| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is apaH [H]
Identifier: 170077721
GI number: 170077721
Start: 1129999
End: 1130718
Strand: Direct
Name: apaH [H]
Synonym: SYNPCC7002_A1101
Alternate gene names: 170077721
Gene position: 1129999-1130718 (Clockwise)
Preceding gene: 170077720
Following gene: 170077722
Centisome position: 37.57
GC content: 53.47
Gene sequence:
>720_bases ATGGGTCAGCGACGAATCTGTATAGGAGATGTGCATGGTCATTACGATACGTTGATGGCCCTGCTGGAGCTGGTTGCGCC CGGAACAGAAGATGCGGTTTACTTCCTCGGTGATCTGATTGACCGAGGCCCCAAAAGTGCAGACATTATTGAGTTTGTGC GCCGTAGTTCCTATCAGTCTCTCCTCGGTAACCATGAAATGATGATGCTAGAGGCGATCGCCAACGATGGCAGCGTCCAG CAAGAAACCTTTATCGCCTGGTACCATAGCGGCGGTGCGAATACCCTCCAAAGCTATAATCACCGCATCCCGGCCGAACA TTTACAATGGTTGCGACAGCGGCCCACCCACCTCGATCTAGGGGATGTTTGGTTAGTCCATGCGGGCCTTTCCCCCCACC TACCCATCGAGCAACAGGGGGCGGAACAATTCTGTTGGGTGCGCAGTGAGTTTCATTCCATGACCCAGCCCTACTTTGCC AATAAGCTGATTATTGTCGGCCATACGATCACCTTCACCTTTCCGGGGGTACAACCGGGACAGGTGGTGCAGGGGCCGGG CTGGTTGGACATTGACACCGGGGTCTACCACACCAAAAGCGGCTGGTTAACTGCTTTTGATATTGACCAGCGCCAAATCT ATCAAGTCAATAGCCACACCGCCGAAAAACGCCAACTCCCCCTAGATGCGATCGCCGTTACACCCTTTTTATCGTTCTAG
Upstream 100 bases:
>100_bases CTGGCTAAAGAAGCAGGTTTTCGGAACGCAATTCACTACGGCATCGTCGGCGATATGATGGGTGTACTAGTGGCTACCAA GTGACGGGGATAGGGGACAC
Downstream 100 bases:
>100_bases TCGCCAGCCTTGGCCACACAGGTTTTCTTAGAATTTTTCCGATCAGCAGTCGAGATTCACGCTATGATACTTTTGCTAAT CACTTTTGGAGAGGTGGCAG
Product: serine/threonine protein phosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MGQRRICIGDVHGHYDTLMALLELVAPGTEDAVYFLGDLIDRGPKSADIIEFVRRSSYQSLLGNHEMMMLEAIANDGSVQ QETFIAWYHSGGANTLQSYNHRIPAEHLQWLRQRPTHLDLGDVWLVHAGLSPHLPIEQQGAEQFCWVRSEFHSMTQPYFA NKLIIVGHTITFTFPGVQPGQVVQGPGWLDIDTGVYHTKSGWLTAFDIDQRQIYQVNSHTAEKRQLPLDAIAVTPFLSF
Sequences:
>Translated_239_residues MGQRRICIGDVHGHYDTLMALLELVAPGTEDAVYFLGDLIDRGPKSADIIEFVRRSSYQSLLGNHEMMMLEAIANDGSVQ QETFIAWYHSGGANTLQSYNHRIPAEHLQWLRQRPTHLDLGDVWLVHAGLSPHLPIEQQGAEQFCWVRSEFHSMTQPYFA NKLIIVGHTITFTFPGVQPGQVVQGPGWLDIDTGVYHTKSGWLTAFDIDQRQIYQVNSHTAEKRQLPLDAIAVTPFLSF >Mature_238_residues GQRRICIGDVHGHYDTLMALLELVAPGTEDAVYFLGDLIDRGPKSADIIEFVRRSSYQSLLGNHEMMMLEAIANDGSVQQ ETFIAWYHSGGANTLQSYNHRIPAEHLQWLRQRPTHLDLGDVWLVHAGLSPHLPIEQQGAEQFCWVRSEFHSMTQPYFAN KLIIVGHTITFTFPGVQPGQVVQGPGWLDIDTGVYHTKSGWLTAFDIDQRQIYQVNSHTAEKRQLPLDAIAVTPFLSF
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=163, Percent_Identity=30.6748466257669, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 26981; Mature: 26850
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQRRICIGDVHGHYDTLMALLELVAPGTEDAVYFLGDLIDRGPKSADIIEFVRRSSYQS CCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LLGNHEMMMLEAIANDGSVQQETFIAWYHSGGANTLQSYNHRIPAEHLQWLRQRPTHLDL HHCCCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCCC GDVWLVHAGLSPHLPIEQQGAEQFCWVRSEFHSMTQPYFANKLIIVGHTITFTFPGVQPG CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCEEEEEEEEEEEEECCCCCC QVVQGPGWLDIDTGVYHTKSGWLTAFDIDQRQIYQVNSHTAEKRQLPLDAIAVTPFLSF CEECCCCEEEECCCEEECCCCCEEEEECCCHHEEEECCCCCHHHCCCHHHHHHCCCCCC >Mature Secondary Structure GQRRICIGDVHGHYDTLMALLELVAPGTEDAVYFLGDLIDRGPKSADIIEFVRRSSYQS CCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LLGNHEMMMLEAIANDGSVQQETFIAWYHSGGANTLQSYNHRIPAEHLQWLRQRPTHLDL HHCCCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCCC GDVWLVHAGLSPHLPIEQQGAEQFCWVRSEFHSMTQPYFANKLIIVGHTITFTFPGVQPG CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCEEEEEEEEEEEEECCCCCC QVVQGPGWLDIDTGVYHTKSGWLTAFDIDQRQIYQVNSHTAEKRQLPLDAIAVTPFLSF CEECCCCEEEECCCEEECCCCCEEEEECCCHHEEEECCCCCHHHCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA