| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is bcp [H]
Identifier: 170077726
GI number: 170077726
Start: 1136008
End: 1136472
Strand: Reverse
Name: bcp [H]
Synonym: SYNPCC7002_A1108
Alternate gene names: 170077726
Gene position: 1136472-1136008 (Counterclockwise)
Preceding gene: 170077727
Following gene: 170077724
Centisome position: 37.78
GC content: 51.18
Gene sequence:
>465_bases ATGACGACCCTGACGATTGGCCAAGCAGCCCCTGATTTTGCCCTCACCAATGCCCAAGGTGAAGCCCGTACCCTAGCGGA CTACAGCGGCAAATGGCTCGTTTTTTATTTTTACCCCAAGGACAATACCCCCGGTTGCACCACCGAAGCCCTAGACTTTA CGGCCCTTGTCCCCGAATTTACCGCCTTGAATGCCGTGATCGTGGGCGTGAGTCCCGATTCGGAAAAATCCCATGGCCGC TTCATTGAAAAAAAAGAGTTAGCCATCGAACTGTTGAGCGATCCCGACCATCAAACCGCCGGGGTCTATGGGGTCTGGCA ACTGAAAAAATTTATGGGCAAAGAATATATGGGGATTGTTCGCAGTACGTTTTTAATCGATCCCCAGGGTCAAGTGGCGG CAATTTGGTCAAAGGTGAAGGTTAAAGGCCATGCTCAAACGGTACTGGAGACGCTCCAAACCTAA
Upstream 100 bases:
>100_bases TCTTCGGGCAATGCAGGGCTTCGCTCAAAGCTCACTCTAGAGATCTGCTTTGGCCTAAGGAATAATACAGTTATAAATTT TCAAGTGAACGCCTAATTCC
Downstream 100 bases:
>100_bases CTGTCGGGAAATTAGGAAAAAGTTTGGTGATCCCGCTGGCGACGGGCCTCGTAGAGCATCAAGGCACAGGCGATCGCCAC ATTGAGAGATTCGACCCCCG
Product: bacterioferritin comigratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTTLTIGQAAPDFALTNAQGEARTLADYSGKWLVFYFYPKDNTPGCTTEALDFTALVPEFTALNAVIVGVSPDSEKSHGR FIEKKELAIELLSDPDHQTAGVYGVWQLKKFMGKEYMGIVRSTFLIDPQGQVAAIWSKVKVKGHAQTVLETLQT
Sequences:
>Translated_154_residues MTTLTIGQAAPDFALTNAQGEARTLADYSGKWLVFYFYPKDNTPGCTTEALDFTALVPEFTALNAVIVGVSPDSEKSHGR FIEKKELAIELLSDPDHQTAGVYGVWQLKKFMGKEYMGIVRSTFLIDPQGQVAAIWSKVKVKGHAQTVLETLQT >Mature_153_residues TTLTIGQAAPDFALTNAQGEARTLADYSGKWLVFYFYPKDNTPGCTTEALDFTALVPEFTALNAVIVGVSPDSEKSHGRF IEKKELAIELLSDPDHQTAGVYGVWQLKKFMGKEYMGIVRSTFLIDPQGQVAAIWSKVKVKGHAQTVLETLQT
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4505591, Length=141, Percent_Identity=36.8794326241135, Blast_Score=74, Evalue=6e-14, Organism=Homo sapiens, GI32455266, Length=141, Percent_Identity=36.8794326241135, Blast_Score=74, Evalue=6e-14, Organism=Homo sapiens, GI32455264, Length=141, Percent_Identity=36.8794326241135, Blast_Score=74, Evalue=6e-14, Organism=Homo sapiens, GI32189392, Length=140, Percent_Identity=36.4285714285714, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI5802974, Length=138, Percent_Identity=35.5072463768116, Blast_Score=66, Evalue=1e-11, Organism=Homo sapiens, GI5453549, Length=129, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=1e-11, Organism=Escherichia coli, GI1788825, Length=153, Percent_Identity=39.8692810457516, Blast_Score=121, Evalue=3e-29, Organism=Caenorhabditis elegans, GI193204376, Length=146, Percent_Identity=35.6164383561644, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32565831, Length=146, Percent_Identity=35.6164383561644, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17554494, Length=113, Percent_Identity=38.9380530973451, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322180, Length=127, Percent_Identity=31.496062992126, Blast_Score=65, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319407, Length=144, Percent_Identity=29.8611111111111, Blast_Score=65, Evalue=5e-12, Organism=Drosophila melanogaster, GI17738015, Length=140, Percent_Identity=35, Blast_Score=73, Evalue=6e-14, Organism=Drosophila melanogaster, GI24656348, Length=145, Percent_Identity=33.7931034482759, Blast_Score=63, Evalue=9e-11, Organism=Drosophila melanogaster, GI17864676, Length=145, Percent_Identity=33.7931034482759, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16929; Mature: 16798
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLTIGQAAPDFALTNAQGEARTLADYSGKWLVFYFYPKDNTPGCTTEALDFTALVPEF CCEEECCCCCCCCEEECCCCCCEEHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCC TALNAVIVGVSPDSEKSHGRFIEKKELAIELLSDPDHQTAGVYGVWQLKKFMGKEYMGIV CCCEEEEEEECCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHH RSTFLIDPQGQVAAIWSKVKVKGHAQTVLETLQT HHHEEECCCCCEEEEEHHEEECCHHHHHHHHHCC >Mature Secondary Structure TTLTIGQAAPDFALTNAQGEARTLADYSGKWLVFYFYPKDNTPGCTTEALDFTALVPEF CEEECCCCCCCCEEECCCCCCEEHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCC TALNAVIVGVSPDSEKSHGRFIEKKELAIELLSDPDHQTAGVYGVWQLKKFMGKEYMGIV CCCEEEEEEECCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHH RSTFLIDPQGQVAAIWSKVKVKGHAQTVLETLQT HHHEEECCCCCEEEEEHHEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]