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The map label for this gene is 170077717

Identifier: 170077717

GI number: 170077717

Start: 1126612

End: 1127079

Strand: Reverse

Name: 170077717

Synonym: SYNPCC7002_A1097

Alternate gene names: NA

Gene position: 1127079-1126612 (Counterclockwise)

Preceding gene: 170077718

Following gene: 170077714

Centisome position: 37.47

GC content: 51.71

Gene sequence:

>468_bases
ATGGAACGCCGTCAATTTGTAGGTTTATTCGGTTTAGGTTTACTTGCGAGTTCTTTCCCGACGATTTTAGCCGCCTGTTC
TGGTGGCTCGGAATCAACAGCAGTCAGTGAAGCAGAAGATGCCGCAGCCAACGATGGGGCGATCGCTGAAGCAGAAGATG
CCGCGAGCCTTGTGGCCGATTTCACCGCTGTGGGGAGTCTCGATGCCAATGGCGAACTTTCCACAGAGGTCAATGGACAG
AAAGTCTATGTTTTCCGCAATCCTAATGACCAAAGCCTGGTGGCCGTCGATCCCACCTGTAACCATCGGGGCTGTCCTGT
AAAATTGGCCGATGCTGACCTGGTTTGTGATTGCCATGGTTCACGGTTTGCCTTGGATGGTGAATTGCTTCAGGGGCCAG
CCACCGCCGGTTTATCTCGCTACGAAGTCCGCCAAGAAGGTGAGAATATTTTTGTTAAAGTAGCCTAA

Upstream 100 bases:

>100_bases
TCTCCGCCATTTTCACGAAATCTCCATTAATCCGAAAAACGCCTTTCAAATTCGTTATAACAGTCAAGACATCATTTTCG
ACATCCCTTGAGAAACAATT

Downstream 100 bases:

>100_bases
TTTTTCGTTTCCTGACCGGGAACATAATATTGCACTTGATGGGTCGTCATTGTTTGTCGGGGGCGGGCATTTGGTGCATA
CAGAGCTTGGTAATATTCGA

Product: cytochrome b6/f complex, alternative iron-sulfur subunit

Products: NA

Alternate protein names: Short Rieske Iron Sulfur Protein; Cytochrome B6/F Complex AlteRNAtive Iron-Sulfur Subunit; Cytochrome B6/F-Complex Iron-Sulfur Protein; Cytochrome B6/F Complex Iron-Sulfur Subunit; Rieske Iron-Sulfur Domain-Containing Protein

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MERRQFVGLFGLGLLASSFPTILAACSGGSESTAVSEAEDAAANDGAIAEAEDAASLVADFTAVGSLDANGELSTEVNGQ
KVYVFRNPNDQSLVAVDPTCNHRGCPVKLADADLVCDCHGSRFALDGELLQGPATAGLSRYEVRQEGENIFVKVA

Sequences:

>Translated_155_residues
MERRQFVGLFGLGLLASSFPTILAACSGGSESTAVSEAEDAAANDGAIAEAEDAASLVADFTAVGSLDANGELSTEVNGQ
KVYVFRNPNDQSLVAVDPTCNHRGCPVKLADADLVCDCHGSRFALDGELLQGPATAGLSRYEVRQEGENIFVKVA
>Mature_155_residues
MERRQFVGLFGLGLLASSFPTILAACSGGSESTAVSEAEDAAANDGAIAEAEDAASLVADFTAVGSLDANGELSTEVNGQ
KVYVFRNPNDQSLVAVDPTCNHRGCPVKLADADLVCDCHGSRFALDGELLQGPATAGLSRYEVRQEGENIFVKVA

Specific function: Unknown

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16081; Mature: 16081

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRQFVGLFGLGLLASSFPTILAACSGGSESTAVSEAEDAAANDGAIAEAEDAASLVAD
CCCHHEEHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHH
FTAVGSLDANGELSTEVNGQKVYVFRNPNDQSLVAVDPTCNHRGCPVKLADADLVCDCHG
HHHHCCCCCCCCEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCEEEECCCCEEEECCC
SRFALDGELLQGPATAGLSRYEVRQEGENIFVKVA
CEEEECCHHCCCCCCCCCHHHHHHCCCCEEEEEEC
>Mature Secondary Structure
MERRQFVGLFGLGLLASSFPTILAACSGGSESTAVSEAEDAAANDGAIAEAEDAASLVAD
CCCHHEEHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHH
FTAVGSLDANGELSTEVNGQKVYVFRNPNDQSLVAVDPTCNHRGCPVKLADADLVCDCHG
HHHHCCCCCCCCEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCEEEECCCCEEEECCC
SRFALDGELLQGPATAGLSRYEVRQEGENIFVKVA
CEEEECCHHCCCCCCCCCHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA