| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077552
Identifier: 170077552
GI number: 170077552
Start: 961114
End: 961878
Strand: Direct
Name: 170077552
Synonym: SYNPCC7002_A0930
Alternate gene names: NA
Gene position: 961114-961878 (Clockwise)
Preceding gene: 170077551
Following gene: 170077553
Centisome position: 31.95
GC content: 48.37
Gene sequence:
>765_bases GTGTTAGAACGTCTGAAACAAGATTTAAAAAACGATCTGATTGCCGGGTTGCTCGTTGTTATCCCCCTAGCGACCACCAT TTGGTTGACGATCACGATTGCGACTTGGGTGATTAATTTTTTGACGCAAATCCCTAAGCAGATTAATCCGTTCGATGGCC TGGACCCAATCTTGACCAATGCCTTAAATATTGGCGTTGGGATCACCGTTCCCCTGACATTTATTCTGGTGATCGGTCTG ATGGCACGAAATTTTGTCGGACGTTGGCTGTTGGATGTGGGGGAACAAATTCTCCAAGGGATTCCCCTAGCAGGCGCAAT TTATAAAACCCTCAAGCAACTATTAGAAACTCTCTTGCGGGATTCCCAGAGTCGCTTCCGACGAGTAGTGATGGTGGAAT ATCCACGACCTGGTGTTTGGACGCTAGGCTTTGTCACAGGAACAGTCAGTCCCCAATTACAGGCCCAGGTGGCCGATCCT CTCTTGAGTGTGTTTATTCCGACGACTCCGAACCCCACCTCTGGCTGGTATGCAATGGTGCCAGAAGATGATGTGATCAA CCTCTCAATGTCCATTGAGGATGCCTTTAAAGTCTTAATTTCTGGGGGCATTGTGAGTCCGGAGGCAGAAACTGAACGAA AATCAGTGCGGGGCACAATTCCCCTCAATCTCACCCGCCGTAAAAAGTCCCGTGAATTGGAGCGTCCTCTTGAAGAATTA AACAGTCCCCAGGCGGATATGCTTTCTCTAGAGGAAGAAGTGTAG
Upstream 100 bases:
>100_bases AAAATTTCTCTGATTTCCTAAACCGACAAAAACGACTACCCACTGTACATATTCCCGCCATTTCGTCCACCATCTCCCTA CCAGGAAACCTCGCCCTACC
Downstream 100 bases:
>100_bases TTTAATGGTGCCTCTGAGTGACGTTGATTTTCCTTATTGTTTATCCCTAGTTAGACTATGCCCGCCCGTAAACAGCCCCG TAGTGTTGCCCGTGAAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MLERLKQDLKNDLIAGLLVVIPLATTIWLTITIATWVINFLTQIPKQINPFDGLDPILTNALNIGVGITVPLTFILVIGL MARNFVGRWLLDVGEQILQGIPLAGAIYKTLKQLLETLLRDSQSRFRRVVMVEYPRPGVWTLGFVTGTVSPQLQAQVADP LLSVFIPTTPNPTSGWYAMVPEDDVINLSMSIEDAFKVLISGGIVSPEAETERKSVRGTIPLNLTRRKKSRELERPLEEL NSPQADMLSLEEEV
Sequences:
>Translated_254_residues MLERLKQDLKNDLIAGLLVVIPLATTIWLTITIATWVINFLTQIPKQINPFDGLDPILTNALNIGVGITVPLTFILVIGL MARNFVGRWLLDVGEQILQGIPLAGAIYKTLKQLLETLLRDSQSRFRRVVMVEYPRPGVWTLGFVTGTVSPQLQAQVADP LLSVFIPTTPNPTSGWYAMVPEDDVINLSMSIEDAFKVLISGGIVSPEAETERKSVRGTIPLNLTRRKKSRELERPLEEL NSPQADMLSLEEEV >Mature_254_residues MLERLKQDLKNDLIAGLLVVIPLATTIWLTITIATWVINFLTQIPKQINPFDGLDPILTNALNIGVGITVPLTFILVIGL MARNFVGRWLLDVGEQILQGIPLAGAIYKTLKQLLETLLRDSQSRFRRVVMVEYPRPGVWTLGFVTGTVSPQLQAQVADP LLSVFIPTTPNPTSGWYAMVPEDDVINLSMSIEDAFKVLISGGIVSPEAETERKSVRGTIPLNLTRRKKSRELERPLEEL NSPQADMLSLEEEV
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28223; Mature: 28223
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERLKQDLKNDLIAGLLVVIPLATTIWLTITIATWVINFLTQIPKQINPFDGLDPILTN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH ALNIGVGITVPLTFILVIGLMARNFVGRWLLDVGEQILQGIPLAGAIYKTLKQLLETLLR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DSQSRFRRVVMVEYPRPGVWTLGFVTGTVSPQLQAQVADPLLSVFIPTTPNPTSGWYAMV HHHHHHHEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEC PEDDVINLSMSIEDAFKVLISGGIVSPEAETERKSVRGTIPLNLTRRKKSRELERPLEEL CCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH NSPQADMLSLEEEV CCCHHHHHHHHCCC >Mature Secondary Structure MLERLKQDLKNDLIAGLLVVIPLATTIWLTITIATWVINFLTQIPKQINPFDGLDPILTN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH ALNIGVGITVPLTFILVIGLMARNFVGRWLLDVGEQILQGIPLAGAIYKTLKQLLETLLR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH DSQSRFRRVVMVEYPRPGVWTLGFVTGTVSPQLQAQVADPLLSVFIPTTPNPTSGWYAMV HHHHHHHEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEC PEDDVINLSMSIEDAFKVLISGGIVSPEAETERKSVRGTIPLNLTRRKKSRELERPLEEL CCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH NSPQADMLSLEEEV CCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA