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The map label for this gene is nusG [H]

Identifier: 170077651

GI number: 170077651

Start: 1068671

End: 1069273

Strand: Reverse

Name: nusG [H]

Synonym: SYNPCC7002_A1030

Alternate gene names: 170077651

Gene position: 1069273-1068671 (Counterclockwise)

Preceding gene: 170077652

Following gene: 170077650

Centisome position: 35.55

GC content: 46.43

Gene sequence:

>603_bases
ATGGAACATTCAGAAGAATACACAGGAACGCAAGCTGGACCCAAACCGCGTTGGTATGCCGTCCAAGTTGCATCTGGGTG
CGAACAAAGAGTCAAAGCAAACCTTGAACAACGGATTCATACTCTCGATGTGGCGGATCGGATCTTTCAGGTTCAGATTC
CCCAAACCCCAACCGTCAAAATCCGTAAGGATGGCAGTCGGCAACATGGAGAAGAAAAGGTTTTTCCTGGTTATGTCTTG
ATTCAGATGACCCTAGATGATGAAGCTTGGCAGGTTATCAAAAATACGCCCCATGTGATTAATTTTGTTGGGGCCGAACA
GAAGCGTAGCTACGGTCGGGGACGGGGCCATGTTAAACCCGTGCCTCTCAGTAAGTCTGAAGTAGAGCGCATCTTTAAAC
AAGCTCAGGTTGTTGAACCGACTGTTAAAGTCGATATGGCCATTGGCGACAAAATTCTTGTGCTTTCTGGTCCTTTTAAG
GATTTTGAAGGCGAGATCATTGAAGTCAGCCCTGAGCGCAGCAAACTGAAAGCTCTATTGTCGATCTTTGGTCGAGATAC
GCCAGTAGAACTTGAATTTACTCAAGTGGAAAAACAGAGCTAG

Upstream 100 bases:

>100_bases
CATTTTGATGGTGATTCTTGTTGCGACTGTTATCTACGTCGTAGACAATCTCTTCATTTTCGTTTCAGGTGCTGTATTTT
AAAAGACTCTTTAACTTTCT

Downstream 100 bases:

>100_bases
CGATGGCAAAAAAAGTTGTTACGGTAATTAAATTAGCCTTGCCTGCGGGTAAGGCCAACCCTGCACCTCCTGTTGGGCCA
GCCCTGGGTCAGCATGGGGT

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MEHSEEYTGTQAGPKPRWYAVQVASGCEQRVKANLEQRIHTLDVADRIFQVQIPQTPTVKIRKDGSRQHGEEKVFPGYVL
IQMTLDDEAWQVIKNTPHVINFVGAEQKRSYGRGRGHVKPVPLSKSEVERIFKQAQVVEPTVKVDMAIGDKILVLSGPFK
DFEGEIIEVSPERSKLKALLSIFGRDTPVELEFTQVEKQS

Sequences:

>Translated_200_residues
MEHSEEYTGTQAGPKPRWYAVQVASGCEQRVKANLEQRIHTLDVADRIFQVQIPQTPTVKIRKDGSRQHGEEKVFPGYVL
IQMTLDDEAWQVIKNTPHVINFVGAEQKRSYGRGRGHVKPVPLSKSEVERIFKQAQVVEPTVKVDMAIGDKILVLSGPFK
DFEGEIIEVSPERSKLKALLSIFGRDTPVELEFTQVEKQS
>Mature_200_residues
MEHSEEYTGTQAGPKPRWYAVQVASGCEQRVKANLEQRIHTLDVADRIFQVQIPQTPTVKIRKDGSRQHGEEKVFPGYVL
IQMTLDDEAWQVIKNTPHVINFVGAEQKRSYGRGRGHVKPVPLSKSEVERIFKQAQVVEPTVKVDMAIGDKILVLSGPFK
DFEGEIIEVSPERSKLKALLSIFGRDTPVELEFTQVEKQS

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=188, Percent_Identity=41.4893617021277, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 22622; Mature: 22622

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHSEEYTGTQAGPKPRWYAVQVASGCEQRVKANLEQRIHTLDVADRIFQVQIPQTPTVK
CCCCCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEE
IRKDGSRQHGEEKVFPGYVLIQMTLDDEAWQVIKNTPHVINFVGAEQKRSYGRGRGHVKP
EECCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCC
VPLSKSEVERIFKQAQVVEPTVKVDMAIGDKILVLSGPFKDFEGEIIEVSPERSKLKALL
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCCCEEEECCCHHHHHHHH
SIFGRDTPVELEFTQVEKQS
HHHCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MEHSEEYTGTQAGPKPRWYAVQVASGCEQRVKANLEQRIHTLDVADRIFQVQIPQTPTVK
CCCCCCCCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEE
IRKDGSRQHGEEKVFPGYVLIQMTLDDEAWQVIKNTPHVINFVGAEQKRSYGRGRGHVKP
EECCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCCCC
VPLSKSEVERIFKQAQVVEPTVKVDMAIGDKILVLSGPFKDFEGEIIEVSPERSKLKALL
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCCCEEEECCCHHHHHHHH
SIFGRDTPVELEFTQVEKQS
HHHCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7685084; 8905231; 7505271 [H]