| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077688
Identifier: 170077688
GI number: 170077688
Start: 1093299
End: 1095071
Strand: Direct
Name: 170077688
Synonym: SYNPCC7002_A1068
Alternate gene names: NA
Gene position: 1093299-1095071 (Clockwise)
Preceding gene: 170077687
Following gene: 170077689
Centisome position: 36.35
GC content: 39.88
Gene sequence:
>1773_bases ATGAATGTAAAAAAACTAAGCCTATATCTTTTCTCTATCAATTTAGTGACTAGTTTTTTTGCTGTGGCTGCAGCAGATGA AGTCAACGAATCTCTGATAGGAACTTCTACAGATACCAATGCTTTCGACTTAGAAAATAGTGCTCAGATACTGATTTCAG ATATTGTTGAGCAGGAAGATGCCGATACTCAAGAAGCAACAGTCACAGGGAATCGAGTCATTGAATATTCGACCAGTCCT TTCGAGGCTAATTTTTTAGAGCCTGCAACTATAGAATCAGCAACTACATTGCCTTCAGGCGTTCTTGATCTTAGTTCTGG ATTTATTGTCTATCCTACCAATTCAGAATCCACTGGTGTGGGGTTACAAGTATATTATGGTTCTATTGAGTATGGTGTTA CGGACAGGTTACAAATAGGTGCGAATGTCTCATTTTTTGATGATGTTTTAGGTGATAGATTTAATGGAGAAAGAACTAAT CTAACTTTTTCATCTGTAGCACCAAATGTTAAATACAAGCTGATCGAAGAGCCTTCCTATAGTCTTGGGATTGTTGGTTC ACTTGAATGGATACAAGTCCGTTCCGAAAATGGTTTATTCAGTGAACAAGGTACTTCTGCCCGCCAAAAAGATAATGTTC TGGCTGGTACCATTCAATTACCAGTGACATATAATATCTCCGAAAATGCTCAGTGGCATGCAGTGGCTGGAGCGACGATT TTCCCTGAGACCGTTAATGGGGGAGATTTCTACGGTACTTTCTTTAATGTTGGTACAGGGATAACTCTTCAATTAAGCGA AAGATTTGGTTTGCTAGCGGACATTAATTTTCCGATTGGCTCTTCTGGCGGCAATAGCGTCAATACAGACGGTAGTATTA GCGAAAAAGTGGTTTGGAATGCTGGTTTTAGTTATTTGCATAGTCCGAACCTCGCCTTGGATTTTTCAGTGACCAACCGG CTAGGCACCACGCCAGCAACTAAGTTACTAACTTTTCTGCCCAATGGTGATGAAGTAGGAGCTTTATTTAAGCTTAGATA TACACCTGATCTTGCTCAAACCTATCGGGGGAACTTTGGAGATAATCCTTTTCCCCCTATGACGTATCGAGAGAAGCAAT TACTATTTGATGGCATTCTTCTTAGTAGTCCCACCACTGTTCGTAAAGGCATGATTCTTTTGGATGGTGGAATTACTACT GATGGGGACAGTGGTGGCGCACAGCTTAGTTTTGGTCTCAGTGATACCGCTCAAATAGAATTTCTAGCTTCGCAATTAGC AGATAATGATCAGCCGTTACAAAATAATTTTAAATCTGGTGTTGCGACTAAACTTAATTTTTTGAATCAGGCCCAAGGTG ATCCCTTTTCCTTAGGTTCGAGAATTGCACTTGTATTTCAAGATGGTACCGATTCCTTTTTAGGAGATTTATCTTTTGCT TATTCTCCCAATGATACGATTAGTTTTACGTTAAATCCGAAAGTAGCGTTATTTTCTGACGAGAGCATTGTTGGTGCAGG TTTAGGTGTTAATTTACAGCTGTCTCCCGGACTACAGTTAATTGGGGAAGTAACTCCTATGCTTAGTGATGATCCCTTTG TTTGGGCAGCTGGTGCGCGTTATTTATTTCCCAAATCCAATTTTGGTTTAGGAGTTTATGGTACCAACACCTCAGGCAAA GGAAATATTGGTAGCCTAATTCGTCAATCTGATGATAATGTGAGCGTTGGTTTTAATTTAATGTGGTTACTAGGTGGTGG TAGAAGTGATTAA
Upstream 100 bases:
>100_bases ATCTTAGCGGGGACATCAGCGGCCATCATTGACTTCAAAAAAAGATCTGGATATGATTTAAGGCGTTATCATTGTGTGAA TTAATCAATTAGCTGTTGCC
Downstream 100 bases:
>100_bases ACATGTCTTATGAAATCGTCTCTATACTTCTAAAAAAATGACTGATGTCATTCATTTTGAGTTGAAGAAATTGTTTCTGG CAGCCTCGTTTACCCACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MNVKKLSLYLFSINLVTSFFAVAAADEVNESLIGTSTDTNAFDLENSAQILISDIVEQEDADTQEATVTGNRVIEYSTSP FEANFLEPATIESATTLPSGVLDLSSGFIVYPTNSESTGVGLQVYYGSIEYGVTDRLQIGANVSFFDDVLGDRFNGERTN LTFSSVAPNVKYKLIEEPSYSLGIVGSLEWIQVRSENGLFSEQGTSARQKDNVLAGTIQLPVTYNISENAQWHAVAGATI FPETVNGGDFYGTFFNVGTGITLQLSERFGLLADINFPIGSSGGNSVNTDGSISEKVVWNAGFSYLHSPNLALDFSVTNR LGTTPATKLLTFLPNGDEVGALFKLRYTPDLAQTYRGNFGDNPFPPMTYREKQLLFDGILLSSPTTVRKGMILLDGGITT DGDSGGAQLSFGLSDTAQIEFLASQLADNDQPLQNNFKSGVATKLNFLNQAQGDPFSLGSRIALVFQDGTDSFLGDLSFA YSPNDTISFTLNPKVALFSDESIVGAGLGVNLQLSPGLQLIGEVTPMLSDDPFVWAAGARYLFPKSNFGLGVYGTNTSGK GNIGSLIRQSDDNVSVGFNLMWLLGGGRSD
Sequences:
>Translated_590_residues MNVKKLSLYLFSINLVTSFFAVAAADEVNESLIGTSTDTNAFDLENSAQILISDIVEQEDADTQEATVTGNRVIEYSTSP FEANFLEPATIESATTLPSGVLDLSSGFIVYPTNSESTGVGLQVYYGSIEYGVTDRLQIGANVSFFDDVLGDRFNGERTN LTFSSVAPNVKYKLIEEPSYSLGIVGSLEWIQVRSENGLFSEQGTSARQKDNVLAGTIQLPVTYNISENAQWHAVAGATI FPETVNGGDFYGTFFNVGTGITLQLSERFGLLADINFPIGSSGGNSVNTDGSISEKVVWNAGFSYLHSPNLALDFSVTNR LGTTPATKLLTFLPNGDEVGALFKLRYTPDLAQTYRGNFGDNPFPPMTYREKQLLFDGILLSSPTTVRKGMILLDGGITT DGDSGGAQLSFGLSDTAQIEFLASQLADNDQPLQNNFKSGVATKLNFLNQAQGDPFSLGSRIALVFQDGTDSFLGDLSFA YSPNDTISFTLNPKVALFSDESIVGAGLGVNLQLSPGLQLIGEVTPMLSDDPFVWAAGARYLFPKSNFGLGVYGTNTSGK GNIGSLIRQSDDNVSVGFNLMWLLGGGRSD >Mature_590_residues MNVKKLSLYLFSINLVTSFFAVAAADEVNESLIGTSTDTNAFDLENSAQILISDIVEQEDADTQEATVTGNRVIEYSTSP FEANFLEPATIESATTLPSGVLDLSSGFIVYPTNSESTGVGLQVYYGSIEYGVTDRLQIGANVSFFDDVLGDRFNGERTN LTFSSVAPNVKYKLIEEPSYSLGIVGSLEWIQVRSENGLFSEQGTSARQKDNVLAGTIQLPVTYNISENAQWHAVAGATI FPETVNGGDFYGTFFNVGTGITLQLSERFGLLADINFPIGSSGGNSVNTDGSISEKVVWNAGFSYLHSPNLALDFSVTNR LGTTPATKLLTFLPNGDEVGALFKLRYTPDLAQTYRGNFGDNPFPPMTYREKQLLFDGILLSSPTTVRKGMILLDGGITT DGDSGGAQLSFGLSDTAQIEFLASQLADNDQPLQNNFKSGVATKLNFLNQAQGDPFSLGSRIALVFQDGTDSFLGDLSFA YSPNDTISFTLNPKVALFSDESIVGAGLGVNLQLSPGLQLIGEVTPMLSDDPFVWAAGARYLFPKSNFGLGVYGTNTSGK GNIGSLIRQSDDNVSVGFNLMWLLGGGRSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63195; Mature: 63195
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVKKLSLYLFSINLVTSFFAVAAADEVNESLIGTSTDTNAFDLENSAQILISDIVEQED CCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCC ADTQEATVTGNRVIEYSTSPFEANFLEPATIESATTLPSGVLDLSSGFIVYPTNSESTGV CCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCC GLQVYYGSIEYGVTDRLQIGANVSFFDDVLGDRFNGERTNLTFSSVAPNVKYKLIEEPSY EEEEEEEEEEECCCCEEEECCCCHHHHHHHCCCCCCCCCEEEHHHCCCCCEEEEEECCCC SLGIVGSLEWIQVRSENGLFSEQGTSARQKDNVLAGTIQLPVTYNISENAQWHAVAGATI CEEEEECEEEEEEECCCCCCCCCCCCCHHCCCEEEEEEEEEEEEECCCCCEEEEEECCEE FPETVNGGDFYGTFFNVGTGITLQLSERFGLLADINFPIGSSGGNSVNTDGSISEKVVWN CCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE AGFSYLHSPNLALDFSVTNRLGTTPATKLLTFLPNGDEVGALFKLRYTPDLAQTYRGNFG CCCHHHCCCCEEEEEEECCCCCCCCHHHEEEECCCCCCEEEEEEEEECCCHHHHHCCCCC DNPFPPMTYREKQLLFDGILLSSPTTVRKGMILLDGGITTDGDSGGAQLSFGLSDTAQIE CCCCCCCCCCCHHHEEEEEEECCCCHHHCCEEEEECCEECCCCCCCCEEEECCCCCHHHH FLASQLADNDQPLQNNFKSGVATKLNFLNQAQGDPFSLGSRIALVFQDGTDSFLGDLSFA HHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHCEEEE YSPNDTISFTLNPKVALFSDESIVGAGLGVNLQLSPGLQLIGEVTPMLSDDPFVWAAGAR ECCCCEEEEEECCEEEEEECCCEEECCCEEEEEECCCHHHHHHHCCCCCCCCEEEECCCE YLFPKSNFGLGVYGTNTSGKGNIGSLIRQSDDNVSVGFNLMWLLGGGRSD EECCCCCCCEEEEECCCCCCCCHHHHHHCCCCCEEECEEEEEEECCCCCC >Mature Secondary Structure MNVKKLSLYLFSINLVTSFFAVAAADEVNESLIGTSTDTNAFDLENSAQILISDIVEQED CCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCC ADTQEATVTGNRVIEYSTSPFEANFLEPATIESATTLPSGVLDLSSGFIVYPTNSESTGV CCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCC GLQVYYGSIEYGVTDRLQIGANVSFFDDVLGDRFNGERTNLTFSSVAPNVKYKLIEEPSY EEEEEEEEEEECCCCEEEECCCCHHHHHHHCCCCCCCCCEEEHHHCCCCCEEEEEECCCC SLGIVGSLEWIQVRSENGLFSEQGTSARQKDNVLAGTIQLPVTYNISENAQWHAVAGATI CEEEEECEEEEEEECCCCCCCCCCCCCHHCCCEEEEEEEEEEEEECCCCCEEEEEECCEE FPETVNGGDFYGTFFNVGTGITLQLSERFGLLADINFPIGSSGGNSVNTDGSISEKVVWN CCCCCCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE AGFSYLHSPNLALDFSVTNRLGTTPATKLLTFLPNGDEVGALFKLRYTPDLAQTYRGNFG CCCHHHCCCCEEEEEEECCCCCCCCHHHEEEECCCCCCEEEEEEEEECCCHHHHHCCCCC DNPFPPMTYREKQLLFDGILLSSPTTVRKGMILLDGGITTDGDSGGAQLSFGLSDTAQIE CCCCCCCCCCCHHHEEEEEEECCCCHHHCCEEEEECCEECCCCCCCCEEEECCCCCHHHH FLASQLADNDQPLQNNFKSGVATKLNFLNQAQGDPFSLGSRIALVFQDGTDSFLGDLSFA HHHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHCEEEE YSPNDTISFTLNPKVALFSDESIVGAGLGVNLQLSPGLQLIGEVTPMLSDDPFVWAAGAR ECCCCEEEEEECCEEEEEECCCEEECCCEEEEEECCCHHHHHHHCCCCCCCCEEEECCCE YLFPKSNFGLGVYGTNTSGKGNIGSLIRQSDDNVSVGFNLMWLLGGGRSD EECCCCCCCEEEEECCCCCCCCHHHHHHCCCCCEEECEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA