| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077517
Identifier: 170077517
GI number: 170077517
Start: 928143
End: 928874
Strand: Direct
Name: 170077517
Synonym: SYNPCC7002_A0895
Alternate gene names: NA
Gene position: 928143-928874 (Clockwise)
Preceding gene: 170077516
Following gene: 170077518
Centisome position: 30.86
GC content: 57.92
Gene sequence:
>732_bases GTGTTGAAGTCTTGCCCTAATCTGTGTCCCCTATTGGCTGTTCTTGGGGGATTTGTGCTGCTTTCGCCTGGGGCGATCGC CCAAGAAGTTTTCACCTTTGAGCCGTTACCCCCGGTCCCCCCAGTGATTCCTCTCTGGGAAGACCCCCCCGCCTCAGAAC CTGTGTTTTACGATGGCCCTGCAACGACGGTGGCCCCTGGTCAAGAGTACATTTTTGAGGCTCCGGCTCCCACCGCGTCC CCTCCGGCATTCGTCCCCTCGACGCCGCGGTCAAGCGCCCGCTACCGGGTTGAAGTAGTCGGATCTAGTCCCTTGATGTT GGCAACGGTGCGCCAGGTGGAGCCAACTGCTTTCGTGAAAGGCGATCGCATCCAGGCTGGTTTGTTTTCTGAGCGCGAAA ATGCAGAAACGCTGCGGGCCAACCTCCAAGCCAGTGGCATTGCTGCCCAGATTACAGACATGGGTTCCGGGGATTCATTC GCTGCCAATAGCACCACAGCAGCCAACAGCCATGGGGGTTATTTTGTGGCGATTCCCAGCCGTGGCCAGGGCCAAGACAT TCAAGACCAACTGCGGCGCATGGGCATTCAACAGGATCTGATCGAAGCAAAAAGCGCTCCCCGGGGGCCTCACATCGCCA TCGGTCCTTTTGCTCAACGGGAAGAGGCAGAGTTGATGAATGTGCGGGTACGCCTCATGGATCTCGATGGTCGCCTGTAT TTCCGCAACTAG
Upstream 100 bases:
>100_bases AATCTTCAGGACTGGGGGTCAGCATTTGCGTTTGGCCAAATCTTTAATAAGATTGTCAAAAAAGCCTATTTACCCCGTCT GTTTACGGAGGAAAAGATCG
Downstream 100 bases:
>100_bases CTTTCATCGGCTTTCCCTTACAATCGGAACACACTTGATTTGTCGTTTTTTTCAGAAAAACCATGGTTACAACAAACCAG CAAGCGATTCAGATTGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MLKSCPNLCPLLAVLGGFVLLSPGAIAQEVFTFEPLPPVPPVIPLWEDPPASEPVFYDGPATTVAPGQEYIFEAPAPTAS PPAFVPSTPRSSARYRVEVVGSSPLMLATVRQVEPTAFVKGDRIQAGLFSERENAETLRANLQASGIAAQITDMGSGDSF AANSTTAANSHGGYFVAIPSRGQGQDIQDQLRRMGIQQDLIEAKSAPRGPHIAIGPFAQREEAELMNVRVRLMDLDGRLY FRN
Sequences:
>Translated_243_residues MLKSCPNLCPLLAVLGGFVLLSPGAIAQEVFTFEPLPPVPPVIPLWEDPPASEPVFYDGPATTVAPGQEYIFEAPAPTAS PPAFVPSTPRSSARYRVEVVGSSPLMLATVRQVEPTAFVKGDRIQAGLFSERENAETLRANLQASGIAAQITDMGSGDSF AANSTTAANSHGGYFVAIPSRGQGQDIQDQLRRMGIQQDLIEAKSAPRGPHIAIGPFAQREEAELMNVRVRLMDLDGRLY FRN >Mature_243_residues MLKSCPNLCPLLAVLGGFVLLSPGAIAQEVFTFEPLPPVPPVIPLWEDPPASEPVFYDGPATTVAPGQEYIFEAPAPTAS PPAFVPSTPRSSARYRVEVVGSSPLMLATVRQVEPTAFVKGDRIQAGLFSERENAETLRANLQASGIAAQITDMGSGDSF AANSTTAANSHGGYFVAIPSRGQGQDIQDQLRRMGIQQDLIEAKSAPRGPHIAIGPFAQREEAELMNVRVRLMDLDGRLY FRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26059; Mature: 26059
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKSCPNLCPLLAVLGGFVLLSPGAIAQEVFTFEPLPPVPPVIPLWEDPPASEPVFYDGP CCCCCCCHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC ATTVAPGQEYIFEAPAPTASPPAFVPSTPRSSARYRVEVVGSSPLMLATVRQVEPTAFVK CCEECCCHHEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEHHHCCCCEEEE GDRIQAGLFSERENAETLRANLQASGIAAQITDMGSGDSFAANSTTAANSHGGYFVAIPS CCCEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC RGQGQDIQDQLRRMGIQQDLIEAKSAPRGPHIAIGPFAQREEAELMNVRVRLMDLDGRLY CCCCCCHHHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHEEEEEEEEEEECCEEE FRN ECC >Mature Secondary Structure MLKSCPNLCPLLAVLGGFVLLSPGAIAQEVFTFEPLPPVPPVIPLWEDPPASEPVFYDGP CCCCCCCHHHHHHHHHHHEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC ATTVAPGQEYIFEAPAPTASPPAFVPSTPRSSARYRVEVVGSSPLMLATVRQVEPTAFVK CCEECCCHHEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEHHHCCCCEEEE GDRIQAGLFSERENAETLRANLQASGIAAQITDMGSGDSFAANSTTAANSHGGYFVAIPS CCCEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECC RGQGQDIQDQLRRMGIQQDLIEAKSAPRGPHIAIGPFAQREEAELMNVRVRLMDLDGRLY CCCCCCHHHHHHHCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHEEEEEEEEEEECCEEE FRN ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA