| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077719
Identifier: 170077719
GI number: 170077719
Start: 1128676
End: 1129026
Strand: Reverse
Name: 170077719
Synonym: SYNPCC7002_A1099
Alternate gene names: NA
Gene position: 1129026-1128676 (Counterclockwise)
Preceding gene: 170077724
Following gene: 170077718
Centisome position: 37.53
GC content: 52.99
Gene sequence:
>351_bases ATGTCCCAAACCACGACAGAACCTTTTAAACCCCAGCAGATTGTTTGCTTAGCCGCTGGCGATCGCCGCTTATATGGTGC TGTTATTCAATTTATTGAAGCCCAGGCTAGCTATTGGCTACGGCCGCTGTGTTTGTTGAACGCAACCGCCGAGGCCCCGA CCCCCCTCCACCGCAGCGCCGATATCATTATTGCCGCCCCAAAAATTCGTGCCGCCTTGGATACTGAAATTCTCGATTGC TGGTCAGTGCTCTATGATGACTCCGGGGACTATGGCGACAATGTGGCTGGTCGCAAACTGGTGCAAGATTTTCTGCGTAG TCTGGATTGGGGTAAGGCCACCCAAGGATAG
Upstream 100 bases:
>100_bases TTGCGAAAAAAATGAGGCGATCGCCTTAAACTGGGGAACTAGATTGTCAATTTTTTCCACCCCGATTATTCAATCATTGA ACTTGCCCCTGGAACTGCTA
Downstream 100 bases:
>100_bases CTGGCTCAAAAAATTAATTCGCTTTTGCGGTGTTGACGACAATACCATCGCGCCAAAAAAGTATGTCAAAATCCTAGGGA GTTTTCCTTGGGGTTGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSQTTTEPFKPQQIVCLAAGDRRLYGAVIQFIEAQASYWLRPLCLLNATAEAPTPLHRSADIIIAAPKIRAALDTEILDC WSVLYDDSGDYGDNVAGRKLVQDFLRSLDWGKATQG
Sequences:
>Translated_116_residues MSQTTTEPFKPQQIVCLAAGDRRLYGAVIQFIEAQASYWLRPLCLLNATAEAPTPLHRSADIIIAAPKIRAALDTEILDC WSVLYDDSGDYGDNVAGRKLVQDFLRSLDWGKATQG >Mature_115_residues SQTTTEPFKPQQIVCLAAGDRRLYGAVIQFIEAQASYWLRPLCLLNATAEAPTPLHRSADIIIAAPKIRAALDTEILDCW SVLYDDSGDYGDNVAGRKLVQDFLRSLDWGKATQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12798; Mature: 12666
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTTTEPFKPQQIVCLAAGDRRLYGAVIQFIEAQASYWLRPLCLLNATAEAPTPLHRSA CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC DIIIAAPKIRAALDTEILDCWSVLYDDSGDYGDNVAGRKLVQDFLRSLDWGKATQG CEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SQTTTEPFKPQQIVCLAAGDRRLYGAVIQFIEAQASYWLRPLCLLNATAEAPTPLHRSA CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC DIIIAAPKIRAALDTEILDCWSVLYDDSGDYGDNVAGRKLVQDFLRSLDWGKATQG CEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA