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The map label for this gene is yidC [H]

Identifier: 170077612

GI number: 170077612

Start: 1017282

End: 1018448

Strand: Direct

Name: yidC [H]

Synonym: SYNPCC7002_A0991

Alternate gene names: 170077612

Gene position: 1017282-1018448 (Clockwise)

Preceding gene: 170077611

Following gene: 170077613

Centisome position: 33.82

GC content: 49.44

Gene sequence:

>1167_bases
ATGGATTTTGGGATCGGATTTTTATCAAACAACGTGATGTTGCCAATCCTAGATTTTTTCTATGGCATTGTGCCGAGCTA
CGGCTTTGCAATCATCGCCCTGACCCTTGTGATTCGATTTGCCGTTTATCCCCTAAGCGCCAAATCGATCCGCAGCATGA
GACGCACGAAGATTACCCAGCCCCTAATGCAAAAACGGGTCAAGGAAATCCAAGAGCGCTACAAAAATGACCCGGCAAAG
CAACAAGCCGCGATGTCAGAGGTTTACAAAGAATTTGGGAATCCCCTCGCCGGTTGTTTACCGATTCTGTTGCAGATGCC
CATCCTCTTTGCCCTCTTCGCTACCCTGCGGGGATCGCCATTTGCCAACATCAACTACACCGCTAATCTGCAAATTCTCC
CCAGCGAGAAAATGGAGCAGGTACAGCCCCAGGCGGTCGATGTTAAAACCCAAAATGTTTATTTTGATAGCGGTATCCAT
TACCCAATCACCTTGTCTTTACCCGCTGGGAATAAAGTCGGTGTTGGAGAAACTACCCAATTTGTTCTCCAGAGTGACTC
CGGGAAGGACTTTGCGGCCCTGGCTGCCGAATATCCAGACAGTAACATCAAGCCCAGCTTTGAAGTTACCAAAGGTCAAG
AACGAGTAGAGATTCAACCCGATGGTTCCCTCGTGGCCCTTGCGCCTGGGGATGTCAGCATCCAGGTAACTGTGCCGGGG
ATCGCCGCTGATAAAGGATTTCTCTTCATTGAAGCCCTAGGCCGCATTGGGGTCAATGGTGACGATGGTATCCACTGGGA
TATTCTCGGTATGGTGCTGTTCTTTGGGGTGAGCCTTTACATTAACCAGACTATTTCTGGGGGCGCTCCCAGCAGCAATA
ACAACAGCGGCGGCGATCAACAGCAGCAGGCCCAACAAACGGTGAACAAAATTACGCCGTTGATTTTCTCAGGGATGTTC
TTGTTTTTCCCACTACCGGCTGGGGTGTTGATGTACATGACGATCGCCAACGCGTTCCAAACGGTACAGACGTTCATCCT
TACGAAGGAACCTTTACCAGAAAATCTCCAGAAACTAGTGGATGAACAGGAGAAGTCGGAGAAAGGGCGCGACAAGCTTC
CCTTTGAGCGCAAAGGTAGCAAGAAAAAAGAGAAAACTTCAGGTTAA

Upstream 100 bases:

>100_bases
CATTTCTCCCATCGCTTTTTTAAAAGAAACCATTAAAAATAAGAACTAAACCCGATAAACTAACCCTTAAACAACTCATA
GCTAGACGAACTTCAGACGC

Downstream 100 bases:

>100_bases
GAGCAGATGAACGAGACCAAAATCCAACAGGGTGAAACCTGGCTGGCGACACTGCTTGAGTTGATGGCGCTTCCGGCTCC
GGTTACTGCGGCGGTGAAAC

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MDFGIGFLSNNVMLPILDFFYGIVPSYGFAIIALTLVIRFAVYPLSAKSIRSMRRTKITQPLMQKRVKEIQERYKNDPAK
QQAAMSEVYKEFGNPLAGCLPILLQMPILFALFATLRGSPFANINYTANLQILPSEKMEQVQPQAVDVKTQNVYFDSGIH
YPITLSLPAGNKVGVGETTQFVLQSDSGKDFAALAAEYPDSNIKPSFEVTKGQERVEIQPDGSLVALAPGDVSIQVTVPG
IAADKGFLFIEALGRIGVNGDDGIHWDILGMVLFFGVSLYINQTISGGAPSSNNNSGGDQQQQAQQTVNKITPLIFSGMF
LFFPLPAGVLMYMTIANAFQTVQTFILTKEPLPENLQKLVDEQEKSEKGRDKLPFERKGSKKKEKTSG

Sequences:

>Translated_388_residues
MDFGIGFLSNNVMLPILDFFYGIVPSYGFAIIALTLVIRFAVYPLSAKSIRSMRRTKITQPLMQKRVKEIQERYKNDPAK
QQAAMSEVYKEFGNPLAGCLPILLQMPILFALFATLRGSPFANINYTANLQILPSEKMEQVQPQAVDVKTQNVYFDSGIH
YPITLSLPAGNKVGVGETTQFVLQSDSGKDFAALAAEYPDSNIKPSFEVTKGQERVEIQPDGSLVALAPGDVSIQVTVPG
IAADKGFLFIEALGRIGVNGDDGIHWDILGMVLFFGVSLYINQTISGGAPSSNNNSGGDQQQQAQQTVNKITPLIFSGMF
LFFPLPAGVLMYMTIANAFQTVQTFILTKEPLPENLQKLVDEQEKSEKGRDKLPFERKGSKKKEKTSG
>Mature_388_residues
MDFGIGFLSNNVMLPILDFFYGIVPSYGFAIIALTLVIRFAVYPLSAKSIRSMRRTKITQPLMQKRVKEIQERYKNDPAK
QQAAMSEVYKEFGNPLAGCLPILLQMPILFALFATLRGSPFANINYTANLQILPSEKMEQVQPQAVDVKTQNVYFDSGIH
YPITLSLPAGNKVGVGETTQFVLQSDSGKDFAALAAEYPDSNIKPSFEVTKGQERVEIQPDGSLVALAPGDVSIQVTVPG
IAADKGFLFIEALGRIGVNGDDGIHWDILGMVLFFGVSLYINQTISGGAPSSNNNSGGDQQQQAQQTVNKITPLIFSGMF
LFFPLPAGVLMYMTIANAFQTVQTFILTKEPLPENLQKLVDEQEKSEKGRDKLPFERKGSKKKEKTSG

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=129, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 42620; Mature: 42620

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFGIGFLSNNVMLPILDFFYGIVPSYGFAIIALTLVIRFAVYPLSAKSIRSMRRTKITQ
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
PLMQKRVKEIQERYKNDPAKQQAAMSEVYKEFGNPLAGCLPILLQMPILFALFATLRGSP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
FANINYTANLQILPSEKMEQVQPQAVDVKTQNVYFDSGIHYPITLSLPAGNKVGVGETTQ
CCCCEEEEEEEECCCHHHHHCCCCCEEEEECEEEECCCCCCEEEEEECCCCCCCCCCCEE
FVLQSDSGKDFAALAAEYPDSNIKPSFEVTKGQERVEIQPDGSLVALAPGDVSIQVTVPG
EEEECCCCCCHHHHHHHCCCCCCCCCEEECCCCCEEEECCCCCEEEECCCCEEEEEEECC
IAADKGFLFIEALGRIGVNGDDGIHWDILGMVLFFGVSLYINQTISGGAPSSNNNSGGDQ
EECCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
QQQAQQTVNKITPLIFSGMFLFFPLPAGVLMYMTIANAFQTVQTFILTKEPLPENLQKLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
DEQEKSEKGRDKLPFERKGSKKKEKTSG
HHHHHHHCCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MDFGIGFLSNNVMLPILDFFYGIVPSYGFAIIALTLVIRFAVYPLSAKSIRSMRRTKITQ
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
PLMQKRVKEIQERYKNDPAKQQAAMSEVYKEFGNPLAGCLPILLQMPILFALFATLRGSP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
FANINYTANLQILPSEKMEQVQPQAVDVKTQNVYFDSGIHYPITLSLPAGNKVGVGETTQ
CCCCEEEEEEEECCCHHHHHCCCCCEEEEECEEEECCCCCCEEEEEECCCCCCCCCCCEE
FVLQSDSGKDFAALAAEYPDSNIKPSFEVTKGQERVEIQPDGSLVALAPGDVSIQVTVPG
EEEECCCCCCHHHHHHHCCCCCCCCCEEECCCCCEEEECCCCCEEEECCCCEEEEEEECC
IAADKGFLFIEALGRIGVNGDDGIHWDILGMVLFFGVSLYINQTISGGAPSSNNNSGGDQ
EECCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
QQQAQQTVNKITPLIFSGMFLFFPLPAGVLMYMTIANAFQTVQTFILTKEPLPENLQKLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
DEQEKSEKGRDKLPFERKGSKKKEKTSG
HHHHHHHCCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]