| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is crp [C]
Identifier: 170077697
GI number: 170077697
Start: 1107536
End: 1107910
Strand: Direct
Name: crp [C]
Synonym: SYNPCC7002_A1077
Alternate gene names: 170077697
Gene position: 1107536-1107910 (Clockwise)
Preceding gene: 170077696
Following gene: 170077699
Centisome position: 36.82
GC content: 51.2
Gene sequence:
>375_bases ATGATGGCGCATTTTGACTTATTTAGACATGACCACGACACCCAAGATTTCGCGGCGGGCACTGTAATTTTTAGCGCAGG CACCCCGGGCGATCTGCTCTACATTATCCAAACCGGGGAAGTGGAAATTCAGTTTCAAGGGCAACCCTTGAGTATCCTCG GTGAAGGGGAAGCTTTAGGAGAAATGGCCGTCATTGAGCCGGGTTCCCCCCGCAGTGCGACGGCGATCGCCAAAACGGAT TGTCGCCTCGTGGTGATTGACCAAAAGCGATTTACGTTTCTCATCCAGCAAAATCCCTACTTTGCCATCGAAATCATGAA AACCTTAGCCGAGCGTTTAAGTCGCACGAACCAAAAGCTAGAGGCCCAGGGTTAG
Upstream 100 bases:
>100_bases AATACGCAAAAAAGCGGTCTTAGCTCCACTATGATCGTGAATAGGCGGGCATTGGCTCGTTTTTAGAAATTTATTTCGAG AGTTCAGAAGGAACTAAATC
Downstream 100 bases:
>100_bases GGACAGTCGTTAACAAAAGTGCCTTGCGGTTGGATCTCGCTGAGAAGATTCATTGGGAAAAGACGCTTAAATTCATCCCC TGGGAAATGGCAGATCAGGG
Product: cyclic nucleotide-binding domain-containing protein
Products: NA
Alternate protein names: Crp/Fnr Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Transcriptional Regulatory Protein; Regulator Of K+ Conductance; Histidine Kinase; Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Catabolite Gene Activator; Signal Transduction Protein
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MMAHFDLFRHDHDTQDFAAGTVIFSAGTPGDLLYIIQTGEVEIQFQGQPLSILGEGEALGEMAVIEPGSPRSATAIAKTD CRLVVIDQKRFTFLIQQNPYFAIEIMKTLAERLSRTNQKLEAQG
Sequences:
>Translated_124_residues MMAHFDLFRHDHDTQDFAAGTVIFSAGTPGDLLYIIQTGEVEIQFQGQPLSILGEGEALGEMAVIEPGSPRSATAIAKTD CRLVVIDQKRFTFLIQQNPYFAIEIMKTLAERLSRTNQKLEAQG >Mature_124_residues MMAHFDLFRHDHDTQDFAAGTVIFSAGTPGDLLYIIQTGEVEIQFQGQPLSILGEGEALGEMAVIEPGSPRSATAIAKTD CRLVVIDQKRFTFLIQQNPYFAIEIMKTLAERLSRTNQKLEAQG
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789756, Length=118, Percent_Identity=30.5084745762712, Blast_Score=59, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13728; Mature: 13728
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAHFDLFRHDHDTQDFAAGTVIFSAGTPGDLLYIIQTGEVEIQFQGQPLSILGEGEALG CCCCCCHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEECCCCEEEEECCCCCC EMAVIEPGSPRSATAIAKTDCRLVVIDQKRFTFLIQQNPYFAIEIMKTLAERLSRTNQKL CEEEECCCCCCCCEEEEECCCEEEEECCCEEEEEEECCCEEEHHHHHHHHHHHHHCCCEE EAQG ECCC >Mature Secondary Structure MMAHFDLFRHDHDTQDFAAGTVIFSAGTPGDLLYIIQTGEVEIQFQGQPLSILGEGEALG CCCCCCHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEECCCCEEEEECCCCCC EMAVIEPGSPRSATAIAKTDCRLVVIDQKRFTFLIQQNPYFAIEIMKTLAERLSRTNQKL CEEEECCCCCCCCEEEEECCCEEEEECCCEEEEEEECCCEEEHHHHHHHHHHHHHCCCEE EAQG ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA