| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is cysW [H]
Identifier: 170077420
GI number: 170077420
Start: 826201
End: 827025
Strand: Direct
Name: cysW [H]
Synonym: SYNPCC7002_A0798
Alternate gene names: 170077420
Gene position: 826201-827025 (Clockwise)
Preceding gene: 170077419
Following gene: 170077421
Centisome position: 27.47
GC content: 42.3
Gene sequence:
>825_bases ATGCAAACTAAGCTTAAATCCTTTGAATTTAAACTCTCTTCCCAATGGCTAATTGGGATTACGCTTACTTATCTCGCTCT AATTCTTTTAATTCCTATTCTTGCCATTTTTTATGAAGCCTTTCATCAGGGAATAGGTGTTTTCATTGAATCACTCCAGG CCCGCGCTTTTATTCATGCAGTCAAATTGACGGTGATCATTGCTTTAATTAGCGTGCCATTGAATACAATATTTGGTCTT TGTGCCGCTTGGGTATTGGCAAGAAAAAAATTTTGGGGGCGGACTCTGTTTCTCAGTGTGATCGATCTTCCTTTTTCAAT TTCCCCCGTCGTTGCTGGCTTGATGATTGTTTTGCTTTATGGGCAAAATGGTTGGCTAGGTGCTCTTTTTGAACAGGCAA ATATCAAGATCCTTTTTGCTTTGCCGGGCATGGTGATTGCCACACTTTTTGTAACGTTGCCATTTGTCGCCAGGGAAGTT ATTCCTGTTTTAGAAGAAATGGGACCAGATCAAGAAGAATCCGCTCGTACTCTTGGTGCTAGTGATTGGCAAATTTTTTG GCGGGTGACATTACCAAATATTCGTTGGGGATTACTCTACGGCGTTTTGCTGACAAATGCCCGGGCGATGGGAGAATTTG GGGCTGTTTCAGTGGTTTCCGGGAGTATCCTCGGCAAAACATCAACATTACCAATTCTTGTAGAACAGGAACATAATAAT TATGCGACAGAATCAGCTTTCGCGGCGGCTGTTGTTTTAGCTTTGCTTGCCTTGGTGACACTGGTGCTGAAAGAGATCTT AGAACAGAATACCCACTCCACTTAA
Upstream 100 bases:
>100_bases TTTGATTACGAAGGGGCGACGGTGATTGGCTCGGTGCTGTTAATTGTTTCTTTGCTGCTTCTATTCATTATCAATTTTCT ACAGCAATGGGGAAGGCGTT
Downstream 100 bases:
>100_bases TGGCAATTTAGATCATAATTTATTTCACTAAATCTCGCCCCCCTTATCACTAATACACCCCTTATTACTATAGAAAAATG AGTATTTTTGTTGATTCGGT
Product: sulfate ABC transporter, permease protein CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MQTKLKSFEFKLSSQWLIGITLTYLALILLIPILAIFYEAFHQGIGVFIESLQARAFIHAVKLTVIIALISVPLNTIFGL CAAWVLARKKFWGRTLFLSVIDLPFSISPVVAGLMIVLLYGQNGWLGALFEQANIKILFALPGMVIATLFVTLPFVAREV IPVLEEMGPDQEESARTLGASDWQIFWRVTLPNIRWGLLYGVLLTNARAMGEFGAVSVVSGSILGKTSTLPILVEQEHNN YATESAFAAAVVLALLALVTLVLKEILEQNTHST
Sequences:
>Translated_274_residues MQTKLKSFEFKLSSQWLIGITLTYLALILLIPILAIFYEAFHQGIGVFIESLQARAFIHAVKLTVIIALISVPLNTIFGL CAAWVLARKKFWGRTLFLSVIDLPFSISPVVAGLMIVLLYGQNGWLGALFEQANIKILFALPGMVIATLFVTLPFVAREV IPVLEEMGPDQEESARTLGASDWQIFWRVTLPNIRWGLLYGVLLTNARAMGEFGAVSVVSGSILGKTSTLPILVEQEHNN YATESAFAAAVVLALLALVTLVLKEILEQNTHST >Mature_274_residues MQTKLKSFEFKLSSQWLIGITLTYLALILLIPILAIFYEAFHQGIGVFIESLQARAFIHAVKLTVIIALISVPLNTIFGL CAAWVLARKKFWGRTLFLSVIDLPFSISPVVAGLMIVLLYGQNGWLGALFEQANIKILFALPGMVIATLFVTLPFVAREV IPVLEEMGPDQEESARTLGASDWQIFWRVTLPNIRWGLLYGVLLTNARAMGEFGAVSVVSGSILGKTSTLPILVEQEHNN YATESAFAAAVVLALLALVTLVLKEILEQNTHST
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=269, Percent_Identity=50.9293680297398, Blast_Score=268, Evalue=3e-73, Organism=Escherichia coli, GI1788764, Length=196, Percent_Identity=41.3265306122449, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1786980, Length=216, Percent_Identity=31.9444444444444, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30114; Mature: 30114
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTKLKSFEFKLSSQWLIGITLTYLALILLIPILAIFYEAFHQGIGVFIESLQARAFIHA CCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKLTVIIALISVPLNTIFGLCAAWVLARKKFWGRTLFLSVIDLPFSISPVVAGLMIVLLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC GQNGWLGALFEQANIKILFALPGMVIATLFVTLPFVAREVIPVLEEMGPDQEESARTLGA CCCCCHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC SDWQIFWRVTLPNIRWGLLYGVLLTNARAMGEFGAVSVVSGSILGKTSTLPILVEQEHNN CCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCC YATESAFAAAVVLALLALVTLVLKEILEQNTHST CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQTKLKSFEFKLSSQWLIGITLTYLALILLIPILAIFYEAFHQGIGVFIESLQARAFIHA CCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKLTVIIALISVPLNTIFGLCAAWVLARKKFWGRTLFLSVIDLPFSISPVVAGLMIVLLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC GQNGWLGALFEQANIKILFALPGMVIATLFVTLPFVAREVIPVLEEMGPDQEESARTLGA CCCCCHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC SDWQIFWRVTLPNIRWGLLYGVLLTNARAMGEFGAVSVVSGSILGKTSTLPILVEQEHNN CCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCC YATESAFAAAVVLALLALVTLVLKEILEQNTHST CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]