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The map label for this gene is speA [H]

Identifier: 170077776

GI number: 170077776

Start: 1189848

End: 1191293

Strand: Reverse

Name: speA [H]

Synonym: SYNPCC7002_A1159

Alternate gene names: 170077776

Gene position: 1191293-1189848 (Counterclockwise)

Preceding gene: 170077777

Following gene: 170077774

Centisome position: 39.6

GC content: 50.69

Gene sequence:

>1446_bases
ATGACGCCCCTGTTTTCGCGCCTGCTCGCCCTCGCCCACGATAACCATGCAGCCTTCTATGCCCCCGGTCACAAAGGTGG
TCAGGGGATTTTTTCTGGGTTGGCACAAGCCTGGGGGAAGGAAATTTTTCGGGCGGATTTACCGGAGCTCCCCGGTCTCG
ATAATTTATTTGCGCCAGAAGGGGTGATTTTAGAGGCTCAAACCCTAGCTGCCGAAACCTTTGGGGCCGATCAAACCTGG
TTTTTGGTCAATGGTTCCACCTGTGGGATTATCGCCGCCATTTTAGCGACGGTGGGGGAAGGGGAAAAAATTCTCTTACC
CCGCAATGTCCATCAATCGGCCATTTCCGGCTTGATTTTGTCTGGGGCGATGCCAGTTTTTGTGAATCCGCCCTACGATC
CCCAATGGGATTTGAGTTATGGTTTAACGCCAGAATCTGTTGAGCAAGCCTTGCAAATTCATCCTGATATTAAAGCGGTT
TTTGTTCTTTCTCCCACCTATCAAGGGGTTTGTCCAAATTTAAAGGAGATCGCCGCCATTACCCAGCGCCACAATATTCC
GCTCATCGTTGACGAAGCCCACGGTAGTCACTTTAAATTTCATCCTAATTTCCCGCCCCCTGTCCTCGAACTCGGTGCTG
ATCTGGTGATCCAATCGACCCACAAAACTCTGGGAGCGATGACCCAAGCTTCGATGCTCCATCGACAAGGAGCCAGGGTT
GATCCCCAGAAAATCAACCGTGCTTTGCAACTTGTCGAATCCACCAGTCCCAGCTATTTACTCCTGGCTTCCCTGGATGC
GGCCCGCGCCCAAATGGCAGCACAGGGCGAAACCCTTTGGTCAGAAACACTCGCTTTGGCGCAACGAGCACGGCAAGCTT
TGACCTCGATTCCAGGATTAAAAATTTTTGATCCCCAACCCCAGGCAGGCATCGAATATTTTGATCCCACCCGCCTCACC
GTTGATGTTTCGGGTTTAGGGTTAACAGGTTATGCCGCAGATGAAATCTTAACGGAAACTTTGGATGTGATTGCAGAACT
CCCCCTGGGGCGATCGCTCACTTTTATCCTCACCTTTGGCAATACAAACCAGGATATTCAGCGGCTAATCGATGCGTTTC
AAACCCTTAGTCAAAACAATCAAGCACAACAGCCTTTAAACAAGCCAAACATTTCAACCGATCAGCCTAAAACCTGCTAT
GGACTGCCACAACTCTCGCCGCGCCAAGCTTTTTTTGCCACCAGTAGAGCCATTACCCTTGAAGCCAGTCTCAATCAAAT
TTGCGCGGAGTTGATTTGTCCTTATCCCCCTGGGATTCCGGCGATTATGCCCGGCGAAAAAATTACGGCAGCAACCCTCG
CCAGCTTGCGCCAGACGTTACAACTGGGGGGAGTGATTACCGGGGCTAGTGATCCCAGCTTAAAAACGATTCGCGTGATT
GATTAA

Upstream 100 bases:

>100_bases
ATGATGTTGCTTTGTACAGCGATGGTGGTGGATAGTTTACCTGCGGTGCATGATGTCACTGCCCTGGTGACCACAACCTT
AGCCTCCCTGACTTAAATTA

Downstream 100 bases:

>100_bases
CTTAAAGCAAAAATTTGGCGATCGCCTCGGCGACTCCATCCTCTTCGACGGAGGTTGTCACCGCATCCGCAACGGCTTTG
AGGGCAGTAGGAGCATCCCC

Product: Orn/Lys/Arg decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MTPLFSRLLALAHDNHAAFYAPGHKGGQGIFSGLAQAWGKEIFRADLPELPGLDNLFAPEGVILEAQTLAAETFGADQTW
FLVNGSTCGIIAAILATVGEGEKILLPRNVHQSAISGLILSGAMPVFVNPPYDPQWDLSYGLTPESVEQALQIHPDIKAV
FVLSPTYQGVCPNLKEIAAITQRHNIPLIVDEAHGSHFKFHPNFPPPVLELGADLVIQSTHKTLGAMTQASMLHRQGARV
DPQKINRALQLVESTSPSYLLLASLDAARAQMAAQGETLWSETLALAQRARQALTSIPGLKIFDPQPQAGIEYFDPTRLT
VDVSGLGLTGYAADEILTETLDVIAELPLGRSLTFILTFGNTNQDIQRLIDAFQTLSQNNQAQQPLNKPNISTDQPKTCY
GLPQLSPRQAFFATSRAITLEASLNQICAELICPYPPGIPAIMPGEKITAATLASLRQTLQLGGVITGASDPSLKTIRVI
D

Sequences:

>Translated_481_residues
MTPLFSRLLALAHDNHAAFYAPGHKGGQGIFSGLAQAWGKEIFRADLPELPGLDNLFAPEGVILEAQTLAAETFGADQTW
FLVNGSTCGIIAAILATVGEGEKILLPRNVHQSAISGLILSGAMPVFVNPPYDPQWDLSYGLTPESVEQALQIHPDIKAV
FVLSPTYQGVCPNLKEIAAITQRHNIPLIVDEAHGSHFKFHPNFPPPVLELGADLVIQSTHKTLGAMTQASMLHRQGARV
DPQKINRALQLVESTSPSYLLLASLDAARAQMAAQGETLWSETLALAQRARQALTSIPGLKIFDPQPQAGIEYFDPTRLT
VDVSGLGLTGYAADEILTETLDVIAELPLGRSLTFILTFGNTNQDIQRLIDAFQTLSQNNQAQQPLNKPNISTDQPKTCY
GLPQLSPRQAFFATSRAITLEASLNQICAELICPYPPGIPAIMPGEKITAATLASLRQTLQLGGVITGASDPSLKTIRVI
D
>Mature_480_residues
TPLFSRLLALAHDNHAAFYAPGHKGGQGIFSGLAQAWGKEIFRADLPELPGLDNLFAPEGVILEAQTLAAETFGADQTWF
LVNGSTCGIIAAILATVGEGEKILLPRNVHQSAISGLILSGAMPVFVNPPYDPQWDLSYGLTPESVEQALQIHPDIKAVF
VLSPTYQGVCPNLKEIAAITQRHNIPLIVDEAHGSHFKFHPNFPPPVLELGADLVIQSTHKTLGAMTQASMLHRQGARVD
PQKINRALQLVESTSPSYLLLASLDAARAQMAAQGETLWSETLALAQRARQALTSIPGLKIFDPQPQAGIEYFDPTRLTV
DVSGLGLTGYAADEILTETLDVIAELPLGRSLTFILTFGNTNQDIQRLIDAFQTLSQNNQAQQPLNKPNISTDQPKTCYG
LPQLSPRQAFFATSRAITLEASLNQICAELICPYPPGIPAIMPGEKITAATLASLRQTLQLGGVITGASDPSLKTIRVID

Specific function: Catalyzes the formation of agmatine from arginine [H]

COG id: COG1982

COG function: function code E; Arginine/lysine/ornithine decarboxylases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-I family [H]

Homologues:

Organism=Escherichia coli, GI221142684, Length=575, Percent_Identity=24.3478260869565, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1786384, Length=572, Percent_Identity=24.3006993006993, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI87082193, Length=563, Percent_Identity=24.5115452930728, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1790573, Length=567, Percent_Identity=23.8095238095238, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI1786909, Length=394, Percent_Identity=24.6192893401015, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000310
- InterPro:   IPR008286
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF01276 OKR_DC_1; PF03711 OKR_DC_1_C [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 51751; Mature: 51620

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLFSRLLALAHDNHAAFYAPGHKGGQGIFSGLAQAWGKEIFRADLPELPGLDNLFAPE
CCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GVILEAQTLAAETFGADQTWFLVNGSTCGIIAAILATVGEGEKILLPRNVHQSAISGLIL
CEEEEHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
SGAMPVFVNPPYDPQWDLSYGLTPESVEQALQIHPDIKAVFVLSPTYQGVCPNLKEIAAI
HCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHH
TQRHNIPLIVDEAHGSHFKFHPNFPPPVLELGADLVIQSTHKTLGAMTQASMLHRQGARV
HHCCCCCEEEECCCCCEEEECCCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCC
DPQKINRALQLVESTSPSYLLLASLDAARAQMAAQGETLWSETLALAQRARQALTSIPGL
CHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
KIFDPQPQAGIEYFDPTRLTVDVSGLGLTGYAADEILTETLDVIAELPLGRSLTFILTFG
EEECCCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
NTNQDIQRLIDAFQTLSQNNQAQQPLNKPNISTDQPKTCYGLPQLSPRQAFFATSRAITL
CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCEEEE
EASLNQICAELICPYPPGIPAIMPGEKITAATLASLRQTLQLGGVITGASDPSLKTIRVI
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEE
D
C
>Mature Secondary Structure 
TPLFSRLLALAHDNHAAFYAPGHKGGQGIFSGLAQAWGKEIFRADLPELPGLDNLFAPE
CHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GVILEAQTLAAETFGADQTWFLVNGSTCGIIAAILATVGEGEKILLPRNVHQSAISGLIL
CEEEEHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
SGAMPVFVNPPYDPQWDLSYGLTPESVEQALQIHPDIKAVFVLSPTYQGVCPNLKEIAAI
HCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHH
TQRHNIPLIVDEAHGSHFKFHPNFPPPVLELGADLVIQSTHKTLGAMTQASMLHRQGARV
HHCCCCCEEEECCCCCEEEECCCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCCC
DPQKINRALQLVESTSPSYLLLASLDAARAQMAAQGETLWSETLALAQRARQALTSIPGL
CHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
KIFDPQPQAGIEYFDPTRLTVDVSGLGLTGYAADEILTETLDVIAELPLGRSLTFILTFG
EEECCCCCCCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
NTNQDIQRLIDAFQTLSQNNQAQQPLNKPNISTDQPKTCYGLPQLSPRQAFFATSRAITL
CCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCEEEE
EASLNQICAELICPYPPGIPAIMPGEKITAATLASLRQTLQLGGVITGASDPSLKTIRVI
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEE
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]