Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is cysW [H]

Identifier: 170077420

GI number: 170077420

Start: 826201

End: 827025

Strand: Direct

Name: cysW [H]

Synonym: SYNPCC7002_A0798

Alternate gene names: 170077420

Gene position: 826201-827025 (Clockwise)

Preceding gene: 170077419

Following gene: 170077421

Centisome position: 27.47

GC content: 42.3

Gene sequence:

>825_bases
ATGCAAACTAAGCTTAAATCCTTTGAATTTAAACTCTCTTCCCAATGGCTAATTGGGATTACGCTTACTTATCTCGCTCT
AATTCTTTTAATTCCTATTCTTGCCATTTTTTATGAAGCCTTTCATCAGGGAATAGGTGTTTTCATTGAATCACTCCAGG
CCCGCGCTTTTATTCATGCAGTCAAATTGACGGTGATCATTGCTTTAATTAGCGTGCCATTGAATACAATATTTGGTCTT
TGTGCCGCTTGGGTATTGGCAAGAAAAAAATTTTGGGGGCGGACTCTGTTTCTCAGTGTGATCGATCTTCCTTTTTCAAT
TTCCCCCGTCGTTGCTGGCTTGATGATTGTTTTGCTTTATGGGCAAAATGGTTGGCTAGGTGCTCTTTTTGAACAGGCAA
ATATCAAGATCCTTTTTGCTTTGCCGGGCATGGTGATTGCCACACTTTTTGTAACGTTGCCATTTGTCGCCAGGGAAGTT
ATTCCTGTTTTAGAAGAAATGGGACCAGATCAAGAAGAATCCGCTCGTACTCTTGGTGCTAGTGATTGGCAAATTTTTTG
GCGGGTGACATTACCAAATATTCGTTGGGGATTACTCTACGGCGTTTTGCTGACAAATGCCCGGGCGATGGGAGAATTTG
GGGCTGTTTCAGTGGTTTCCGGGAGTATCCTCGGCAAAACATCAACATTACCAATTCTTGTAGAACAGGAACATAATAAT
TATGCGACAGAATCAGCTTTCGCGGCGGCTGTTGTTTTAGCTTTGCTTGCCTTGGTGACACTGGTGCTGAAAGAGATCTT
AGAACAGAATACCCACTCCACTTAA

Upstream 100 bases:

>100_bases
TTTGATTACGAAGGGGCGACGGTGATTGGCTCGGTGCTGTTAATTGTTTCTTTGCTGCTTCTATTCATTATCAATTTTCT
ACAGCAATGGGGAAGGCGTT

Downstream 100 bases:

>100_bases
TGGCAATTTAGATCATAATTTATTTCACTAAATCTCGCCCCCCTTATCACTAATACACCCCTTATTACTATAGAAAAATG
AGTATTTTTGTTGATTCGGT

Product: sulfate ABC transporter, permease protein CysW

Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MQTKLKSFEFKLSSQWLIGITLTYLALILLIPILAIFYEAFHQGIGVFIESLQARAFIHAVKLTVIIALISVPLNTIFGL
CAAWVLARKKFWGRTLFLSVIDLPFSISPVVAGLMIVLLYGQNGWLGALFEQANIKILFALPGMVIATLFVTLPFVAREV
IPVLEEMGPDQEESARTLGASDWQIFWRVTLPNIRWGLLYGVLLTNARAMGEFGAVSVVSGSILGKTSTLPILVEQEHNN
YATESAFAAAVVLALLALVTLVLKEILEQNTHST

Sequences:

>Translated_274_residues
MQTKLKSFEFKLSSQWLIGITLTYLALILLIPILAIFYEAFHQGIGVFIESLQARAFIHAVKLTVIIALISVPLNTIFGL
CAAWVLARKKFWGRTLFLSVIDLPFSISPVVAGLMIVLLYGQNGWLGALFEQANIKILFALPGMVIATLFVTLPFVAREV
IPVLEEMGPDQEESARTLGASDWQIFWRVTLPNIRWGLLYGVLLTNARAMGEFGAVSVVSGSILGKTSTLPILVEQEHNN
YATESAFAAAVVLALLALVTLVLKEILEQNTHST
>Mature_274_residues
MQTKLKSFEFKLSSQWLIGITLTYLALILLIPILAIFYEAFHQGIGVFIESLQARAFIHAVKLTVIIALISVPLNTIFGL
CAAWVLARKKFWGRTLFLSVIDLPFSISPVVAGLMIVLLYGQNGWLGALFEQANIKILFALPGMVIATLFVTLPFVAREV
IPVLEEMGPDQEESARTLGASDWQIFWRVTLPNIRWGLLYGVLLTNARAMGEFGAVSVVSGSILGKTSTLPILVEQEHNN
YATESAFAAAVVLALLALVTLVLKEILEQNTHST

Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4208

COG function: function code P; ABC-type sulfate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87082099, Length=269, Percent_Identity=50.9293680297398, Blast_Score=268, Evalue=3e-73,
Organism=Escherichia coli, GI1788764, Length=196, Percent_Identity=41.3265306122449, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1786980, Length=216, Percent_Identity=31.9444444444444, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011866
- InterPro:   IPR005667 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30114; Mature: 30114

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTKLKSFEFKLSSQWLIGITLTYLALILLIPILAIFYEAFHQGIGVFIESLQARAFIHA
CCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKLTVIIALISVPLNTIFGLCAAWVLARKKFWGRTLFLSVIDLPFSISPVVAGLMIVLLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GQNGWLGALFEQANIKILFALPGMVIATLFVTLPFVAREVIPVLEEMGPDQEESARTLGA
CCCCCHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
SDWQIFWRVTLPNIRWGLLYGVLLTNARAMGEFGAVSVVSGSILGKTSTLPILVEQEHNN
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCC
YATESAFAAAVVLALLALVTLVLKEILEQNTHST
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQTKLKSFEFKLSSQWLIGITLTYLALILLIPILAIFYEAFHQGIGVFIESLQARAFIHA
CCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKLTVIIALISVPLNTIFGLCAAWVLARKKFWGRTLFLSVIDLPFSISPVVAGLMIVLLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
GQNGWLGALFEQANIKILFALPGMVIATLFVTLPFVAREVIPVLEEMGPDQEESARTLGA
CCCCCHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
SDWQIFWRVTLPNIRWGLLYGVLLTNARAMGEFGAVSVVSGSILGKTSTLPILVEQEHNN
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCC
YATESAFAAAVVLALLALVTLVLKEILEQNTHST
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]

Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]