| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077418
Identifier: 170077418
GI number: 170077418
Start: 825010
End: 825303
Strand: Direct
Name: 170077418
Synonym: SYNPCC7002_A0796
Alternate gene names: NA
Gene position: 825010-825303 (Clockwise)
Preceding gene: 170077417
Following gene: 170077419
Centisome position: 27.43
GC content: 44.9
Gene sequence:
>294_bases ATGTCCCCTGAATCAGTCGAAAAAAATCCGGGCGATCGCCATACTCAAGTCAATATTCTGGTGCAAATCCCAAAGCAATA CCAACAGGATCCAATCATCACCCAACTAGCCGTTAAATATAATATTCAAGTCAATATTTTGGCGGCGACTTTAGGTCGGG ATAATACGGTCAGCGGTTGGTTTGATCTCCAAATTTCCGGCCCCCATCAAGCGGTTAAAGATGCGATCCTCTACCTAGAA GAGCAGAACATCGGTGTCTATCACAAAGAGCATCCAGAAACTGATGGTTGGTGA
Upstream 100 bases:
>100_bases ACCAAAATTCTTTGGTGATGGTGGCATCTTTGATCAAATTTTTCAACAGTAATTAATTGAACATCAAGCTGAATTCTTGA ATAGGAGAGGTACAGCAATT
Downstream 100 bases:
>100_bases AAATTTTTTAACTTCCTAGACACTCATCAGTAATTTTTGCTCTGTAAACCATGAAAATTTTATCTCTGGCACAATCTCGA AGCTTTTTATCGATTAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSPESVEKNPGDRHTQVNILVQIPKQYQQDPIITQLAVKYNIQVNILAATLGRDNTVSGWFDLQISGPHQAVKDAILYLE EQNIGVYHKEHPETDGW
Sequences:
>Translated_97_residues MSPESVEKNPGDRHTQVNILVQIPKQYQQDPIITQLAVKYNIQVNILAATLGRDNTVSGWFDLQISGPHQAVKDAILYLE EQNIGVYHKEHPETDGW >Mature_96_residues SPESVEKNPGDRHTQVNILVQIPKQYQQDPIITQLAVKYNIQVNILAATLGRDNTVSGWFDLQISGPHQAVKDAILYLEE QNIGVYHKEHPETDGW
Specific function: May have a regulatory function [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018449 [H]
Pfam domain/function: PF09383 NIL [H]
EC number: NA
Molecular weight: Translated: 10992; Mature: 10861
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPESVEKNPGDRHTQVNILVQIPKQYQQDPIITQLAVKYNIQVNILAATLGRDNTVSGW CCCCCCCCCCCCCCEEEEEEEEECHHCCCCCCEEEEEEEECEEEEEEEEECCCCCCCCCE FDLQISGPHQAVKDAILYLEEQNIGVYHKEHPETDGW EEEEECCCHHHHHHHEEEEECCCCCEEECCCCCCCCC >Mature Secondary Structure SPESVEKNPGDRHTQVNILVQIPKQYQQDPIITQLAVKYNIQVNILAATLGRDNTVSGW CCCCCCCCCCCCCEEEEEEEEECHHCCCCCCEEEEEEEECEEEEEEEEECCCCCCCCCE FDLQISGPHQAVKDAILYLEEQNIGVYHKEHPETDGW EEEEECCCHHHHHHHEEEEECCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8425067; 8905231 [H]