| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077401
Identifier: 170077401
GI number: 170077401
Start: 806575
End: 807699
Strand: Direct
Name: 170077401
Synonym: SYNPCC7002_A0778
Alternate gene names: NA
Gene position: 806575-807699 (Clockwise)
Preceding gene: 170077400
Following gene: 170077402
Centisome position: 26.81
GC content: 55.64
Gene sequence:
>1125_bases ATGAATATTCGCGCAGGTCTCACGGCGTTGGGGGTGAGTATGGCTACCCTAGGGCCCATTAGCTTTGCACCCATAGCCCA AGCTAATAGCGGTTTGTTTGGCACCCAGGATTTGACCCCTGGAGATGTGGTGGCGATCGCCGTCCCCCTTGCTGGTGGTG AAGCCTATAATCTTGTGATCCTCGAACAACTCGACCAAAACCGGGCCTGTTGGCGAGAACAGGGAGGTTCCCCCACGGTC ATTGATCCGCTACTGTTGCAATTTGACTTTACGGGGATTTGTGGCCGCAGCACCGATTCCAACGGCTATTCCCTGCGCCT AGGGGAGCAAGATATGGCTTGGCGCTATCGCCTCCAGTTGGTTCAGGAAAGGGGAGCCGTTGTCCTCAAGGCTTTTGATG TGGAAAATCCGGGGCGATCGCCCATCGAAGTGGGAGATACTGGAGGGCTGGCCCAGGGGATGCTGAAGATTAATCTCAAT CCGGGTTGGCGCATGGCGAAACGCACCTACGAAGGAAAAACCCTGGGTCACATTTACCTCGCCAATGAACGACCCCGCGA CCAATTGGTTGCTGCCGATCCCCGACAGGAATGGGTTGCAACGGCGCCCACCACCTATACCAGTAGCAAAATCACCGAAA AATCGGTCTCTGGCAGCGAAACAATTCAGATTTTTGTGCCTCCCTACCAAGAAACCACCAGTCGCCCGAACGAAACCCTC GTGGCGGCGATTACAGTTCCCGCAGCTCCTGAACCCATCGTGAGTCTACCGAGCAATCCCAGCAATCCCAACGTTCTCCC TGTCCCCCAACGCTCTATCCCCACCTACAGTTCCAGTAACACCGGGGTCATTCGCCTTGAAGAACCCGGTCAACAACCGC CGCCGCCGCCCAATAGCGTTTCCTTGGCCCAGAGCTTAGGTTTGCGGTACCGGGTGGTGGTTGATGCCCAAACTCCAGAA CAAAAAGAACGGTTAAAGGCTGTGATTCCGGATGCGTTTCATACTTGGGTTGGCGATCGCCGGATGATGCAAGCCGGGGC CTTCGCCGCCGAATTTGAAGCCCAAGATCTGCAAATGCGCTTGCGAGAAACGGGTCTAGCGGTACAAATTGTCCCTGTGC AGTAA
Upstream 100 bases:
>100_bases GATGGGAGAGGCAAAAGTCCGGTGCTAAAATGCTGGCAATTCTGAGCTTTCCCCCAGGGGAAAACCCAGGCCCATTGTTC GTTTTGGTGATGAGGATCAG
Downstream 100 bases:
>100_bases GTGATGGCAAATTTTTCAGAAATCTTTGTGGCGATCGCCGCTGACCCTTGGCAGGAGGTGGTTGACTTTTACCGTGGCCT CCTGAATGACGAACCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MNIRAGLTALGVSMATLGPISFAPIAQANSGLFGTQDLTPGDVVAIAVPLAGGEAYNLVILEQLDQNRACWREQGGSPTV IDPLLLQFDFTGICGRSTDSNGYSLRLGEQDMAWRYRLQLVQERGAVVLKAFDVENPGRSPIEVGDTGGLAQGMLKINLN PGWRMAKRTYEGKTLGHIYLANERPRDQLVAADPRQEWVATAPTTYTSSKITEKSVSGSETIQIFVPPYQETTSRPNETL VAAITVPAAPEPIVSLPSNPSNPNVLPVPQRSIPTYSSSNTGVIRLEEPGQQPPPPPNSVSLAQSLGLRYRVVVDAQTPE QKERLKAVIPDAFHTWVGDRRMMQAGAFAAEFEAQDLQMRLRETGLAVQIVPVQ
Sequences:
>Translated_374_residues MNIRAGLTALGVSMATLGPISFAPIAQANSGLFGTQDLTPGDVVAIAVPLAGGEAYNLVILEQLDQNRACWREQGGSPTV IDPLLLQFDFTGICGRSTDSNGYSLRLGEQDMAWRYRLQLVQERGAVVLKAFDVENPGRSPIEVGDTGGLAQGMLKINLN PGWRMAKRTYEGKTLGHIYLANERPRDQLVAADPRQEWVATAPTTYTSSKITEKSVSGSETIQIFVPPYQETTSRPNETL VAAITVPAAPEPIVSLPSNPSNPNVLPVPQRSIPTYSSSNTGVIRLEEPGQQPPPPPNSVSLAQSLGLRYRVVVDAQTPE QKERLKAVIPDAFHTWVGDRRMMQAGAFAAEFEAQDLQMRLRETGLAVQIVPVQ >Mature_374_residues MNIRAGLTALGVSMATLGPISFAPIAQANSGLFGTQDLTPGDVVAIAVPLAGGEAYNLVILEQLDQNRACWREQGGSPTV IDPLLLQFDFTGICGRSTDSNGYSLRLGEQDMAWRYRLQLVQERGAVVLKAFDVENPGRSPIEVGDTGGLAQGMLKINLN PGWRMAKRTYEGKTLGHIYLANERPRDQLVAADPRQEWVATAPTTYTSSKITEKSVSGSETIQIFVPPYQETTSRPNETL VAAITVPAAPEPIVSLPSNPSNPNVLPVPQRSIPTYSSSNTGVIRLEEPGQQPPPPPNSVSLAQSLGLRYRVVVDAQTPE QKERLKAVIPDAFHTWVGDRRMMQAGAFAAEFEAQDLQMRLRETGLAVQIVPVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40522; Mature: 40522
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRAGLTALGVSMATLGPISFAPIAQANSGLFGTQDLTPGDVVAIAVPLAGGEAYNLVI CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEE LEQLDQNRACWREQGGSPTVIDPLLLQFDFTGICGRSTDSNGYSLRLGEQDMAWRYRLQL EEECCCCHHHHHHCCCCCCEECCEEEEEECCEECCCCCCCCCEEEEECCCHHHHHHHHHH VQERGAVVLKAFDVENPGRSPIEVGDTGGLAQGMLKINLNPGWRMAKRTYEGKTLGHIYL HHCCCCEEEEEEECCCCCCCCCEECCCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEEEE ANERPRDQLVAADPRQEWVATAPTTYTSSKITEKSVSGSETIQIFVPPYQETTSRPNETL ECCCCCCCEEECCCHHHEEEECCCCCCCCCCHHCCCCCCCEEEEEECCCHHHCCCCCCEE VAAITVPAAPEPIVSLPSNPSNPNVLPVPQRSIPTYSSSNTGVIRLEEPGQQPPPPPNSV EEEEECCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCH SLAQSLGLRYRVVVDAQTPEQKERLKAVIPDAFHTWVGDRRMMQAGAFAAEFEAQDLQMR HHHHHCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHCCCHHHHHHCCEEECCCHHHHHHH LRETGLAVQIVPVQ HHHCCCEEEEEECC >Mature Secondary Structure MNIRAGLTALGVSMATLGPISFAPIAQANSGLFGTQDLTPGDVVAIAVPLAGGEAYNLVI CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEE LEQLDQNRACWREQGGSPTVIDPLLLQFDFTGICGRSTDSNGYSLRLGEQDMAWRYRLQL EEECCCCHHHHHHCCCCCCEECCEEEEEECCEECCCCCCCCCEEEEECCCHHHHHHHHHH VQERGAVVLKAFDVENPGRSPIEVGDTGGLAQGMLKINLNPGWRMAKRTYEGKTLGHIYL HHCCCCEEEEEEECCCCCCCCCEECCCCCCCCCEEEEECCCCHHHHHHCCCCCEEEEEEE ANERPRDQLVAADPRQEWVATAPTTYTSSKITEKSVSGSETIQIFVPPYQETTSRPNETL ECCCCCCCEEECCCHHHEEEECCCCCCCCCCHHCCCCCCCEEEEEECCCHHHCCCCCCEE VAAITVPAAPEPIVSLPSNPSNPNVLPVPQRSIPTYSSSNTGVIRLEEPGQQPPPPPNSV EEEEECCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCH SLAQSLGLRYRVVVDAQTPEQKERLKAVIPDAFHTWVGDRRMMQAGAFAAEFEAQDLQMR HHHHHCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHCCCHHHHHHCCEEECCCHHHHHHH LRETGLAVQIVPVQ HHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA