDPPSFPIYFFDGRLMPTYGDVKSEYAVISGFGSYDHYFNVERGSRTGGGEIGDVMWRQQCSG >Mature_388_residues MLFSEFWRIVVANYFTILKWCARLIATMDVPTKNQSSIPSSVKICLSSALFLSLPLAISVKAEVYQGIDFPQGASSFADR VVSLEYNEATNVSGEYRDSSRALGIPDGNHVSLGNASDEMNSSALIVEFVNNRLVDVPGPDLYIFEVGPAVEATNVAIST DGQQWYELGRIQGATRSVDLARFNDLPPGAQYRFVRLRDYPDWRTSGSPYGGPDIDAIGAIGSVAASPEPVRVPPGNRPD LFNPEPGDTLQLGNNAQACRNGNVTFQAIGNPQVSLRFEPAQGFVTVPYIGVINHQQRGEVARFEYSISVGYPRANLILQ NSTTPTDPPSFPIYFFDGRLMPTYGDVKSEYAVISGFGSYDHYFNVERGSRTGGGEIGDVMWRQQCSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42381; Mature: 42381
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFSEFWRIVVANYFTILKWCARLIATMDVPTKNQSSIPSSVKICLSSALFLSLPLAISV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE KAEVYQGIDFPQGASSFADRVVSLEYNEATNVSGEYRDSSRALGIPDGNHVSLGNASDEM EHHHHCCCCCCCCHHHHHCEEEEEEECCCCCCCCCCCCCCCEECCCCCCEEECCCCCCCC NSSALIVEFVNNRLVDVPGPDLYIFEVGPAVEATNVAISTDGQQWYELGRIQGATRSVDL CCCEEEEEEECCEEEECCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEH ARFNDLPPGAQYRFVRLRDYPDWRTSGSPYGGPDIDAIGAIGSVAASPEPVRVPPGNRPD HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCHHHHCCCCCCEECCCCCCCC LFNPEPGDTLQLGNNAQACRNGNVTFQAIGNPQVSLRFEPAQGFVTVPYIGVINHQQRGE CCCCCCCCEEEECCCCHHHCCCCEEEEECCCCEEEEEEECCCCEEEECEEEEECCCCCCC VARFEYSISVGYPRANLILQNSTTPTDPPSFPIYFFDGRLMPTYGDVKSEYAVISGFGSY EEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEECCEEECCCCCCCCCEEEEECCCCC DHYFNVERGSRTGGGEIGDVMWRQQCSG CCEEEECCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MLFSEFWRIVVANYFTILKWCARLIATMDVPTKNQSSIPSSVKICLSSALFLSLPLAISV CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEE KAEVYQGIDFPQGASSFADRVVSLEYNEATNVSGEYRDSSRALGIPDGNHVSLGNASDEM EHHHHCCCCCCCCHHHHHCEEEEEEECCCCCCCCCCCCCCCEECCCCCCEEECCCCCCCC NSSALIVEFVNNRLVDVPGPDLYIFEVGPAVEATNVAISTDGQQWYELGRIQGATRSVDL CCCEEEEEEECCEEEECCCCCEEEEEECCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEH ARFNDLPPGAQYRFVRLRDYPDWRTSGSPYGGPDIDAIGAIGSVAASPEPVRVPPGNRPD HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHCHHHHCCCCCCEECCCCCCCC LFNPEPGDTLQLGNNAQACRNGNVTFQAIGNPQVSLRFEPAQGFVTVPYIGVINHQQRGE CCCCCCCCEEEECCCCHHHCCCCEEEEECCCCEEEEEEECCCCEEEECEEEEECCCCCCC VARFEYSISVGYPRANLILQNSTTPTDPPSFPIYFFDGRLMPTYGDVKSEYAVISGFGSY EEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEECCEEECCCCCCCCCEEEEECCCCC DHYFNVERGSRTGGGEIGDVMWRQQCSG CCEEEECCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA