Click here to switch to the map view.

The map label for this gene is gidA

Identifier: 170077730

GI number: 170077730

Start: 1141303

End: 1143222

Strand: Reverse

Name: gidA

Synonym: SYNPCC7002_A1112

Alternate gene names: 170077730

Gene position: 1143222-1141303 (Counterclockwise)

Preceding gene: 170077731

Following gene: 170077729

Centisome position: 38.01

GC content: 52.08

Gene sequence:

>1920_bases
ATGCTGCGAACCCCCGTTGATTTTCAAGATGAGTTTGATGTCATTGTCATTGGTGCTGGCCATTCCGGTTGTGAAGCGGC
TTTGGCCTCGGCCCGTTTAGGCTGCCGCACGCTGATGTTGACCCTCAACCTCGACAAAATCGCCTGGCAACCCTGTAATC
CCGCCGTGGGCGGCCCCGCAAAATCCCAGCTAACCCACGAAGTGGATGCCTTGGGGGGGGAAATCGGTAAGATGGCAGAC
CGCACCTATCTCCAAAAGCGGGTGCTCAATGCGTCCCGGGGGCCAGCCGTCTGGGCCTTGCGCGCCCAAACCGATAAGCG
CGAGTACGCTGCAGTGATGAAAAATATCGTTGAAAACCAAGATAATCTTGTGATTCGTGAGGGGATGGCGACGGATCTTG
TGTTAGGCAACAACGATGAGATTTGTGGGATTCAAACCTATTTTGGGACTTGTTTTGGGGCCAAGGCCGTTGTCCTAACA
ACGGGGACTTTCCTTGGGGGAACGATCTGGATTGGGAACAAATCGATGCCTGCGGGCCGAGCCGGGGAATTTGCAGCAGT
GGGCATGACAGAAACCTTAAACGAGTTGGGGTTTGAGACGGGGCGCTTAAAAACAGGCACCCCCGCCCGGGTGGATCGCC
GTTCGGTTGATTACAGCAAAATGGAAATTCAACCGGCAGACGAAGAGGTACGGTGGTTTAGCTTTGATCCCGAAGCCTGG
GTAGAGCGTGAACAAATGCCCTGTTACCTGACTCGAACAACCCCAAAGACCCATCAATTGATTAAAGACAATCTGCACCT
GTCTCCCATCTATGGTGGCTTCATTGATTCCAAAGGCCCCCGTTATTGTCCGAGCATTGAAGACAAGATTGTCCGGTTTG
CTGATAAGGATTCCCACCAAATTTTTATTGAACCGGAAGGGCGCACGATTCCAGAGCTTTATATCCAAGGTTTTTCGACG
GGACTGCCCGAAAGTCTCCAGTTACAGATGCTCCAAAGTCTGCCGGGGATGGAAGATTGTGTGATGCTCCGCCCAGCCTA
TGCGGTGGAATATGACTACTTACCCGCAACCCAGTGTTACCCCACCCTGATGACCAAGCGCGTCGAAGGTTTATTTTCAG
CGGGACAAATCAATGGCACCACGGGCTACGAAGAAGCAGCAGCCCAAGGGATCGTGGCAGGTATCAACGCGGCGAAATTT
GCCCAGGGTCAGGACATGGTTGTTTTTCCCCGGGAACAAAGCTATCTAGGTACTTTGATTGATGATCTGTGTACAAAGGA
TTTGCGGGAACCCTACCGGATGCTGACTTCCCGTTCGGAATATCGCTTGATTCTCCGTTCCGATAATGCTGATCAGCGGT
TAACGCCCCTGGGCCGGGAGATTGGTTTAATTGGCGATCGCCGTTGGGCCTTGTACCAAACGAAGCAGGAAAATATTGCT
GCCGAAAAAGAACGACTCCACACGGAGCGGGTCAAAGAATTGGATCCCTTGGGCCAGAAAATTGCGGCGGATACGGGCCA
AAAAATTAAAAGTTCTGTGACCTTAGCGGATTTATTGCGGCGACCCAAGTTCCACTATGCCGATCTCGCCAGTTATGGCT
TGGGGAATGAGGCGCTCACCCAGGCAGAGCAAGCAGGGGCAGAAATTGATATTAAATATTCTGGCTATATCAAGCGGCAA
CAAAACCAAATTGACCAAATTAGCCGCCATGCGAATCGGAAGTTGCCGGAAGGTTTGGATTACTTGACGGTGGAAACCCT
GTCGATGGAAGCCCGGGAAAAATTAAATAAGGTGCGCCCCCTCACCATTGGTCAGGCCACACGCATTGGCGGCGTCAACC
CGGCAGATATTAATGCGTTGCTGGTTTATTTGGAGGTGCAACATCGTCAGAAAAACGCCCAGGAAGCCGTTACCTCCTAA

Upstream 100 bases:

>100_bases
TTCAGGGGCTAAACTCATACTTTGCCCAGCGAACAATCTGCCTTGCCTTGATAGAATATTGAATCCCTAGTCCTAACCCA
TCATTCCCCAAAACAAAACA

Downstream 100 bases:

>100_bases
ATCAACGACCCTGGGGGATGGATTCTGGGGTTGAGTTTTGCTCGCACAGGATTAGCAATGTCTTGATGTCCTAGGGGATC
GTCTCGGTGGAGCGCGGCGC

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: Glucose-inhibited division protein A

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MLRTPVDFQDEFDVIVIGAGHSGCEAALASARLGCRTLMLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMAD
RTYLQKRVLNASRGPAVWALRAQTDKREYAAVMKNIVENQDNLVIREGMATDLVLGNNDEICGIQTYFGTCFGAKAVVLT
TGTFLGGTIWIGNKSMPAGRAGEFAAVGMTETLNELGFETGRLKTGTPARVDRRSVDYSKMEIQPADEEVRWFSFDPEAW
VEREQMPCYLTRTTPKTHQLIKDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKDSHQIFIEPEGRTIPELYIQGFST
GLPESLQLQMLQSLPGMEDCVMLRPAYAVEYDYLPATQCYPTLMTKRVEGLFSAGQINGTTGYEEAAAQGIVAGINAAKF
AQGQDMVVFPREQSYLGTLIDDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIGDRRWALYQTKQENIA
AEKERLHTERVKELDPLGQKIAADTGQKIKSSVTLADLLRRPKFHYADLASYGLGNEALTQAEQAGAEIDIKYSGYIKRQ
QNQIDQISRHANRKLPEGLDYLTVETLSMEAREKLNKVRPLTIGQATRIGGVNPADINALLVYLEVQHRQKNAQEAVTS

Sequences:

>Translated_639_residues
MLRTPVDFQDEFDVIVIGAGHSGCEAALASARLGCRTLMLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMAD
RTYLQKRVLNASRGPAVWALRAQTDKREYAAVMKNIVENQDNLVIREGMATDLVLGNNDEICGIQTYFGTCFGAKAVVLT
TGTFLGGTIWIGNKSMPAGRAGEFAAVGMTETLNELGFETGRLKTGTPARVDRRSVDYSKMEIQPADEEVRWFSFDPEAW
VEREQMPCYLTRTTPKTHQLIKDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKDSHQIFIEPEGRTIPELYIQGFST
GLPESLQLQMLQSLPGMEDCVMLRPAYAVEYDYLPATQCYPTLMTKRVEGLFSAGQINGTTGYEEAAAQGIVAGINAAKF
AQGQDMVVFPREQSYLGTLIDDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIGDRRWALYQTKQENIA
AEKERLHTERVKELDPLGQKIAADTGQKIKSSVTLADLLRRPKFHYADLASYGLGNEALTQAEQAGAEIDIKYSGYIKRQ
QNQIDQISRHANRKLPEGLDYLTVETLSMEAREKLNKVRPLTIGQATRIGGVNPADINALLVYLEVQHRQKNAQEAVTS
>Mature_639_residues
MLRTPVDFQDEFDVIVIGAGHSGCEAALASARLGCRTLMLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMAD
RTYLQKRVLNASRGPAVWALRAQTDKREYAAVMKNIVENQDNLVIREGMATDLVLGNNDEICGIQTYFGTCFGAKAVVLT
TGTFLGGTIWIGNKSMPAGRAGEFAAVGMTETLNELGFETGRLKTGTPARVDRRSVDYSKMEIQPADEEVRWFSFDPEAW
VEREQMPCYLTRTTPKTHQLIKDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKDSHQIFIEPEGRTIPELYIQGFST
GLPESLQLQMLQSLPGMEDCVMLRPAYAVEYDYLPATQCYPTLMTKRVEGLFSAGQINGTTGYEEAAAQGIVAGINAAKF
AQGQDMVVFPREQSYLGTLIDDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIGDRRWALYQTKQENIA
AEKERLHTERVKELDPLGQKIAADTGQKIKSSVTLADLLRRPKFHYADLASYGLGNEALTQAEQAGAEIDIKYSGYIKRQ
QNQIDQISRHANRKLPEGLDYLTVETLSMEAREKLNKVRPLTIGQATRIGGVNPADINALLVYLEVQHRQKNAQEAVTS

Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34

COG id: COG0445

COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family

Homologues:

Organism=Homo sapiens, GI74024895, Length=654, Percent_Identity=40.6727828746177, Blast_Score=434, Evalue=1e-121,
Organism=Homo sapiens, GI19882217, Length=679, Percent_Identity=39.6170839469809, Blast_Score=420, Evalue=1e-117,
Organism=Homo sapiens, GI183227703, Length=694, Percent_Identity=38.328530259366, Blast_Score=414, Evalue=1e-115,
Organism=Escherichia coli, GI2367273, Length=622, Percent_Identity=49.3569131832797, Blast_Score=586, Evalue=1e-168,
Organism=Caenorhabditis elegans, GI17534255, Length=623, Percent_Identity=40.2889245585875, Blast_Score=432, Evalue=1e-121,
Organism=Saccharomyces cerevisiae, GI6321202, Length=640, Percent_Identity=42.65625, Blast_Score=457, Evalue=1e-129,
Organism=Drosophila melanogaster, GI24658174, Length=637, Percent_Identity=40.6593406593407, Blast_Score=422, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MNMG_SYNP2 (B1XJY4)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734368.1
- ProteinModelPortal:   B1XJY4
- SMR:   B1XJY4
- GeneID:   6056964
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1112
- HOGENOM:   HBG284774
- OMA:   GIQFRVL
- ProtClustDB:   PRK05192
- GO:   GO:0005737
- HAMAP:   MF_00129
- InterPro:   IPR004416
- InterPro:   IPR002218
- InterPro:   IPR020595
- TIGRFAMs:   TIGR00136

Pfam domain/function: PF01134 GIDA

EC number: NA

Molecular weight: Translated: 71013; Mature: 71013

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTPVDFQDEFDVIVIGAGHSGCEAALASARLGCRTLMLTLNLDKIAWQPCNPAVGGPA
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCCCCCCCCCCH
KSQLTHEVDALGGEIGKMADRTYLQKRVLNASRGPAVWALRAQTDKREYAAVMKNIVENQ
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCC
DNLVIREGMATDLVLGNNDEICGIQTYFGTCFGAKAVVLTTGTFLGGTIWIGNKSMPAGR
CCEEEECCCCEEEEECCCCCEEEEHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCC
AGEFAAVGMTETLNELGFETGRLKTGTPARVDRRSVDYSKMEIQPADEEVRWFSFDPEAW
CCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCHHHH
VEREQMPCYLTRTTPKTHQLIKDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKDSHQ
HHHCCCCEEEECCCCHHHHHHHCCCEECEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCE
IFIEPEGRTIPELYIQGFSTGLPESLQLQMLQSLPGMEDCVMLRPAYAVEYDYLPATQCY
EEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCCHHHH
PTLMTKRVEGLFSAGQINGTTGYEEAAAQGIVAGINAAKFAQGQDMVVFPREQSYLGTLI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCEEEECCCHHHHHHHH
DDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIGDRRWALYQTKQENIA
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCEEEEEECHHHHHH
AEKERLHTERVKELDPLGQKIAADTGQKIKSSVTLADLLRRPKFHYADLASYGLGNEALT
HHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHH
QAEQAGAEIDIKYSGYIKRQQNQIDQISRHANRKLPEGLDYLTVETLSMEAREKLNKVRP
HHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHCCC
LTIGQATRIGGVNPADINALLVYLEVQHRQKNAQEAVTS
EECCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MLRTPVDFQDEFDVIVIGAGHSGCEAALASARLGCRTLMLTLNLDKIAWQPCNPAVGGPA
CCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCCCCCCCCCCH
KSQLTHEVDALGGEIGKMADRTYLQKRVLNASRGPAVWALRAQTDKREYAAVMKNIVENQ
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCC
DNLVIREGMATDLVLGNNDEICGIQTYFGTCFGAKAVVLTTGTFLGGTIWIGNKSMPAGR
CCEEEECCCCEEEEECCCCCEEEEHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCC
AGEFAAVGMTETLNELGFETGRLKTGTPARVDRRSVDYSKMEIQPADEEVRWFSFDPEAW
CCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCHHHH
VEREQMPCYLTRTTPKTHQLIKDNLHLSPIYGGFIDSKGPRYCPSIEDKIVRFADKDSHQ
HHHCCCCEEEECCCCHHHHHHHCCCEECEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCE
IFIEPEGRTIPELYIQGFSTGLPESLQLQMLQSLPGMEDCVMLRPAYAVEYDYLPATQCY
EEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCCHHHH
PTLMTKRVEGLFSAGQINGTTGYEEAAAQGIVAGINAAKFAQGQDMVVFPREQSYLGTLI
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCEEEECCCHHHHHHHH
DDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIGDRRWALYQTKQENIA
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCEEEEEECHHHHHH
AEKERLHTERVKELDPLGQKIAADTGQKIKSSVTLADLLRRPKFHYADLASYGLGNEALT
HHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHH
QAEQAGAEIDIKYSGYIKRQQNQIDQISRHANRKLPEGLDYLTVETLSMEAREKLNKVRP
HHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHCCC
LTIGQATRIGGVNPADINALLVYLEVQHRQKNAQEAVTS
EECCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA