| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077752
Identifier: 170077752
GI number: 170077752
Start: 1168134
End: 1168631
Strand: Reverse
Name: 170077752
Synonym: SYNPCC7002_A1134
Alternate gene names: NA
Gene position: 1168631-1168134 (Counterclockwise)
Preceding gene: 170077753
Following gene: 170077751
Centisome position: 38.85
GC content: 35.14
Gene sequence:
>498_bases ATGAAGCGCTTTTTAATTGGTGCTCCAGCTAGTGGTAAAAGCACGATAGGTAGCATTATTGCCAAGGGTAGTGATTATTG TCATACATCGATTGACTGTTTTGTACACTTAGTATACAGCTACTCCGTTGTGAATCGTCCAATGTTGGATTCAGAAATTG ATGAGGCTCTACATAAGCTATTGCTTTTCTCTGGTAAAAATCTAATTTATGAGTTTTCCTATCATGATTATCATAAGTTA TTTGGGAAACCTTATCTGCTGTTTAGTGAAGAAGATAGAGTTGTAATTGTAACTGCTCCTCTTGAAATTTGTCTGCAAAG AAATAGGTCTAGAGCAAATACTATTCCTGAAAAATACTTGATACGTTGTTGGCACAGTACAAATCAGATTTTTGAGCGAT TTTTGAGTTTATCTTTATGCAATTTCATTGTTGTGAACACCTCTATTGAGTCGCAAAATGCATGTGCACAGATTGCAAGA AGCTTTTTTGATGCATAA
Upstream 100 bases:
>100_bases CTGGAATAATGATTTTTTTCAAAAGGTCAGAGAGTTTCATATGTCTTGTAACTGGTCTGAAACTACAATCTGTGAATCTT GTATTCAGGATATTTAATGT
Downstream 100 bases:
>100_bases AAGCCCACGCTACCCATACTTTTTGGTTATATGTTATCAATCAAGCAGAAATGTGTTCACATAACCTCATAAGCTGAGTT TCTTAGCAAAAGTTCTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKRFLIGAPASGKSTIGSIIAKGSDYCHTSIDCFVHLVYSYSVVNRPMLDSEIDEALHKLLLFSGKNLIYEFSYHDYHKL FGKPYLLFSEEDRVVIVTAPLEICLQRNRSRANTIPEKYLIRCWHSTNQIFERFLSLSLCNFIVVNTSIESQNACAQIAR SFFDA
Sequences:
>Translated_165_residues MKRFLIGAPASGKSTIGSIIAKGSDYCHTSIDCFVHLVYSYSVVNRPMLDSEIDEALHKLLLFSGKNLIYEFSYHDYHKL FGKPYLLFSEEDRVVIVTAPLEICLQRNRSRANTIPEKYLIRCWHSTNQIFERFLSLSLCNFIVVNTSIESQNACAQIAR SFFDA >Mature_165_residues MKRFLIGAPASGKSTIGSIIAKGSDYCHTSIDCFVHLVYSYSVVNRPMLDSEIDEALHKLLLFSGKNLIYEFSYHDYHKL FGKPYLLFSEEDRVVIVTAPLEICLQRNRSRANTIPEKYLIRCWHSTNQIFERFLSLSLCNFIVVNTSIESQNACAQIAR SFFDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18883; Mature: 18883
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFLIGAPASGKSTIGSIIAKGSDYCHTSIDCFVHLVYSYSVVNRPMLDSEIDEALHKL CCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LLFSGKNLIYEFSYHDYHKLFGKPYLLFSEEDRVVIVTAPLEICLQRNRSRANTIPEKYL HHHCCCCEEEECCCHHHHHHHCCEEEEECCCCCEEEEECCHHHHHHCCCCCCCCCCHHHH IRCWHSTNQIFERFLSLSLCNFIVVNTSIESQNACAQIARSFFDA HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKRFLIGAPASGKSTIGSIIAKGSDYCHTSIDCFVHLVYSYSVVNRPMLDSEIDEALHKL CCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LLFSGKNLIYEFSYHDYHKLFGKPYLLFSEEDRVVIVTAPLEICLQRNRSRANTIPEKYL HHHCCCCEEEECCCHHHHHHHCCEEEEECCCCCEEEEECCHHHHHHCCCCCCCCCCHHHH IRCWHSTNQIFERFLSLSLCNFIVVNTSIESQNACAQIARSFFDA HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA