| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077695
Identifier: 170077695
GI number: 170077695
Start: 1105424
End: 1106014
Strand: Direct
Name: 170077695
Synonym: SYNPCC7002_A1075
Alternate gene names: NA
Gene position: 1105424-1106014 (Clockwise)
Preceding gene: 170077694
Following gene: 170077696
Centisome position: 36.75
GC content: 53.47
Gene sequence:
>591_bases ATGCGCCCTAGTCTCCAAGCCGTTCCTACCCCTGCGTCTTTTGCGGATTTGCCCCTGGCCCAGCCCCCCGATGGTCAGCA GCTAGAGAATATTAAAAGTCATCTGGACTTGGTCTTATTGGCGTTGGAGTCCTTAGCGGGCCTGAGTTCAGAAGCGATGT TACAGGCGGCCAAAGAGCTAAATTTAGAGGCAGTCATCGGCGATCGCGTTACCTTATGGCGACTGCGACAGTCCAACCCC CTCCGGAAAAGTAGTGGGGGCCGCAAAAAATTAGACGTCGAAGAAGCCCGCTCTTTGGTGTTGATCATTTGCCATTTAGC CCGCCAACAGCAGGATGACATTCGCCGCGCCTGCGCTCTCCTGGAACAGATGACCGAACAAGGCCAGGAACCCCACCGAG CCGCCCTTTTAGGGGATTACCTCGATAACTTTAGCAATACCTACCAAGAACGCATGGAGGAAGGGGAGGCGATCGCCTCG GCCTCTTTAGTGGGACTCGCCCTGAAATTACTGATTGATTTGCTGTTCTATGGGGCCAAAAATGGACATCGACGCCTCTG GTTAGCATTAATCGATCAAGGCAAAACCTAG
Upstream 100 bases:
>100_bases TAATATTGGGGATATGTTGCCCATCACGGGGTTGCCACAAGGGAGTTGCAAAATCTGTAACCCAACGCTGGTCTCTATTT TTCTCACCTAAGCTGTAACT
Downstream 100 bases:
>100_bases AGACTTGACCTAAACTCCACCCTTGATTTTTTCTCTTTTTCACTCAATTCCCTCGTAGTTTGTTTTCGTTCTTAGATGGT TCCTATGCTCTCTCCCACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MRPSLQAVPTPASFADLPLAQPPDGQQLENIKSHLDLVLLALESLAGLSSEAMLQAAKELNLEAVIGDRVTLWRLRQSNP LRKSSGGRKKLDVEEARSLVLIICHLARQQQDDIRRACALLEQMTEQGQEPHRAALLGDYLDNFSNTYQERMEEGEAIAS ASLVGLALKLLIDLLFYGAKNGHRRLWLALIDQGKT
Sequences:
>Translated_196_residues MRPSLQAVPTPASFADLPLAQPPDGQQLENIKSHLDLVLLALESLAGLSSEAMLQAAKELNLEAVIGDRVTLWRLRQSNP LRKSSGGRKKLDVEEARSLVLIICHLARQQQDDIRRACALLEQMTEQGQEPHRAALLGDYLDNFSNTYQERMEEGEAIAS ASLVGLALKLLIDLLFYGAKNGHRRLWLALIDQGKT >Mature_196_residues MRPSLQAVPTPASFADLPLAQPPDGQQLENIKSHLDLVLLALESLAGLSSEAMLQAAKELNLEAVIGDRVTLWRLRQSNP LRKSSGGRKKLDVEEARSLVLIICHLARQQQDDIRRACALLEQMTEQGQEPHRAALLGDYLDNFSNTYQERMEEGEAIAS ASLVGLALKLLIDLLFYGAKNGHRRLWLALIDQGKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21701; Mature: 21701
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPSLQAVPTPASFADLPLAQPPDGQQLENIKSHLDLVLLALESLAGLSSEAMLQAAKEL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC NLEAVIGDRVTLWRLRQSNPLRKSSGGRKKLDVEEARSLVLIICHLARQQQDDIRRACAL CHHHEECCCHHEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH LEQMTEQGQEPHRAALLGDYLDNFSNTYQERMEEGEAIASASLVGLALKLLIDLLFYGAK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NGHRRLWLALIDQGKT CCCCEEHHEECCCCCC >Mature Secondary Structure MRPSLQAVPTPASFADLPLAQPPDGQQLENIKSHLDLVLLALESLAGLSSEAMLQAAKEL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC NLEAVIGDRVTLWRLRQSNPLRKSSGGRKKLDVEEARSLVLIICHLARQQQDDIRRACAL CHHHEECCCHHEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH LEQMTEQGQEPHRAALLGDYLDNFSNTYQERMEEGEAIASASLVGLALKLLIDLLFYGAK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NGHRRLWLALIDQGKT CCCCEEHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA