| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is pntB [H]
Identifier: 170077605
GI number: 170077605
Start: 1012007
End: 1013407
Strand: Reverse
Name: pntB [H]
Synonym: SYNPCC7002_A0984
Alternate gene names: 170077605
Gene position: 1013407-1012007 (Counterclockwise)
Preceding gene: 170077606
Following gene: 170077604
Centisome position: 33.69
GC content: 51.25
Gene sequence:
>1401_bases ATGGATAGCTTACTTACCAATGGCATCGAACTGAGTTATCTCGTGGCGGCCTGTCTGTTTATTCTGGGCTTAAAGAAATT AGGCTCTCCTGCAACAGCCCGTCAAGGCAACTCCATTGCAGCGGTGGGCATGTTACTGGCAGTGGTGGCGACCCTGCTCA ATCAACAGGTTTTAAACTATGGTCTGATCGCTGGGGGGATCGTCATCGGCAGTATCATCGGTGTGATCACGGCGAAAAAA GTCGAAATGACCGATATGCCCCAATTGGTCGGCCTCTTTAATGGTCTGGGGGGGGCGGCTTCGGCTCTGGTGGCGATCGC CGAATTTTGGCGACTCCTATCCCTCGGAGAAACCCTCTCTATCACCACTAGCCTCACGATTATTTTGGGGGTACTGATTG GCGGCGTCACCCTAACAGGAAGCCTCATTGCCTTTGGCAAATTACAAGGGATCATGCCCGGTCGCCCGGTAATTTTCCCG GCCCAACAGATCATTAATTTCGCCATTCTGGCAGGATTCCTCAGCGGCAGTATCTATTTGTTCGTGAATCCTGATCCGAA TATTTTTCTCGGCTTAGTGGGGATCTCCCTTGTGCTGGGCGTTCTCTTTGTGATCCCCATCGGTGGCGGCGATATGCCCG TGGTGATCTCTCTTCTCAATTCCTACTCTGGTCTAGCTGCCAGTGCCGCCGGGTTCGTGGTGGGCAACAATATGCTCATT ATTGCCGGGGCTTTGGTAGGCGCATCGGGGATTATCCTCACCCAAATCATGTGTAAGGCCATGAACCGTTCCATTACTAA CGTCTTGTTTGCGGGCTTTGGGAGTGATGGCGGTGCCCCAGAAGGCGACGGTGGTGCGGCCATTGATGGCGCCATTAAAA GCGTAGATCCTGAAGAAAGCGCCATGATGCTTGGCTATGCCCGCAGTGTTGTCATTATTCCGGGTTATGGGATGGCCGTG GCCCAGGCGCAACATTCCGTCAAAGAGCTGGCCGATATGCTGGAGAAAAAAGGCGTAGAAGTCAAATACGCGATTCACCC TGTGGCTGGTCGAATGCCGGGGCATATGAATGTGCTCCTCGCGGAGGCCAATGTCCCTTACACCCAGCTTTATGACATGG ACGATATCAATCCCCAGTTTGATAATACGGATGTGGCCCTAGTGATTGGTGCCAACGATGTGGTTAATCCGGCGGCGCGC CACGACAAAGGTAGCCCCATTTATGGGATGCCGATTTTGGAAGTAGATAAAGCTAAAACCACCATTGTAATCAAGCGAAG TATGAGTACAGGCTTTTCTGGGGTACAAAATGAGCTGTTCTTCAAAGACAAAACAATGATGCTGTTTGGCAGTGCCAAAG ACATGGTGGAAAAAATTTCTTCTGAAGTAAAAGAGCTTTAG
Upstream 100 bases:
>100_bases CGGTCTCATCGCGGTGGTCTGCGCCACGATCAATGTTGTCGGCGGTTTTTTGGTCACAGACCGGATGCTGCAAATGTTTA AGAAGAAGGAGGCCTAAGTG
Downstream 100 bases:
>100_bases GAAATTAACAGTATTTTTTTTATGATTAGGCCCTAATTGTTAAGCGATTAGGGCTTTTGATTGATTTGGCTTTGTCTTTT TTTACATATACAGGAGTATT
Product: nicotinamide nucleotide transhydrogenase, subunit beta
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit beta; Proton-translocating transhydrogenase NADP(H)-binding component; Pyridine nucleotide transhydrogenase subunit beta; dIII [H]
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MDSLLTNGIELSYLVAACLFILGLKKLGSPATARQGNSIAAVGMLLAVVATLLNQQVLNYGLIAGGIVIGSIIGVITAKK VEMTDMPQLVGLFNGLGGAASALVAIAEFWRLLSLGETLSITTSLTIILGVLIGGVTLTGSLIAFGKLQGIMPGRPVIFP AQQIINFAILAGFLSGSIYLFVNPDPNIFLGLVGISLVLGVLFVIPIGGGDMPVVISLLNSYSGLAASAAGFVVGNNMLI IAGALVGASGIILTQIMCKAMNRSITNVLFAGFGSDGGAPEGDGGAAIDGAIKSVDPEESAMMLGYARSVVIIPGYGMAV AQAQHSVKELADMLEKKGVEVKYAIHPVAGRMPGHMNVLLAEANVPYTQLYDMDDINPQFDNTDVALVIGANDVVNPAAR HDKGSPIYGMPILEVDKAKTTIVIKRSMSTGFSGVQNELFFKDKTMMLFGSAKDMVEKISSEVKEL
Sequences:
>Translated_466_residues MDSLLTNGIELSYLVAACLFILGLKKLGSPATARQGNSIAAVGMLLAVVATLLNQQVLNYGLIAGGIVIGSIIGVITAKK VEMTDMPQLVGLFNGLGGAASALVAIAEFWRLLSLGETLSITTSLTIILGVLIGGVTLTGSLIAFGKLQGIMPGRPVIFP AQQIINFAILAGFLSGSIYLFVNPDPNIFLGLVGISLVLGVLFVIPIGGGDMPVVISLLNSYSGLAASAAGFVVGNNMLI IAGALVGASGIILTQIMCKAMNRSITNVLFAGFGSDGGAPEGDGGAAIDGAIKSVDPEESAMMLGYARSVVIIPGYGMAV AQAQHSVKELADMLEKKGVEVKYAIHPVAGRMPGHMNVLLAEANVPYTQLYDMDDINPQFDNTDVALVIGANDVVNPAAR HDKGSPIYGMPILEVDKAKTTIVIKRSMSTGFSGVQNELFFKDKTMMLFGSAKDMVEKISSEVKEL >Mature_466_residues MDSLLTNGIELSYLVAACLFILGLKKLGSPATARQGNSIAAVGMLLAVVATLLNQQVLNYGLIAGGIVIGSIIGVITAKK VEMTDMPQLVGLFNGLGGAASALVAIAEFWRLLSLGETLSITTSLTIILGVLIGGVTLTGSLIAFGKLQGIMPGRPVIFP AQQIINFAILAGFLSGSIYLFVNPDPNIFLGLVGISLVLGVLFVIPIGGGDMPVVISLLNSYSGLAASAAGFVVGNNMLI IAGALVGASGIILTQIMCKAMNRSITNVLFAGFGSDGGAPEGDGGAAIDGAIKSVDPEESAMMLGYARSVVIIPGYGMAV AQAQHSVKELADMLEKKGVEVKYAIHPVAGRMPGHMNVLLAEANVPYTQLYDMDDINPQFDNTDVALVIGANDVVNPAAR HDKGSPIYGMPILEVDKAKTTIVIKRSMSTGFSGVQNELFFKDKTMMLFGSAKDMVEKISSEVKEL
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG1282
COG function: function code C; NAD/NADP transhydrogenase beta subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNT beta subunit family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=468, Percent_Identity=42.0940170940171, Blast_Score=351, Evalue=8e-97, Organism=Homo sapiens, GI122939153, Length=468, Percent_Identity=42.0940170940171, Blast_Score=351, Evalue=8e-97, Organism=Escherichia coli, GI1787886, Length=455, Percent_Identity=49.4505494505495, Blast_Score=409, Evalue=1e-115, Organism=Caenorhabditis elegans, GI17550456, Length=463, Percent_Identity=44.7084233261339, Blast_Score=365, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012136 - InterPro: IPR004003 [H]
Pfam domain/function: PF02233 PNTB [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 48434; Mature: 48434
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLLTNGIELSYLVAACLFILGLKKLGSPATARQGNSIAAVGMLLAVVATLLNQQVLNY CCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLIAGGIVIGSIIGVITAKKVEMTDMPQLVGLFNGLGGAASALVAIAEFWRLLSLGETLS HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHH ITTSLTIILGVLIGGVTLTGSLIAFGKLQGIMPGRPVIFPAQQIINFAILAGFLSGSIYL HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHCCEEEE FVNPDPNIFLGLVGISLVLGVLFVIPIGGGDMPVVISLLNSYSGLAASAAGFVVGNNMLI EECCCCCEEHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCHHHHCCCEEECCCEEE IAGALVGASGIILTQIMCKAMNRSITNVLFAGFGSDGGAPEGDGGAAIDGAIKSVDPEES EEEHHHCCCHHHHHHHHHHHHCCHHHHHHEEECCCCCCCCCCCCCCCCCCHHHCCCCCHH AMMLGYARSVVIIPGYGMAVAQAQHSVKELADMLEKKGVEVKYAIHPVAGRMPGHMNVLL HHHEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEE AEANVPYTQLYDMDDINPQFDNTDVALVIGANDVVNPAARHDKGSPIYGMPILEVDKAKT EECCCCHHEEECCCCCCCCCCCCCEEEEECCCHHCCCHHCCCCCCCEECCCEEEECCCCE TIVIKRSMSTGFSGVQNELFFKDKTMMLFGSAKDMVEKISSEVKEL EEEEEECCCCCCCCCCHHHEECCCEEEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure MDSLLTNGIELSYLVAACLFILGLKKLGSPATARQGNSIAAVGMLLAVVATLLNQQVLNY CCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLIAGGIVIGSIIGVITAKKVEMTDMPQLVGLFNGLGGAASALVAIAEFWRLLSLGETLS HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHH ITTSLTIILGVLIGGVTLTGSLIAFGKLQGIMPGRPVIFPAQQIINFAILAGFLSGSIYL HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHCCEEEE FVNPDPNIFLGLVGISLVLGVLFVIPIGGGDMPVVISLLNSYSGLAASAAGFVVGNNMLI EECCCCCEEHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCCHHHHCCCEEECCCEEE IAGALVGASGIILTQIMCKAMNRSITNVLFAGFGSDGGAPEGDGGAAIDGAIKSVDPEES EEEHHHCCCHHHHHHHHHHHHCCHHHHHHEEECCCCCCCCCCCCCCCCCCHHHCCCCCHH AMMLGYARSVVIIPGYGMAVAQAQHSVKELADMLEKKGVEVKYAIHPVAGRMPGHMNVLL HHHEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEE AEANVPYTQLYDMDDINPQFDNTDVALVIGANDVVNPAARHDKGSPIYGMPILEVDKAKT EECCCCHHEEECCCCCCCCCCCCCEEEEECCCHHCCCHHCCCCCCCEECCCEEEECCCCE TIVIKRSMSTGFSGVQNELFFKDKTMMLFGSAKDMVEKISSEVKEL EEEEEECCCCCCCCCCHHHEECCCEEEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]