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The map label for this gene is ctaCI [H]

Identifier: 170077779

GI number: 170077779

Start: 1193607

End: 1194602

Strand: Direct

Name: ctaCI [H]

Synonym: SYNPCC7002_A1162

Alternate gene names: 170077779

Gene position: 1193607-1194602 (Clockwise)

Preceding gene: 170077775

Following gene: 170077780

Centisome position: 39.68

GC content: 49.9

Gene sequence:

>996_bases
GTGAATATTCCCAATAGCATCACGACCTTGATCGCTGGAATTGCCATTACCCTCATCAGTCTCTGGTACGGTCAAAACCA
TGGTTTACTACCCGTTGCCGCCTCCGCCGACGCCAATGATGTCGATGAATTGTTTAATCTGATGATGACCATTGCCACTG
GTCTTTTTATCTTGATTGAAGGGGTTTTGGTGATTTGTCTAATTCGATTTCGCCGCAAACAGGGGGATTTAACCGATGGC
CCGGCGATCGAAGGCAATGTTCCCCTAGAGATTGTCTGGACAGCGATCCCCACCGTCATCGTCTTTATTTTGGCGATCTA
TAGCTTTGAAATCTATAACAAAATGGGCGGCCTCGACCCGATGGTCTCTGGGGGCGGTATGACCATGGCCCACCATCATC
AACATAACCCCAATACCATGGACAACATGGTGGCAATGGAACCAGATTCTAAAATTGCCATTGGCATTGGTAAATCCATG
TCGGCCAATGATGAAGATCCTTTAGTGGTTGACGTGAATGGCCTGCAATATGCCTGGATTTTCACCTACCCCGATACGGG
CATTGTCTCCGGGGATCTCCATGTGCCTGTGGATCGCCCAATTCAACTCAACATGAAAGCAGCAGACGTGATCCATGCTT
TCTGGCTCCCAGAATTTCGCATTAAACAAGATGTGATGCCCGGCCAGGTTTCACAACTGAGCTTTGTGGCCAACCGAGAA
GGCACCTACCCGGTGATTTGTGCAGAATTGTGCGGCTCTTACCATGGCGGCATGAAAACTACGATGACCGTTGAAACGGC
AGAGGGTTATGACCAATGGGTGCAGTCGCGCACAGTGGCGCTGCAAGATGGCGAGGGTCAACCGTTACCCGTCGATTCTA
CGGCCTTAACCGATGCAGAATTTCTCCAGGCCTACGCCGAGGAGATGGGGATTATTGAAAATACCCTAGAGCAGATTCCC
CATCATCCTTTGGGAATGATGTCGATGGCCCAGTAA

Upstream 100 bases:

>100_bases
TCAGTCAACCATGAAGATTGTGACAAACCAAAGGCATTTCCAAACAGTTTGTTTTAACGTGGTAACCAGCAGTTATTCCA
AAAAAGCTCCAACATTTCCC

Downstream 100 bases:

>100_bases
GGTCAGGCTTTTTCAAACAATTAAACCAACTAAACCTGTAACTAATTTTTTAGTAAACGCACGATAACTAATTAACGATC
AACCATGAGTGACGCGACAA

Product: cytochrome oxidase subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II; Oxidase aa(3) subunit 2 [H]

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MNIPNSITTLIAGIAITLISLWYGQNHGLLPVAASADANDVDELFNLMMTIATGLFILIEGVLVICLIRFRRKQGDLTDG
PAIEGNVPLEIVWTAIPTVIVFILAIYSFEIYNKMGGLDPMVSGGGMTMAHHHQHNPNTMDNMVAMEPDSKIAIGIGKSM
SANDEDPLVVDVNGLQYAWIFTYPDTGIVSGDLHVPVDRPIQLNMKAADVIHAFWLPEFRIKQDVMPGQVSQLSFVANRE
GTYPVICAELCGSYHGGMKTTMTVETAEGYDQWVQSRTVALQDGEGQPLPVDSTALTDAEFLQAYAEEMGIIENTLEQIP
HHPLGMMSMAQ

Sequences:

>Translated_331_residues
MNIPNSITTLIAGIAITLISLWYGQNHGLLPVAASADANDVDELFNLMMTIATGLFILIEGVLVICLIRFRRKQGDLTDG
PAIEGNVPLEIVWTAIPTVIVFILAIYSFEIYNKMGGLDPMVSGGGMTMAHHHQHNPNTMDNMVAMEPDSKIAIGIGKSM
SANDEDPLVVDVNGLQYAWIFTYPDTGIVSGDLHVPVDRPIQLNMKAADVIHAFWLPEFRIKQDVMPGQVSQLSFVANRE
GTYPVICAELCGSYHGGMKTTMTVETAEGYDQWVQSRTVALQDGEGQPLPVDSTALTDAEFLQAYAEEMGIIENTLEQIP
HHPLGMMSMAQ
>Mature_331_residues
MNIPNSITTLIAGIAITLISLWYGQNHGLLPVAASADANDVDELFNLMMTIATGLFILIEGVLVICLIRFRRKQGDLTDG
PAIEGNVPLEIVWTAIPTVIVFILAIYSFEIYNKMGGLDPMVSGGGMTMAHHHQHNPNTMDNMVAMEPDSKIAIGIGKSM
SANDEDPLVVDVNGLQYAWIFTYPDTGIVSGDLHVPVDRPIQLNMKAADVIHAFWLPEFRIKQDVMPGQVSQLSFVANRE
GTYPVICAELCGSYHGGMKTTMTVETAEGYDQWVQSRTVALQDGEGQPLPVDSTALTDAEFLQAYAEEMGIIENTLEQIP
HHPLGMMSMAQ

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=115, Percent_Identity=29.5652173913043, Blast_Score=70, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6226540, Length=199, Percent_Identity=25.6281407035176, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2; PF02790 COX2_TM [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 36146; Mature: 36146

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS00078 COX2 ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPNSITTLIAGIAITLISLWYGQNHGLLPVAASADANDVDELFNLMMTIATGLFILIE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
GVLVICLIRFRRKQGDLTDGPAIEGNVPLEIVWTAIPTVIVFILAIYSFEIYNKMGGLDP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MVSGGGMTMAHHHQHNPNTMDNMVAMEPDSKIAIGIGKSMSANDEDPLVVDVNGLQYAWI
EECCCCEEEEECCCCCCCHHHCEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCEEEEE
FTYPDTGIVSGDLHVPVDRPIQLNMKAADVIHAFWLPEFRIKQDVMPGQVSQLSFVANRE
EECCCCCEECCCEECCCCCCEEECCHHHHHHHHHHCCCHHHHHCCCCCCHHHHEEECCCC
GTYPVICAELCGSYHGGMKTTMTVETAEGYDQWVQSRTVALQDGEGQPLPVDSTALTDAE
CCCCCHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHCEEEEECCCCCCCCCCCHHCCHHH
FLQAYAEEMGIIENTLEQIPHHPLGMMSMAQ
HHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure
MNIPNSITTLIAGIAITLISLWYGQNHGLLPVAASADANDVDELFNLMMTIATGLFILIE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
GVLVICLIRFRRKQGDLTDGPAIEGNVPLEIVWTAIPTVIVFILAIYSFEIYNKMGGLDP
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MVSGGGMTMAHHHQHNPNTMDNMVAMEPDSKIAIGIGKSMSANDEDPLVVDVNGLQYAWI
EECCCCEEEEECCCCCCCHHHCEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCEEEEE
FTYPDTGIVSGDLHVPVDRPIQLNMKAADVIHAFWLPEFRIKQDVMPGQVSQLSFVANRE
EECCCCCEECCCEECCCCCCEEECCHHHHHHHHHHCCCHHHHHCCCCCCHHHHEEECCCC
GTYPVICAELCGSYHGGMKTTMTVETAEGYDQWVQSRTVALQDGEGQPLPVDSTALTDAE
CCCCCHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHCEEEEECCCCCCCCCCCHHCCHHH
FLQAYAEEMGIIENTLEQIPHHPLGMMSMAQ
HHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8383492; 8387368; 8905231 [H]