Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is pyrH [H]

Identifier: 170077574

GI number: 170077574

Start: 983211

End: 983933

Strand: Reverse

Name: pyrH [H]

Synonym: SYNPCC7002_A0953

Alternate gene names: 170077574

Gene position: 983933-983211 (Counterclockwise)

Preceding gene: 170077576

Following gene: 170077573

Centisome position: 32.71

GC content: 51.59

Gene sequence:

>723_bases
ATGGCGTACCAACGTGTTCTTTTAAAGCTGAGTGGTGAGGCTCTGATGGGGGATCTCGGTTACGGGATTGACCCGCAAAT
CGTATCAGACATCGCCAAAGAAATTGCGGAAGTTGTCTCCAGCGGTGTGCAAATTGTGATCGTGGTTGGCGGTGGCAATA
TTTTCCGTGGGGTACAGGCTTCGGCTAAAGGGATGGATCGGGCCACGGCGGATTATATTGGCATGATCGCGACGGTGATG
AATGCCATGACACTCCAGGATGCCCTCGAACAAATCGATATTCCGACCCGAGTCCAAACGGCGATCGCCATGCAAGAGGT
CGCAGAACCCTATATCCGGCGACGGGCCATCCGGCATTTAGAAAAAGGCCGGGTAGTAATTTTTGGCGCAGGCTCCGGGA
ATCCATTCTTTACCACCGATACCACCGCTGCCCTGAGGGCCGCCGAAATTGACGCCGAAGTGATCTTCAAAGCCACCAAA
GTTGATGGGGTTTACGACAGCGATCCAGCGAAAAATCCCGCAGCAAAACGCTATGAAAGCTTGACCTATGCCCACGTTCT
CGCCAATGATTTAAGGGTAATGGATGGGACGGCGATCGCCCTTTGCAAAGAAAACGACATCCCGATTATGGTGTTTAATC
TATTTGAGAAAGGCAACATTGTCCGTGCCGTTAAAGGTGAACCAGTTGGAACAATCGTGGGAGGTTCCTGTGCAGTTAAG
TGA

Upstream 100 bases:

>100_bases
TTTTTCAGGGCGCAAAGTTTTCTTGGGTCGGGCCGCAATTTCCGAAAAGCTGCTATTTTAATGGAGGCAAAACGCGAGTT
AGATAGGAACGGGACAACCG

Downstream 100 bases:

>100_bases
ACTTAGAGAAAATATGCAAAAGACCATTGAGGCAACCCAGCGGTCTTTTAATACCCTCCGGACAGGGAGAGCCAGCGCCT
CCCTCCTCGACCGGATTACG

Product: uridylate kinase

Products: NA

Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MAYQRVLLKLSGEALMGDLGYGIDPQIVSDIAKEIAEVVSSGVQIVIVVGGGNIFRGVQASAKGMDRATADYIGMIATVM
NAMTLQDALEQIDIPTRVQTAIAMQEVAEPYIRRRAIRHLEKGRVVIFGAGSGNPFFTTDTTAALRAAEIDAEVIFKATK
VDGVYDSDPAKNPAAKRYESLTYAHVLANDLRVMDGTAIALCKENDIPIMVFNLFEKGNIVRAVKGEPVGTIVGGSCAVK

Sequences:

>Translated_240_residues
MAYQRVLLKLSGEALMGDLGYGIDPQIVSDIAKEIAEVVSSGVQIVIVVGGGNIFRGVQASAKGMDRATADYIGMIATVM
NAMTLQDALEQIDIPTRVQTAIAMQEVAEPYIRRRAIRHLEKGRVVIFGAGSGNPFFTTDTTAALRAAEIDAEVIFKATK
VDGVYDSDPAKNPAAKRYESLTYAHVLANDLRVMDGTAIALCKENDIPIMVFNLFEKGNIVRAVKGEPVGTIVGGSCAVK
>Mature_239_residues
AYQRVLLKLSGEALMGDLGYGIDPQIVSDIAKEIAEVVSSGVQIVIVVGGGNIFRGVQASAKGMDRATADYIGMIATVMN
AMTLQDALEQIDIPTRVQTAIAMQEVAEPYIRRRAIRHLEKGRVVIFGAGSGNPFFTTDTTAALRAAEIDAEVIFKATKV
DGVYDSDPAKNPAAKRYESLTYAHVLANDLRVMDGTAIALCKENDIPIMVFNLFEKGNIVRAVKGEPVGTIVGGSCAVK

Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]

COG id: COG0528

COG function: function code F; Uridylate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UMP kinase family [H]

Homologues:

Organism=Escherichia coli, GI1786367, Length=231, Percent_Identity=49.3506493506493, Blast_Score=238, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001048
- InterPro:   IPR011817
- InterPro:   IPR015963 [H]

Pfam domain/function: PF00696 AA_kinase [H]

EC number: =2.7.4.22 [H]

Molecular weight: Translated: 25649; Mature: 25518

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQRVLLKLSGEALMGDLGYGIDPQIVSDIAKEIAEVVSSGVQIVIVVGGGNIFRGVQA
CCHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCHH
SAKGMDRATADYIGMIATVMNAMTLQDALEQIDIPTRVQTAIAMQEVAEPYIRRRAIRHL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EKGRVVIFGAGSGNPFFTTDTTAALRAAEIDAEVIFKATKVDGVYDSDPAKNPAAKRYES
HCCCEEEEECCCCCCEEECCHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCHHHHHHHH
LTYAHVLANDLRVMDGTAIALCKENDIPIMVFNLFEKGNIVRAVKGEPVGTIVGGSCAVK
HHHHHHHHHHCEEECCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEECCCEECC
>Mature Secondary Structure 
AYQRVLLKLSGEALMGDLGYGIDPQIVSDIAKEIAEVVSSGVQIVIVVGGGNIFRGVQA
CHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCHH
SAKGMDRATADYIGMIATVMNAMTLQDALEQIDIPTRVQTAIAMQEVAEPYIRRRAIRHL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EKGRVVIFGAGSGNPFFTTDTTAALRAAEIDAEVIFKATKVDGVYDSDPAKNPAAKRYES
HCCCEEEEECCCCCCEEECCHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCHHHHHHHH
LTYAHVLANDLRVMDGTAIALCKENDIPIMVFNLFEKGNIVRAVKGEPVGTIVGGSCAVK
HHHHHHHHHHCEEECCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]