| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is rffM [H]
Identifier: 170077735
GI number: 170077735
Start: 1147283
End: 1148008
Strand: Reverse
Name: rffM [H]
Synonym: SYNPCC7002_A1117
Alternate gene names: 170077735
Gene position: 1148008-1147283 (Counterclockwise)
Preceding gene: 170077737
Following gene: 170077734
Centisome position: 38.16
GC content: 51.52
Gene sequence:
>726_bases ATGTTGACTGCTGAATCTTTTCTGCCGAGTGTCCCTGTATTTCAGGTGTTGGTACATCTACACCCCAACTATTGCCAATG GCTGACTGAGCGGATCCAGCACCATCAGGGAACGCACGTGGTCACCCTCAACGCCGAAATTGCGATGATGACGGAAAAAA ACAAGGCGATCGCCAAGGTGATTAAGCAGGCAGATTTGATTATTCCCGACGGCGCAGGGATCGTCCTCTACCTCAAGCTC AAGGGTAAAAAACAACACCGAGTACCCGGCATCGAACTCGCAGAACAACTGTTAGCCCAGGCTGCGGCCCATGATTGGCG CGTCGTCTTTTTTGGTGGCTCCCCTGGGATTGCCGACCAAGCAAAGGAAAATTGGCTCAAACGTTATCCTGATTTAGATA TCACGACCCAGCACGGCTATCTCAACTCAGAAATGGCGGCGGACTGGGAGCATCAGTTGCAGCAGTTGCAACCCCAACTC ATTTTTACTTGCCTCGGTGTCCCGAAACAGGAATTTTGGATCGAAGAACATCGCCACCTTTGTCCCCACAGCACTTGGAT CGGTCTAGGGGGAAGCTTTGATGTGTGGGCTGGCGTCAAACAGCGCGCCCCGAAACTGTGGCAAAAACTTCATTTGGAGT GGCTTTATCGTCTTTATCAGGAACCTTGGCGTTGGCGACGGATGTTGGCGTTACCACAATTTGTTTGGCGTGCTTTGTGG TCTTAG
Upstream 100 bases:
>100_bases TGAGAACTTTAGACAAGCGCGATCAATAGCCTGCTAGAGTGGATGCTATATCTTGACGCCTAATTTTTTGTCTATTTCAC TAAGGTGTTGACGTTCGTCT
Downstream 100 bases:
>100_bases TCAATTCAAATGCTTGAAGTCAAAAGCAACATTTGCAGAATTGAGTAGGATTAAAGAAACATCATCAACGAATCAAGGTG CTTGGTATGGTAGACACCCT
Product: UDP-N-acetyl-D-mannosaminuronic acid transferase
Products: NA
Alternate protein names: N-acetylglucosaminyldiphospho-undecaprenol N-acetyl-beta-D-mannosaminyltransferase; UDP-N-acetylmannosamine transferase [H]
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MLTAESFLPSVPVFQVLVHLHPNYCQWLTERIQHHQGTHVVTLNAEIAMMTEKNKAIAKVIKQADLIIPDGAGIVLYLKL KGKKQHRVPGIELAEQLLAQAAAHDWRVVFFGGSPGIADQAKENWLKRYPDLDITTQHGYLNSEMAADWEHQLQQLQPQL IFTCLGVPKQEFWIEEHRHLCPHSTWIGLGGSFDVWAGVKQRAPKLWQKLHLEWLYRLYQEPWRWRRMLALPQFVWRALW S
Sequences:
>Translated_241_residues MLTAESFLPSVPVFQVLVHLHPNYCQWLTERIQHHQGTHVVTLNAEIAMMTEKNKAIAKVIKQADLIIPDGAGIVLYLKL KGKKQHRVPGIELAEQLLAQAAAHDWRVVFFGGSPGIADQAKENWLKRYPDLDITTQHGYLNSEMAADWEHQLQQLQPQL IFTCLGVPKQEFWIEEHRHLCPHSTWIGLGGSFDVWAGVKQRAPKLWQKLHLEWLYRLYQEPWRWRRMLALPQFVWRALW S >Mature_241_residues MLTAESFLPSVPVFQVLVHLHPNYCQWLTERIQHHQGTHVVTLNAEIAMMTEKNKAIAKVIKQADLIIPDGAGIVLYLKL KGKKQHRVPGIELAEQLLAQAAAHDWRVVFFGGSPGIADQAKENWLKRYPDLDITTQHGYLNSEMAADWEHQLQQLQPQL IFTCLGVPKQEFWIEEHRHLCPHSTWIGLGGSFDVWAGVKQRAPKLWQKLHLEWLYRLYQEPWRWRRMLALPQFVWRALW S
Specific function: Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, a key lipid intermediate in the de novo synthesis of teichoic acid (Potential) [H]
COG id: COG1922
COG function: function code M; Teichoic acid biosynthesis proteins
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 26 family [H]
Homologues:
Organism=Escherichia coli, GI2367289, Length=194, Percent_Identity=32.4742268041237, Blast_Score=108, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004629 [H]
Pfam domain/function: PF03808 Glyco_tran_WecB [H]
EC number: =2.4.1.187 [H]
Molecular weight: Translated: 28073; Mature: 28073
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTAESFLPSVPVFQVLVHLHPNYCQWLTERIQHHQGTHVVTLNAEIAMMTEKNKAIAKV CCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCEEEEEECCHHHHHHH IKQADLIIPDGAGIVLYLKLKGKKQHRVPGIELAEQLLAQAAAHDWRVVFFGGSPGIADQ HHHCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHH AKENWLKRYPDLDITTQHGYLNSEMAADWEHQLQQLQPQLIFTCLGVPKQEFWIEEHRHL HHHHHHHHCCCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC CPHSTWIGLGGSFDVWAGVKQRAPKLWQKLHLEWLYRLYQEPWRWRRMLALPQFVWRALW CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC S C >Mature Secondary Structure MLTAESFLPSVPVFQVLVHLHPNYCQWLTERIQHHQGTHVVTLNAEIAMMTEKNKAIAKV CCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCEEEEEECCHHHHHHH IKQADLIIPDGAGIVLYLKLKGKKQHRVPGIELAEQLLAQAAAHDWRVVFFGGSPGIADQ HHHCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHH AKENWLKRYPDLDITTQHGYLNSEMAADWEHQLQQLQPQLIFTCLGVPKQEFWIEEHRHL HHHHHHHHCCCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC CPHSTWIGLGGSFDVWAGVKQRAPKLWQKLHLEWLYRLYQEPWRWRRMLALPQFVWRALW CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11882717 [H]