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The map label for this gene is amt [C]

Identifier: 170077690

GI number: 170077690

Start: 1096636

End: 1098366

Strand: Direct

Name: amt [C]

Synonym: SYNPCC7002_A1070

Alternate gene names: 170077690

Gene position: 1096636-1098366 (Clockwise)

Preceding gene: 170077689

Following gene: 170077691

Centisome position: 36.46

GC content: 53.5

Gene sequence:

>1731_bases
ATGATTGATCAACTGTGGTTGCTAATTTGTGCTGGTTTGGTGCTGTTGATGCAAGCTGGCTTTATGTGCCTCGAATCTGG
CCTGACCCGCACAAAAAATAACATTAATGTGGCTGTTAAAAACCTCTCCGATTTTGGTCTGTCGGTGATGCTGTTCTGGG
GAATTGGCTATGGTCTGATGTTTGGGTTATCTCAGTGGGGGGGGATCGGTGGAAGCAATTTCTTTTTGGGCACGACTGGG
AACCCCGAAGAGGCAGCTTTTTTCCTATTTCAGGCAATGTTTTGCGGTACGGCCACAACGATTATTTCGGGGGCGATCGC
CGAACGCCTCAAGTTTGAAGCCTACATCATCATTGTGATCCTGGTGTCGGGGTTTATCTATCCGGTTTTTGGACATTGGG
CCTGGAACGAAGCGGGCTGGTTGCGACAACTGGGGTTTCTGGATTTTGCGGGCAGTACGGTGGTGCATAGCATGGGGGCT
TGGGTGAGCCTGGGCACCTTGCTTTTAGTCGGAGCTAGGGAAGGGCGATTTACCCCCACGGGAACCCAAAAAATCCAAGG
ATCGAACTTGCCCTTTGCCGTTTTGGGGGCGTTGCTGTTGTGGGTGGGCTGGCTGGGATTTAACGGGGGAAGTACCTTCG
TTTTTAATGACCAAGTGCCCCAAATTATTACGAATACAGTACTGGCGGGGACTGCGGGGATGGTGACGGCGATGCTCCTC
AGCCAATGTTACCTCAAGCGCTCGGAGGTCGAGGAAATTATCAATGGTTCCCTGGCGGGGCTGGTGGCAGTTACGGCCTG
TTGTGATCTGGTGTCGAGCCCTTTGGCGGTGGTGGTGGGGATAACGGCGGCTGGAGTAGCCCGGTGGGTGTCGAGTCTTT
TAAAGCGCTACAAAATTGATGATGCGGTGGATGCGATCGCCGTCCATGGGGGCGCGGGACTGTGGGGAACCCTCTGTGTC
GGGTTATTTGGCAATGTCGAAGCCCGCCATAGTCAACTGCTAGTACAACTCTTGGGGGTGGCGATCGCCCTTGCTTGGGG
GACGGGGCTGACTTGGCTAATTTTGCAACTGTTGCAGCGGTGGTATCCCTTGCGGGTTTCCCCGGAAGCCGAAGCCCTGG
GTTTGAATATTTCTGAACATGGGGCCAAAACCGATGCCTACGAACTGTTTCAGGTGATGGATCACCAGGCCGCGACCCAA
GACTTGACCCTGCGGGTGCCCGTGGAACCCTTTACAGAAATTGGCCACATTGCCACCCGTTATAACCAAGTGATCGACGC
CCTCGAACAAAATCACCGGGAAAATGCCGAATCCCTAGAGGAACTCTACACAATCACCGCGATGGCCGTGGCCGCCATTG
AGCACCAAAATTTTGACCCCGATTTGTTTGCCAGTTTTGGCGATCGCCCCGATGAATTGGGCATTTTAGGCCGCTCCCTC
CAACAGTTGCTCCAGACCATTAACCAGCAAACAGCGGCCCTCGAACAACTACAGCAGCAACAACAAACGACCCTAAAGGC
TGTGCTCGGAGAAATTTTTCAGCAGCGGTTTGGGGAGCCGAGTCTCACCTATCAAGGACAATTACCCGATTTGCCCTCGG
CGCTGACCATGGCCGAAATTACCCACATGGCGATCGCCACCACCAGCTTTGGGCAATTTTTAACACAAGTGCAGGCTACC
AACATTGCCTCTGGAGAAAATCAGCCAGTTGCGGCAGATTGGAACGATTGA

Upstream 100 bases:

>100_bases
CCCGGTTTTATCAATTATTCCAGCCTAAATAAGTTTTTTCCCTCAGCAAAATTAATTTAATCTCGATGAATTATCCGTTC
CTAAGGAAACCCATTACTTT

Downstream 100 bases:

>100_bases
AAATATAAATTCACCAAGTCCTGAAACATTGACAAAGCCTCTACCCCTGGGCCTGCCTTTTTCCGGGAAAATTAAACCAT
AGGTCTTTTCGGAGAATTGT

Product: ammonium transporter, putative

Products: NH3 [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MIDQLWLLICAGLVLLMQAGFMCLESGLTRTKNNINVAVKNLSDFGLSVMLFWGIGYGLMFGLSQWGGIGGSNFFLGTTG
NPEEAAFFLFQAMFCGTATTIISGAIAERLKFEAYIIIVILVSGFIYPVFGHWAWNEAGWLRQLGFLDFAGSTVVHSMGA
WVSLGTLLLVGAREGRFTPTGTQKIQGSNLPFAVLGALLLWVGWLGFNGGSTFVFNDQVPQIITNTVLAGTAGMVTAMLL
SQCYLKRSEVEEIINGSLAGLVAVTACCDLVSSPLAVVVGITAAGVARWVSSLLKRYKIDDAVDAIAVHGGAGLWGTLCV
GLFGNVEARHSQLLVQLLGVAIALAWGTGLTWLILQLLQRWYPLRVSPEAEALGLNISEHGAKTDAYELFQVMDHQAATQ
DLTLRVPVEPFTEIGHIATRYNQVIDALEQNHRENAESLEELYTITAMAVAAIEHQNFDPDLFASFGDRPDELGILGRSL
QQLLQTINQQTAALEQLQQQQQTTLKAVLGEIFQQRFGEPSLTYQGQLPDLPSALTMAEITHMAIATTSFGQFLTQVQAT
NIASGENQPVAADWND

Sequences:

>Translated_576_residues
MIDQLWLLICAGLVLLMQAGFMCLESGLTRTKNNINVAVKNLSDFGLSVMLFWGIGYGLMFGLSQWGGIGGSNFFLGTTG
NPEEAAFFLFQAMFCGTATTIISGAIAERLKFEAYIIIVILVSGFIYPVFGHWAWNEAGWLRQLGFLDFAGSTVVHSMGA
WVSLGTLLLVGAREGRFTPTGTQKIQGSNLPFAVLGALLLWVGWLGFNGGSTFVFNDQVPQIITNTVLAGTAGMVTAMLL
SQCYLKRSEVEEIINGSLAGLVAVTACCDLVSSPLAVVVGITAAGVARWVSSLLKRYKIDDAVDAIAVHGGAGLWGTLCV
GLFGNVEARHSQLLVQLLGVAIALAWGTGLTWLILQLLQRWYPLRVSPEAEALGLNISEHGAKTDAYELFQVMDHQAATQ
DLTLRVPVEPFTEIGHIATRYNQVIDALEQNHRENAESLEELYTITAMAVAAIEHQNFDPDLFASFGDRPDELGILGRSL
QQLLQTINQQTAALEQLQQQQQTTLKAVLGEIFQQRFGEPSLTYQGQLPDLPSALTMAEITHMAIATTSFGQFLTQVQAT
NIASGENQPVAADWND
>Mature_576_residues
MIDQLWLLICAGLVLLMQAGFMCLESGLTRTKNNINVAVKNLSDFGLSVMLFWGIGYGLMFGLSQWGGIGGSNFFLGTTG
NPEEAAFFLFQAMFCGTATTIISGAIAERLKFEAYIIIVILVSGFIYPVFGHWAWNEAGWLRQLGFLDFAGSTVVHSMGA
WVSLGTLLLVGAREGRFTPTGTQKIQGSNLPFAVLGALLLWVGWLGFNGGSTFVFNDQVPQIITNTVLAGTAGMVTAMLL
SQCYLKRSEVEEIINGSLAGLVAVTACCDLVSSPLAVVVGITAAGVARWVSSLLKRYKIDDAVDAIAVHGGAGLWGTLCV
GLFGNVEARHSQLLVQLLGVAIALAWGTGLTWLILQLLQRWYPLRVSPEAEALGLNISEHGAKTDAYELFQVMDHQAATQ
DLTLRVPVEPFTEIGHIATRYNQVIDALEQNHRENAESLEELYTITAMAVAAIEHQNFDPDLFASFGDRPDELGILGRSL
QQLLQTINQQTAALEQLQQQQQTTLKAVLGEIFQQRFGEPSLTYQGQLPDLPSALTMAEITHMAIATTSFGQFLTQVQAT
NIASGENQPVAADWND

Specific function: Involved In The Uptake Of Ammonia (Probable). [C]

COG id: COG0004

COG function: function code P; Ammonia permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ammonium transporter (TC 2.A.49) family [H]

Homologues:

Organism=Escherichia coli, GI1786656, Length=413, Percent_Identity=31.2348668280872, Blast_Score=152, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17550182, Length=417, Percent_Identity=33.8129496402878, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17550180, Length=420, Percent_Identity=33.3333333333333, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI32564042, Length=417, Percent_Identity=31.6546762589928, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI133931100, Length=341, Percent_Identity=30.2052785923754, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17563228, Length=322, Percent_Identity=25.776397515528, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324187, Length=411, Percent_Identity=27.7372262773723, Blast_Score=134, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6321559, Length=444, Percent_Identity=26.5765765765766, Blast_Score=118, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6325396, Length=417, Percent_Identity=27.0983213429257, Blast_Score=116, Evalue=8e-27,
Organism=Drosophila melanogaster, GI161078314, Length=435, Percent_Identity=31.4942528735632, Blast_Score=184, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001905
- InterPro:   IPR018047
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00909 Ammonium_transp [H]

EC number: NA

Molecular weight: Translated: 62340; Mature: 62340

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS01219 AMMONIUM_TRANSP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDQLWLLICAGLVLLMQAGFMCLESGLTRTKNNINVAVKNLSDFGLSVMLFWGIGYGLM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH
FGLSQWGGIGGSNFFLGTTGNPEEAAFFLFQAMFCGTATTIISGAIAERLKFEAYIIIVI
HHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSGFIYPVFGHWAWNEAGWLRQLGFLDFAGSTVVHSMGAWVSLGTLLLVGAREGRFTPT
HHHHHHHHHHCCCCCCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCC
GTQKIQGSNLPFAVLGALLLWVGWLGFNGGSTFVFNDQVPQIITNTVLAGTAGMVTAMLL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHH
SQCYLKRSEVEEIINGSLAGLVAVTACCDLVSSPLAVVVGITAAGVARWVSSLLKRYKID
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
DAVDAIAVHGGAGLWGTLCVGLFGNVEARHSQLLVQLLGVAIALAWGTGLTWLILQLLQR
HHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
WYPLRVSPEAEALGLNISEHGAKTDAYELFQVMDHQAATQDLTLRVPVEPFTEIGHIATR
HCCCCCCCCCHHHCCCCHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
YNQVIDALEQNHRENAESLEELYTITAMAVAAIEHQNFDPDLFASFGDRPDELGILGRSL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHH
QQLLQTINQQTAALEQLQQQQQTTLKAVLGEIFQQRFGEPSLTYQGQLPDLPSALTMAEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHH
THMAIATTSFGQFLTQVQATNIASGENQPVAADWND
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDQLWLLICAGLVLLMQAGFMCLESGLTRTKNNINVAVKNLSDFGLSVMLFWGIGYGLM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH
FGLSQWGGIGGSNFFLGTTGNPEEAAFFLFQAMFCGTATTIISGAIAERLKFEAYIIIVI
HHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSGFIYPVFGHWAWNEAGWLRQLGFLDFAGSTVVHSMGAWVSLGTLLLVGAREGRFTPT
HHHHHHHHHHCCCCCCCCHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCC
GTQKIQGSNLPFAVLGALLLWVGWLGFNGGSTFVFNDQVPQIITNTVLAGTAGMVTAMLL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHH
SQCYLKRSEVEEIINGSLAGLVAVTACCDLVSSPLAVVVGITAAGVARWVSSLLKRYKID
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
DAVDAIAVHGGAGLWGTLCVGLFGNVEARHSQLLVQLLGVAIALAWGTGLTWLILQLLQR
HHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
WYPLRVSPEAEALGLNISEHGAKTDAYELFQVMDHQAATQDLTLRVPVEPFTEIGHIATR
HCCCCCCCCCHHHCCCCHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
YNQVIDALEQNHRENAESLEELYTITAMAVAAIEHQNFDPDLFASFGDRPDELGILGRSL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHH
QQLLQTINQQTAALEQLQQQQQTTLKAVLGEIFQQRFGEPSLTYQGQLPDLPSALTMAEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHH
THMAIATTSFGQFLTQVQATNIASGENQPVAADWND
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NH3 [Periplasm] [C]

Specific reaction: NH3 [Periplasm] = NH3 [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]