Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170077586

Identifier: 170077586

GI number: 170077586

Start: 994564

End: 995115

Strand: Reverse

Name: 170077586

Synonym: SYNPCC7002_A0965

Alternate gene names: NA

Gene position: 995115-994564 (Counterclockwise)

Preceding gene: 170077590

Following gene: 170077584

Centisome position: 33.08

GC content: 47.83

Gene sequence:

>552_bases
ATGACGACCACAACTGAGTTACCAAGCATTTTGCAAACAGGCCAAGGTACAACCCAGGAAGCCCTTGAACTCTTTGACCG
CCTCGAAACCGTTGATCTGGACTTTATGTGGGGACGGTGGCGAGGCCGGGGAATTTATACAGGGCACCCAATGGATGGTC
TGCTGGAGTTAGGTAACTGGTACGGCAAAGAATTTATCGACCCGGAAACCGTACATCCCCTACTTTTTTCTGGTCGTCAG
GGAGAAATTTTTAAAGTAGCCCCCAACCTCAAAACCATGGAGATGGTCTTGAAATTGCCCATGCCCCAAAACCCGGCCTT
TAAACCGTTTCTAAGGTTGCTCAATGGCCTATTTAAAACCGAAAAAAGTCAAGCCAGACTCCGAATGATGGAATATCGCG
GCAAAGTCAGCGCCACCATGATCTATGACTGCCTGCCCATCAACGATTCCTTTAGGAAAATCAACGAAAATCAGGTTTTT
GGCGTGATGGATTTCAAGCAATCTACCCAGCCATTTTTCTTTATCCTGGAGCGCGTGACAGGTCAGCCATAG

Upstream 100 bases:

>100_bases
CTCCTATCTAGAAAACTCGCTTTTCTCGAGATCTATCACTGCCTGAATTTCTTGTTAGCCTATGGAAATGACCCCAAACA
TTGATGGAAAGCGATCGCCG

Downstream 100 bases:

>100_bases
CTTGAATGTGAGACATTCTGAACTTAGAGACGACTAATCTTTAGCGCACTAGGTTGAGCCGGATTGCCCTCTAATTTCAA
GGCGCGACCATTGGCAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTTTTELPSILQTGQGTTQEALELFDRLETVDLDFMWGRWRGRGIYTGHPMDGLLELGNWYGKEFIDPETVHPLLFSGRQ
GEIFKVAPNLKTMEMVLKLPMPQNPAFKPFLRLLNGLFKTEKSQARLRMMEYRGKVSATMIYDCLPINDSFRKINENQVF
GVMDFKQSTQPFFFILERVTGQP

Sequences:

>Translated_183_residues
MTTTTELPSILQTGQGTTQEALELFDRLETVDLDFMWGRWRGRGIYTGHPMDGLLELGNWYGKEFIDPETVHPLLFSGRQ
GEIFKVAPNLKTMEMVLKLPMPQNPAFKPFLRLLNGLFKTEKSQARLRMMEYRGKVSATMIYDCLPINDSFRKINENQVF
GVMDFKQSTQPFFFILERVTGQP
>Mature_182_residues
TTTTELPSILQTGQGTTQEALELFDRLETVDLDFMWGRWRGRGIYTGHPMDGLLELGNWYGKEFIDPETVHPLLFSGRQG
EIFKVAPNLKTMEMVLKLPMPQNPAFKPFLRLLNGLFKTEKSQARLRMMEYRGKVSATMIYDCLPINDSFRKINENQVFG
VMDFKQSTQPFFFILERVTGQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21149; Mature: 21018

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTTELPSILQTGQGTTQEALELFDRLETVDLDFMWGRWRGRGIYTGHPMDGLLELGNW
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCEECCEEECCCCHHHHHHHHHH
YGKEFIDPETVHPLLFSGRQGEIFKVAPNLKTMEMVLKLPMPQNPAFKPFLRLLNGLFKT
HCCCCCCCCCCCHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
EKSQARLRMMEYRGKVSATMIYDCLPINDSFRKINENQVFGVMDFKQSTQPFFFILERVT
CHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHC
GQP
CCC
>Mature Secondary Structure 
TTTTELPSILQTGQGTTQEALELFDRLETVDLDFMWGRWRGRGIYTGHPMDGLLELGNW
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCEECCEEECCCCHHHHHHHHHH
YGKEFIDPETVHPLLFSGRQGEIFKVAPNLKTMEMVLKLPMPQNPAFKPFLRLLNGLFKT
HCCCCCCCCCCCHHHCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
EKSQARLRMMEYRGKVSATMIYDCLPINDSFRKINENQVFGVMDFKQSTQPFFFILERVT
CHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHC
GQP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA