| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077323
Identifier: 170077323
GI number: 170077323
Start: 730750
End: 731307
Strand: Direct
Name: 170077323
Synonym: SYNPCC7002_A0700
Alternate gene names: NA
Gene position: 730750-731307 (Clockwise)
Preceding gene: 170077322
Following gene: 170077326
Centisome position: 24.29
GC content: 49.82
Gene sequence:
>558_bases ATGACCGGACAGCAAAGTCAGTATGAAACGCTTTTAGCGGCCTACAGTGATCGACAAACGGCGATCGCCTTACTGAAGCA ACATCGCCCTTACCTTTCTTTGGTACCCAGTGTCCGGCGTCCTGAGGGGAGTTTAATTGTGATGCCGCTGCCGGTGATGC GCCACCTCAGCAGAAATGAACAGCATTCCACTCCAAAAACCTTAATTTTGCCCTGTGATCTGGCGATTTTGACCTGTGAT CCGGAGTGGCAAATTAAGCTAGATGCCGAAATTATGGTGTTTATCCATCGGCCTGGGGAAACTTTTTCAGAGCTATTGCT GCGCTGGCGTCATACCCAGGTTTACCTTGATCAAGATTACGAGTGGTTAATGCCAGAGTCGGAGGCCCACATGATCAGTA ATCTTCCGGCCCAAATTCACCCTTTGTTTGTGGTGTTCCCGACAACCCCTGAGCACATTATTAAGGGACTTACGGGGGCG CATCTCCCCTTTGTCCTGGGGGAATCACCGTTTCCTGAACCGGAGTCTGTACCTGAGGTTTTTGTTACGGGAAATTAA
Upstream 100 bases:
>100_bases CAGCGATGATGGTGATTATTGCAGCGATGGTTGGTGTTATTTTGCTATCGATGTATCTGCCGATGTTTAAGGTATTTGAA GATTTGGGTTAGAACAAACG
Downstream 100 bases:
>100_bases TGGCTGAGAAATTCGGCAATGGCTTGGGCGATCGCCTTTGTGCCCGTCTTATCGATGGGTTGATTGCCTTGGGGCGGTTG GGGTGATTCCCGGAGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTGQQSQYETLLAAYSDRQTAIALLKQHRPYLSLVPSVRRPEGSLIVMPLPVMRHLSRNEQHSTPKTLILPCDLAILTCD PEWQIKLDAEIMVFIHRPGETFSELLLRWRHTQVYLDQDYEWLMPESEAHMISNLPAQIHPLFVVFPTTPEHIIKGLTGA HLPFVLGESPFPEPESVPEVFVTGN
Sequences:
>Translated_185_residues MTGQQSQYETLLAAYSDRQTAIALLKQHRPYLSLVPSVRRPEGSLIVMPLPVMRHLSRNEQHSTPKTLILPCDLAILTCD PEWQIKLDAEIMVFIHRPGETFSELLLRWRHTQVYLDQDYEWLMPESEAHMISNLPAQIHPLFVVFPTTPEHIIKGLTGA HLPFVLGESPFPEPESVPEVFVTGN >Mature_184_residues TGQQSQYETLLAAYSDRQTAIALLKQHRPYLSLVPSVRRPEGSLIVMPLPVMRHLSRNEQHSTPKTLILPCDLAILTCDP EWQIKLDAEIMVFIHRPGETFSELLLRWRHTQVYLDQDYEWLMPESEAHMISNLPAQIHPLFVVFPTTPEHIIKGLTGAH LPFVLGESPFPEPESVPEVFVTGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21113; Mature: 20981
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGQQSQYETLLAAYSDRQTAIALLKQHRPYLSLVPSVRRPEGSLIVMPLPVMRHLSRNE CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCEEEECHHHHHHHCCCC QHSTPKTLILPCDLAILTCDPEWQIKLDAEIMVFIHRPGETFSELLLRWRHTQVYLDQDY CCCCCCEEEEECCEEEEEECCCEEEEECCEEEEEEECCCHHHHHHHHHHHCEEEEECCCC EWLMPESEAHMISNLPAQIHPLFVVFPTTPEHIIKGLTGAHLPFVLGESPFPEPESVPEV EECCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCCCCEEECCCCCCCCCCCCEE FVTGN EEECC >Mature Secondary Structure TGQQSQYETLLAAYSDRQTAIALLKQHRPYLSLVPSVRRPEGSLIVMPLPVMRHLSRNE CCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCEEEECHHHHHHHCCCC QHSTPKTLILPCDLAILTCDPEWQIKLDAEIMVFIHRPGETFSELLLRWRHTQVYLDQDY CCCCCCEEEEECCEEEEEECCCEEEEECCEEEEEEECCCHHHHHHHHHHHCEEEEECCCC EWLMPESEAHMISNLPAQIHPLFVVFPTTPEHIIKGLTGAHLPFVLGESPFPEPESVPEV EECCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCCCCEEECCCCCCCCCCCCEE FVTGN EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA